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51.
Genetic analysis and characterization of a new maize association mapping panel for quantitative trait loci dissection 总被引:3,自引:0,他引:3
Xiaohong Yang Jianbing Yan Trushar Shah Marilyn L. Warburton Qing Li Lin Li Yufeng Gao Yuchao Chai Zhiyuan Fu Yi Zhou Shutu Xu Guanghong Bai Yijiang Meng Yanping Zheng Jiansheng Li 《TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik》2010,121(3):417-431
Association mapping based on the linkage disequilibrium provides a promising tool to identify genes responsible for quantitative variations underlying complex traits. Presented here is a maize association mapping panel consisting of 155 inbred lines with mainly temperate germplasm, which was phenotyped for 34 traits and genotyped using 82 SSRs and 1,536 SNPs. Abundant phenotypic and genetic diversities were observed within the panel based on the phenotypic and genotypic analysis. A model-based analysis using 82 SSRs assigned all inbred lines to two groups with eight subgroups. The relative kinship matrix was calculated using 884 SNPs with minor allele frequency ≥20% indicating that no or weak relationships were identified for most individual pairs. Three traits (total tocopherol content in maize kernel, plant height and kernel length) and 1,414 SNPs with missing data <20% were used to evaluate the performance of four models for association mapping analysis. For all traits, the model controlling relative kinship (K) performed better than the model controlling population structure (Q), and similarly to the model controlling both population structure and relative kinship (Q + K) in this panel. Our results suggest this maize panel can be used for association mapping analysis targeting multiple agronomic and quality traits with optimal association model. 相似文献
52.
尾叶桉人工林生物量和生产力的研究 总被引:24,自引:0,他引:24
按径级标准木法测定了尾叶桉(Eucalyptus urophylla)器官生物量,建立了林木器官干重(w)与胸径和树高(D^3H)关系的相对生长方程,进而计算出尾叶桉林分的生物量和生产力。结果表明:东门林场10年生尾叶桉人工林平均生物量为144.85t hm^2,各器官生物量的在小序列为:干材(71.69%)〉根(14.21%)〉皮)7.99%)〉枝(4.71%)〉叶(4.71%)〉叶(1.40% 相似文献
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A reinvestigation of the alphatic nitro-compounds in Astragalus canadensis resulted in the identification of two new esters of glucose with 3-nitropropanoic acid and 5-oxotetrahydrofuran-3-acetic acid, together with six known conjugates of 3-nitropropanoic acid. 1H and 13CNMR data are reported for the new compounds. 相似文献
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Ti Dongdong Bai Miaomiao Li Xiaolei Wei Jianshu Chen Deyun Wu Zhiqiang Wang Yao Han Weidong 《中国科学:生命科学英文版》2021,64(3):363-371
Impaired tumor-specific effector T cells contribute to tumor progression and unfavorable clinical outcomes. As a compensatory T cell-dependent cancer immunoediting strategy, adoptive T cell therapy(ACT) has achieved encouraging therapeutic results,and this strategy is now on the center stage of cancer treatment and research. ACT involves the ex vivo stimulation and expansion of tumor-infiltrating lymphocytes(TILs) with inherent tumor reactivity or T cells that have been genetically modified to express the cognate chimeric antigen receptor or T cell receptor(CAR/TCR), followed by the passive transfer of these cells into a lymphodepleted host. Primed T cells must provide highly efficient and long-lasting immune defense against transformed cells during ACT. Anin-depth understanding of the basic mechanisms of these living drugs can help us improve upon current strategies and design better next-generation T cell-based immunotherapies. From this perspective, we provide an overview of current developments in different ACT strategies, with a focus on frontier clinical trials that offer a proof of principle. Meanwhile, insights into the determinants of ACT are discussed, which will lead to more rational, potent and widespread applications in the future. 相似文献
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Yong-Xin Liu Yuan Qin Tong Chen Meiping Lu Xubo Qian Xiaoxuan Guo Yang Bai 《蛋白质与细胞》2021,12(5):315-330
Advances in high-throughput sequencing(HTS)have fostered rapid developments in the field of microbiome research,and massive microbiome datasets are now being generated.However,the diversity of software tools and the complexity of analysis pipelines make it difficult to access this field.Here,we systematically summarize the advantages and limitations of micro-biome methods.Then,we recommend specific pipelines for amplicon and metagenomic analyses,and describe commonly-used software and databases,to help researchers select the appropriate tools.Furthermore,we introduce statistical and visualization methods suit-able for microbiome analysis,including alpha-and beta-diversity,taxonomic composition,difference compar-isons,correlation,networks,machine learning,evolu-tion,source tracing,and common visualization styles to help researchers make informed choices.Finally,a step-by-step reproducible analysis guide is introduced.We hope this review will allow researchers to carry out data analysis more effectively and to quickly select the appropriate tools in order to efficiently mine the bio-logical significance behind the data. 相似文献
58.
Yi Guo Dandan Bai Wenqiang Liu Yingdong Liu Yalin Zhang Xiaochen Kou Jiayu Chen Hong Wang Xiaoming Teng Ji Zuo Shaorong Gao 《Aging cell》2021,20(9)
Parental age at first pregnancy is increasing worldwide. The offspring of aged father has been associated with higher risk of several neuropsychiatric disorders, such as schizophrenia and autism, but the underlying mechanism remains elusive. Here we report that advanced paternal age in mice alters the profile of transfer RNA‐derived small RNAs (tsRNAs). Injection of sperm tsRNAs from aged male mice into zygotes induced anxiety‐like behaviors in F1 males. RNA sequencing of the cerebral cortex and hippocampus of those F1 male mice altered the gene expression of dopaminergic synapse and neurotrophin. tsRNAs from aged male mice injection also altered the neuropsychiatry‐related gene expression in two‐cell and blastocyst stage embryos. More importantly, the sperm tsRNA profile changes significantly during aging in human. The up‐regulated sperm tsRNA target genes were involved in neurogenesis and nervous system development. These results suggest that aging‐related changes of sperm tsRNA may contribute to the intergenerational transmission of behavioral traits. 相似文献
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Science China Life Sciences - 相似文献
60.
Shen He Wu Shuyu Chen Xi Xu Bai Ma Dezun Zhao Yannan Zhuang Yan Chen Bing Hou Xianglin Li Jiayin Cao Yudong Fu Xianyong Tan Jun Yin Wen Li Juan Meng Li Shi Ya Xiao Zhifeng Jiang Xingjun Dai Jianwu 《中国科学:生命科学英文版》2020,63(12):1879-1886
Science China Life Sciences - Spinal cord injury (SCI), especially complete transected SCI, leads to loss of cells and extracellular matrix and functional impairments. In a previous study, we... 相似文献