Vole population dynamics: factors affecting peak densities and amplitudes of annual population fluctuations of<Emphasis Type="Italic">Microtus pennsylvanicus</Emphasis>

We studied factors affecting peak densities and amplitudes of fluctuation during 20 annual population fluctuations ofMicrotus pennsylvanicus Ord, 1815 in alfalfa and bluegrass habitats over a 25-year period. Survival was correlated with population density over the 25 years and was the most consistent variable associated with stoppage of population growth. Although not correlated with population density over the 25 years, a decline in the proportion of reproductively active adult females contributed to cessation of growth of population fluctuations that peaked in late autumn-winter, and to cessation of growth of eight of eleven population fluctuations that peaked during summer-early autumn. We conclude variation in survival to be the primary factor affecting peak densities and amplitudes of population fluctuation ofM. pennsylvanicus.     

Chromosomes of five artiodactyl mammals

Somatic chromosomes of six specimens belonging to the following five species of artiodactyls (Artiodactyla: Mammalia) are described: A female nilgai (Boselaphus tragocamelus), 2n=46; male baresingha (Rucervus duvauceli), two specimens, 2n=56; a female Himalayan tahr (Hemitragus jemlahicus), 2n=48; a female Kirk's dik-dik (Rhynchotragus kirki), 2n=46; and a male sambar (Cervus unicolor), 2n=58. In the baresingha and the sambar, one or more acrocentric chromosomes carried satellites on their long arms. ³H-thymidine radioautographs of cultured cells of the Himalayan tahr showed a long acrocentric chromosome to be late-replicating, suggesting that it is an X chromosome.     

The use of on‐animal acoustical recording devices for studying animal behavior

Audio recordings made from free‐ranging animals can be used to investigate aspects of physiology, behavior, and ecology through acoustic signal processing. On‐animal acoustical monitoring applications allow continuous remote data collection, and can serve to address questions across temporal and spatial scales. We report on the design of an inexpensive collar‐mounted recording device and present data on the activity budget of wild mule deer (Odocoileus hemionus) derived from these devices applied for a 2‐week period. Over 3300 h of acoustical recordings were collected from 10 deer on their winter range in a natural gas extraction field in northwestern Colorado. Analysis of a subset of the data indicated deer spent approximately 33.5% of their time browsing, 20.8% of their time processing food through mastication, and nearly 38.3% of their time digesting through rumination, with marked differences in diel patterning of these activities. Systematic auditory vigilance was a salient activity when masticating, and these data offer options for quantifying wildlife responses to varying listening conditions and predation risk. These results (validated using direct observation) demonstrate that acoustical monitoring is a viable and accurate method for characterizing individual time budgets and behaviors of ungulates, and may provide new insight into the ways external forces affect wildlife behavior.     

Current review of in vivo GBM rodent models: emphasis on the CNS-1 tumour model

GBM (glioblastoma multiforme) is a highly aggressive brain tumour with very poor prognosis despite multi-modalities of treatment. Furthermore, recent failure of targeted therapy for these tumours highlights the need of appropriate rodent models for preclinical studies. In this review, we highlight the most commonly used rodent models (U251, U86, GL261, C6, 9L and CNS-1) with a focus on the pathological and genetic similarities to the human disease. We end with a comprehensive review of the CNS-1 rodent model.     

Inferring the geographic origin of a range expansion: Latitudinal and longitudinal coordinates inferred from genomic data in an ABC framework with the program x‐origin

Climatic or environmental change is not only driving distributional shifts in species today, but it has also caused distributions to expand and contract in the past. Inferences about the geographic locations of past populations especially regions that served as refugia (i.e., source populations) and migratory routes are a challenging endeavour. Refugial areas may be evidenced from fossil records or regions of temporal stability inferred from ecological niche models. Genomic data offer an alternative and broadly applicable source of information about the locality of refugial areas, especially relative to fossil data, which are either unavailable or incomplete for most species. Here, we present a pipeline we developed (called x ‐origin ) for statistically inferring the geographic origin of range expansion using a spatially explicit coalescent model and an approximate Bayesian computation testing framework. In addition to assessing the probability of specific latitudinal and longitudinal coordinates of refugial or source populations, such inferences can also be made accounting for the effects of temporal and spatial environmental heterogeneity, which may impact migration routes. We demonstrate x ‐origin with an analysis of genomic data collected in the Collared pika that underwent postglacial expansion across Alaska, as well as present an assessment of its accuracy under a known model of expansion to validate the approach.     

Structural basis for the Smad5 MH1 domain to recognize different DNA sequences

Smad proteins are important intracellular mediators of TGF-β signalling, which transmit signals directly from cell surface receptors to the nucleus. The MH1 domain of Smad plays a key role in DNA recognition. Two types of DNA sequence were identified as Smad binding motifs: the Smad binding element (SBE) and the GC-rich sequence. Here we report the first crystal structure of the Smad5 MH1 domain in complex with the GC-rich sequence. Compared with the Smad5-MH1/SBE complex structure, the Smad5 MH1 domain contacts the GC-rich site with the same β-hairpin, but the detailed interaction modes are different. Conserved β-hairpin residues make base specific contacts with the minimal GC-rich site, 5′-GGC-3′. The assembly of Smad5-MH1 on the GC-rich DNA also results in distinct DNA conformational changes. Moreover, the crystal structure of Smad5-MH1 in complex with a composite DNA sequence demonstrates that the MH1 domain is targeted to each binding site (GC-rich or SBE) with modular binding modes, and the length of the DNA spacer affects the MH1 assembly. In conclusion, our work provides the structural basis for the recognition and binding specificity of the Smad MH1 domain with the DNA targets.