Meta-Analysis of the Effect of Excluding Early Deaths on the Estimated Relationship between Body Mass Index and Mortality

ALLISON, DAVID B., MYLES S. FAITH, MOONSEONG HEO, DIANA TOWNSEND-BUTTERWORTH, AND DAVID F. WILLIAMSON. Meta-analysis of the effect of excluding early deaths on the estimated relationship between body mass index and mortality. Obes Res. Objectives: Prospective cohort studies typically observe U-or J-shaped relationships between body mass index (BMI) (kg/m²) and mortality. However, some studies suggest that the elevated mortality at lower BMIs is due to confounding by pre-existing occult disease and recommend eliminating subjects who die during the first several (k) years of follow-up. This meta-analysis tests the effects of such early death exclusion on the BMI-mortality association. Research Methods and Procedures: Studies identified from MEDLINE, review articles, ancestry analyses, and the “invisible college.” Included studies: 1) measured relative body weight at baseline; 2) inchded at least 1000 subjects; 3) reported results with and without early-death exclusion, or relevant data; and 4) did not study exclusively diseased populations. Blank tables were mailed to 131 investigators covering 59 databases. Completed tables (n = 16 databases), electronic raw data (n = 7 databases), and original articles (n = 6 databases) provided final data. Meta-analytic regressions compared the BMI-mortality association with and without early death exclusion. The sample included 29 studies and 1,954,345 subjects. Results: The effect of eliminating early deaths was statistically significant but minuscule in magnitude. Implementation of early death exclusion was estimated to shift the BMI associated with minimum mortality only 0. 4 units for men and 0. 6 units for women at age 50. Even at a BMI 16, the estimated relative risk (compared to BMI 25) decreased only 0. 008 units for men and 0. 076 units for women at age 50. Discussion: Results indicate that either pre-existing disease does not confound the BMI—mortality association or eliminating early deaths is inefficient for reducing that confounding.     

Production of adipic acid by short- and long-chain fatty acid acyl-CoA oxidase engineered in yeast Candida tropicalis

Bioprocess and Biosystems Engineering - In this study, to produce adipic acid, mutant strains of Candida tropicalis KCTC 7212 deficient of AOX genes encoding acyl-CoA oxidases which are important...     

Comparison of the MicroScan,VITEK 2, and Crystal GP with 16S rRNA sequencing and MicroSeq 500 v2.0 analysis for coagulase-negative Staphylococci

Background  

Three phenotypic identification systems (MicroScan, VITEK 2, and Crystal GP) were evaluated for their accuracy to identify coagulase-negative staphylococci (CNS). A total of 120 clinical isolates confirmed to be CNS via 16S rRNA sequencing and analysis with the MicroSeq 500 v2.0 database were assessed.     

Distinct gene expression signatures during development of distant metastasis

Using cDNA microarrays, we have conducted a systematic characterization of global gene expression in v-raf or v-raf/v-myc transformed rat liver epithelial (RLE) cell lines exhibiting both non-metastatic and metastatic phenotypes. Seven transformed cell lines were compared with the non-transformed parental RLE cell. The hierarchical clustering analysis of gene expression profiles revealed two groups reflecting the in vivo metastatic potential of the cells. Surprisingly, one non-metastatic cell line T1 was co-clustered with metastatic cell lines, suggesting that T1 underwent significant genetic changes. The T1 cell line was further compared against all the metastatic cell lines in order to reveal the critical genes required for metastatic conversion but not expressed in the T1. These data demonstrated that expression of genes involved in apoptosis and immune cell homing were altered in all metastatic cell lines. Survival of both intravasated cells in circulation systems and extravasated cells in a new tissue environment might be critical for the final step in the metastatic process. Our study provides gene expression signatures consistent with two critical events in the metastatic process, namely, the acquisition of early homing capacity and increased survival potential of the tumor cells.     

N‐acetylcysteine normalizes the urea cycle and DNA repair in cells from patients with Batten disease

Batten disease is an inherited disorder characterized by early onset neurodegeneration due to the mutation of the CLN3 gene. The function of the CLN3 protein is not clear, but an association with oxidative stress has been proposed. Oxidative stress and DNA damage play critical roles in the pathogenesis of neurodegenerative diseases. Antioxidants are of interest because of their therapeutic potential for treating neurodegenerative diseases. We tested whether N‐acetylcysteine (NAC), a well‐known antioxidant, improves the pathology of cells from patients with Batten disease. At first, the expression levels of urea cycle components and DNA repair enzymes were compared between Batten disease cells and normal cells. We used both mRNA expression levels and Western blot analysis. We found that carbamoyl phosphate synthetase 1, an enzyme involved in the urea cycle, 8‐oxoguanine DNA glycosylase 1 and DNA polymerase beta, enzymes involved in DNA repair, were expressed at higher levels in Batten disease cells than in normal cells. The treatment of Batten disease cells with NAC for 48 h attenuated activities of the urea cycle and of DNA repair, as indicated by the substantially decreased expression levels of carbamoyl phosphate synthetase 1, 8‐oxoguanine DNA glycosylase 1 and DNA polymerase beta proteins compared with untreated Batten cells. NAC may serve in alleviating the burden of urea cycle and DNA repair processes in Batten disease cells. We propose that NAC may have beneficial effects in patients with Batten disease. Copyright © 2012 John Wiley & Sons, Ltd.     

The effect of environmental micropollutant (DEET) on the expression of cell cycle and apoptosis regulatory proteins in human cells

N,N-diethyl-m-toluamide (DEET) is an insect repellent used worldwide, and a common micropollutant in aquatic environments. However, few studies have addressed the molecular mechanism of DEET toxicity and its effects on cell growth and apoptosis. The purpose of this study was to investigate the effect of DEET on the expression of the cell cycle and apoptosis regulatory proteins in human BE(2)-M17 cells. The results showed that DEET significantly decreased the cell viability (40.6 ∼ 68.9% of control) at concentrations of 500 ∼ 4,000 mg/L. Also, DEET significantly decreased the expressions of CDK 2, CDK 4, and cyclin D1 (3.9 ∼ 86.6% of control), at concentrations of 50 ∼ 400 mg/L but from 100 mg/L for cyclin E. Furthermore, DEET significantly increased the expression of caspase-3 (223.1 ∼ 1,770.6% of control), but significantly decreased Bcl-2 expression (46.1 ∼ 86.3% of control) at all concentrations tested. In conclusion, DEET partially affected the expression of CDK/cyclin molecules, but fully affected the expressions of caspase-3 and Bcl-2 in BE(2)-M17 cells.