Synaptophysin: molecular organization and mRNA expression as determined from cloned cDNA

Synaptophysin is a major glycoprotein of Mr approximately 38,000 (in deglycosylated form: Mr approximately 34,000) characteristic of a certain class of small (30-80 nm diameter) neurosecretory vesicles, including presynaptic vesicles, but also vesicles of various neuroendocrine cells of both neuronal and epithelial phenotype. Using synaptophysin-specific antibodies we have isolated cDNA clones from rat nervous tissue libraries, which identify an approximately 2.5-kb mRNA in rat and human cells, including neuroendocrine tumours, that contains a reading frame for a polypeptide of 307 amino acids with a total mol. wt of 33 312. The deduced amino acid sequence, which was partly confirmed by comparison with sequences of two tryptic peptides obtained from purified synaptophysin, revealed four hydrophobic regions of 24 amino acids each, which are characterized, according to conformation prediction analyses, by marked alpha-helicity. The sequence shows a single potential N-glycosylation site, which is assigned to the vesicle interior, and a carboxy-terminal tail of 89 amino acids which contains glycine-rich tetrapeptide repeats, the epitope of monoclonal antibody SY38, and a number of collagenase-sensitive sites accessible on the surface of the intact vesicles. These features suggest that the polypeptide spans the vesicle membrane four times, with both N and C termini located on the outer, i.e. cytoplasmic, surface of the vesicles.     

Formation and degradation of Δ9-1,18-octadecenedioic acid from oleic acid by Candida tropicalis

Summary The formation and degradation of ⁹-1,18-octadecenedioic acid from oleic acid by mutant S ₇₆ of Candida tropicalis was studied. It was found that the mutant could convert oleic acid to ⁹-1,18-octadecenedioic acid by -oxidation of the terminal methyl group. The substance was identified by various analytical methods and could be degraded to unsaturated dioic acids of shorter chain length with even numbers of carbon atoms from 6 to 16, and saturated dioic acids with 6, 8 and 10 carbon atoms. Neither unsaturated nor saturated dioic acids with odd numbers of carbon atoms were found in the media. From these results some metabolic pathways of the degradation of this unsaturated dioic acid are proposed. Some mass spectra of unsaturated dioic acids are presented.     

Fractionation of synaptophysin-containing vesicles from rat brain and cultured PC12 pheochromocytoma cells

Synaptophysin is a transmembrane glycoprotein of neuroendocrine vesicles. Its content and distribution in subcellular fractions from cultured PC12 cells, rat brain and bovine adrenal medulla were determined by a sensitive dot immunoassay. Synaptophysin-containing fractions appeared as monodispersed populations similar to synaptic vesicles in density and size distribution. Membranes from synaptic vesicles contained approximately 100-times more synaptophysin than chromaffin granules. In conclusion, synaptophysin is located almost exclusively in vesicles of brain and PC12 cells which are distinct from dense core granules.     

Biochemical Properties and Substrate Specificities of a Recombinantly Produced Azotobacter vinelandii Alginate Lyase

Alginate is a polysaccharide composed of β-d-mannuronic acid (M) and α-l-guluronic acid (G). An Azotobacter vinelandii alginate lyase gene, algL, was cloned, sequenced, and expressed in Escherichia coli. The deduced molecular mass of the corresponding protein is 41.4 kDa, but a signal peptide is cleaved off, leaving a mature protein of 39 kDa. Sixty-three percent of the amino acids in this mature protein are identical to those in AlgL from Pseudomonas aeruginosa. AlgL was partially purified, and the activity was found to be optimal at a pH of 8.1 to 8.4 and at 0.35 M NaCl. Divalent cations are not necessary for activity. The pI of the enzyme is 5.1. When an alginate rich in mannuronic acid was used as the substrate, the K_m was found to be 4.6 × 10⁻⁴ M (sugar residues). AlgL was found to cleave M-M and M-G bonds but not G-M or G-G bonds. Bonds involving acetylated residues were also cleaved, but this activity may be sensitive to the extent of acetylation.

Alginate is a family of 1-4-linked copolymers of β-d-mannuronic acid (M) and α-l-guluronic acid (G). It is produced by brown algae and by some bacteria belonging to the genera Azotobacter and Pseudomonas (8, 17, 18, 31). The polymer is widely used in industry and biotechnology (36, 44), and the genetics of its biosynthesis in Pseudomonas aeruginosa has been extensively studied due to its role in the disease cystic fibrosis (33). In bacterial alginates, some of the M residues may be O-2- and/or O-3-acetylated (42). The polymer is initially synthesized as mannuronan, and the G residues are introduced at the polymer level by mannuronan C-5-epimerases (13, 22, 23). The epimerized alginates contain a mixture of blocks of consecutive G residues (G blocks), consecutive M residues (M blocks), and alternating M and G residues (MG blocks). Alginates from Pseudomonas sp. do not contain G blocks (42).Alginate lyases catalyze the depolymerization of alginates by β-elimination, generating a molecule containing 4-deoxy-l-erythro-hex-4-enepyranosyluronate at the nonreducing end. Such lyases have been found in organisms using alginate as a carbon source, in bacteriophages specific for alginate-producing organisms, and in alginate-producing bacteria (45). An alginate molecule may contain four different glycosidic bonds, M-M, G-M, M-G, or G-G, and the relative rates at which each of these bonds are cleaved vary among different lyases (36a). The lyases also differ in the extent to which they are affected by acetylation (35, 43, 46).Davidson et al. (10) described an Azotobacter vinelandii lyase which preferred M blocks as a substrate. Kennedy et al. (28) later reported the purification of periplasmic alginate lyases from A. vinelandii and from Azotobacter chroococcum which also seemed to prefer deacetylated, M-rich alginate. The activities of these enzymes were found to be optimal at pH 6.8 and 7.2, respectively, while the enzyme reported by Davidson et al. (10) was found to display optimal activity at pH 7.8.A gene, algL, encoding an alginate lyase has been cloned from P. aeruginosa (2, 41). The gene was found to be located in a cluster containing most of the genes necessary for the biosynthesis of alginate. A homologous gene cluster has recently been identified in A. vinelandii (38) and shown to encode an alginate lyase (32). In our previous report, we showed that plasmid pHE102, which contains a part of this gene cluster, contains a DNA sequence sharing homology with algL from P. aeruginosa (38). We have now subcloned, sequenced, and expressed this gene in Escherichia coli. The lyase was shown to preferentially cleave deacetylated M-M and M-G bonds, but acetylated substrates were also cleaved.     

Degradation of 2-chloroethanol by free and immobilized Pseudomonas putida US 2

The degradation of 2-chloroethanol by Pseudomonas putida US 2 was investigated in shaking flasks, air-bubble columns and packed-bed fermenters by free cells, calcium-alginate-entrapped cells and on cells on granular clay adsorbed. Entrapped cells tolerated increasing concentrations of 2-chloroethanol better than free cells. Their maximum degradative activity could be observed at 34°C and pH 7.0. The degradation of 2-chloroethanol leads to a decrease of pH and to a stagnation of mineralization, particularly with free or entrapped cells. Following the stabilization of pH, supplementation with succinate resulted in a complete degradation of higher 2-chloroethanol concentrations. Less 2-chloroethanol was degraded in air-bubble columns and larger amounts in packed-bed fermenters. 2-Chloroethanol was mineralized faster by free or entrapped P. putida US 2 than by adsorbed cells, which, on the other hand, were able to remove higher concentrations of the compound. The results with P. putida US 2 are a good indication that this microorganism could be used in waste-water treatment and soil-decontamination systems.     

Oxidation of n-alkanes by citric acid producingCandida spp.

Summary Microbial oxidation and assimilation of n-tetradecane by two citric acid-producingCandida sp. (a wild typeCandida sp. KSH 21 and mutant from this strain No. 337) were studied.A monoterminal oxidation of n-tetradecane can be observed due to the isolation of 1-tetradecanol and myristic acid.Among the fatty acids detected from the culture fluid and in the cells the even-numbered dominate.No fatty acids with an odd number of carbon atoms could be isolated in the cells.A direct desaturation of myristic acid in the cells can be demonstrated by the presence of tetradecenoic acid.Beside monoterminal oxidation, diterminal oxidation can be observed by the appearance of tetradecanedioic acid. Dioic acids with an odd number of carbons can also be identified.Furthermore very many short chain dioic acids could be found in contrast to cultures grown on glucose and to other noncitric acid-producing species ofCandida.Substances which are supposed to be diols (1,14-tetradecanediol etc.) could be isolated in very small concentration from fermenter culture fluids of both strains.Prof. Dr. Wilhelm Schwartz dedicated to his 80th birthday.     

Die Resistenz von Dekalin gegenüber mikrobiellem Abbau

Zusammenfassung Es gelang nicht, Dekalin durch mehr als 50 verschiedene Flavobacterium-, Micrococcus-Arthrobacter- und Corynebacterium-Stämme, sowie Stämmen, die aus 250 Bodenproben isoliert worden waren, zu oxidieren. Auch eine Cooxidation des Dekalins war nicht möglich. Mit verschiedenen gaschromatographischen Methoden gelang es nicht, irgendwelche Abbauprodukte festzustellen.

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Resistance of decalin against microbiological oxidation

Summary We succeeded not in oxidizing decalin by more than 50 different strains of Flavobacterium, Micrococcus, Arthrobacter and Corynebacterium, as well as by strains, which were isolated from 250 samples of soil. A cooxidation of decalin was not possible also. We were not able to determine any products of decomposition with various gaschromatographical methods.

     

Effect of reduced pH in absence of HCO3− on anomalous and normal potential responses in bullfrog antrum

Effect of changing [K⁺], [Na⁺] and [Cl^?] in nutrient solution on potential difference (PD) and resistance was studied in bullfrog antrum with and without nutrient HCO₃^? but with 95% O₂/5% CO₂ in both cases. In both cases, changing from 4 to 40 mM K⁺ gave about the same initial PD maximum (anomalous response) which was followed by a decrease below control level. Latter effect was much less with zero than with 25 mM HCO₃^?. Changing from 102 to 8 mM Na⁺ gave initial normal PD response about the same in both cases. However, 10 min later the change in PD with zero HCO₃^? was insignificant but with 25 mM HCO₃^? the PD decreased (anomalous response of electrogenic NaCl symport). PD maxima due to K⁺ and Na⁺ were largely related to ($\text{Na}{}^{\mathrm{+}}\text{+}\text{K}{}^{\mathrm{+}}\text{)-}\text{ATPase}$ pump. Changes in nutrient Cl^? from 81 to 8.1 mM gave only a decrease in PD (normal response). Initial PD increases are explained by relative increases in resistance of simple conductance pathways and of parallel pathways of ($\text{Na}{}^{\mathrm{+}}\text{+}\text{K}{}^{\mathrm{+}}\text{)-}\text{ATPase}$ pump and Na⁺/Cl^? symport. Removal of HCO₃^? and concurrent reduction of pH modify resistance of these pathways.