北部湾茅尾海无瓣海桑红树林地上生物量反演——基于XGBoost机器学习算法

无瓣海桑是广西从自治区外引进的外来红树林树种,采用定量化算法精确估算无瓣海桑地上生物量对红树林生态修复以及海洋蓝碳监测提供经验和方法。论文以广西茅尾海自然保护区无瓣海桑红树林为研究对象,以野外实测无瓣海桑红树林地上生物量数据和Sentinel-1/2卫星提取的后向散射数据、波段数据、植被指数数据和纹理指数数据为数据源,通过分析各遥感因子与实测红树林地上生物量之间的重要性关系,采用极端梯度提升(XGBoost)机器学习算法对比了不同的变量组合对模型精度的影响,最后基于优选的变量组合反演了无瓣海桑红树林的地上生物量。结果表明：(1)研究区无瓣海桑红树林实测树高范围为1.55—13.58m,平均值为8.37m,胸径范围为0.7—41cm,平均值为15.62cm;(2)通过XGBoost算法优选的21个特征变量组合模型拟合效果较好,其模型在测试阶段R²=0.7237,RMSE=21.70Mg/hm²。XGBoost算法反演研究区无瓣海桑地上生物量介于19.14—138.46Mg/hm²之间,平均值为51.92Mg/hm^...     

隆德鱼的新材料及其系统关系的初步分析——辽宁西部晚中生代地层和鱼群研究之一

依据辽宁西部三个地点的新材料和宁夏、内蒙古的标本,对罗家峡隆德鱼(Longdeichthys luojiaxiaensis Liu,1982)的形态特征作了补充描述和修订,并初步分析讨论了“薄鳞鱼类”的研究现状以及隆德鱼的系统关系。认为隆德鱼可能已是鲱头鱼派(Clupeocephala)的成员,与德国和法国基末里期的Leptolepides sprattiformis(Blainville)最为相近。     

植物乳杆菌谷氨酸脱羧酶催化pH范围的理性改造及高效转化生产g-氨基丁酸

γ-氨基丁酸可由谷氨酸脱羧酶(glutamate decarboxylase, GAD)催化谷氨酸一步合成,反应体系成分简单、环境友好。然而,绝大多数GAD酶催化pH偏酸性且反应范围狭小,需要加入无机盐维持最适催化环境,增加了生产附加成分。此外,随着产物γ-氨基丁酸的生成,溶液pH会逐渐上升,不利于GAD酶的持续转化。本研究首先从实验室保藏的一株高产γ-氨基丁酸的植物乳杆菌(Lactobacillus plantarum)中克隆得到谷氨酸脱羧酶LpGAD,基于酶蛋白表面电荷修饰,选择9个位点进行定点突变及组合突变,酶学性质表征结果显示三突变体LpGAD^{S24R/D88R/Y309K}在催化pH区间内酶活力整体提高,尤其拓宽了在偏中性pH 6.0下的酶活,为野生酶的1.68倍。接下来,通过分子动力学模拟解析了酶活提高的机理。此外,将Lpgad与Lpgad^{S24R/D88R/Y309K}突变基因分别在谷氨酸棒杆菌(Corynebacterium glutamicum) E01中过表达,通过优化确定了摇瓶最适转化条件为反应温度40 ℃,菌体量OD₆₀₀=20,底物L-谷氨酸100.0 g/L,5-磷酸吡哆醛添加量为100 μmol/L。5 L发酵罐中,不调节pH,通过分批投料底物L-谷氨酸,γ-氨基丁酸产量高达402.8 g/L,较对照菌株提高了1.63倍。本研究成功拓宽了LpGAD的pH催化范围及酶活,提高了γ氨基丁酸的转化效率,为实现其规模化工业生产奠定了基础。     

Functional data analysis with covariate-dependent mean and covariance structures

Functional data analysis has emerged as a powerful tool in response to the ever-increasing resources and efforts devoted to collecting information about response curves or anything that varies over a continuum. However, limited progress has been made with regard to linking the covariance structures of response curves to external covariates, as most functional models assume a common covariance structure. We propose a new functional regression model with covariate-dependent mean and covariance structures. Particularly, by allowing variances of random scores to be covariate-dependent, we identify eigenfunctions for each individual from the set of eigenfunctions that govern the variation patterns across all individuals, resulting in high interpretability and prediction power. We further propose a new penalized quasi-likelihood procedure that combines regularization and B-spline smoothing for model selection and estimation and establish the convergence rate and asymptotic normality of the proposed estimators. The utility of the developed method is demonstrated via simulations, as well as an analysis of the Avon Longitudinal Study of Parents and Children concerning parental effects on the growth curves of their offspring, which yields biologically interesting results.     

Partition of proteins in aqueous two-phase systems containing charged dextran or hydrophobic PEG

Summary The electrochemical effect of a charged dextran derivative and the hydrophobic effect of hydrophobic chain PEG derivative on partitioning of six types of proteins in PEG/dextran aqueous two-phase systems were investigated- When 1. 6%(w/w)DEAE-dextran was present in the system,the partition coefficient decreased quickly with increasing pH value;when 0. 4% (w/w)PEG pentadecanoic acid ester was present in the system, the partition coefficient of protein with strong hydrophobicity was greatly increased. The experimental results show that the influence of hydrocarbon chain PEG derivative on partition coefficient is closely related to the hydrophobicity of proteins.     

90d模拟失重大鼠动脉压力反射反应性的改变

本工作研究了90d模拟失重大鼠动脉压力反射反应性的改变。即以血管活性药物变动平均动脉压(MAP),并同时记录反射性心率(HR)变化,采用非线性曲线拟合方法,定量评价清醒大鼠的动脉压力反射反应性的特征参数的改变。同时还利用受体阻断实验,观察迷走和交感神经成分在压力反射活动中的贡献。结果表明:模拟失重大鼠MAP-HR反应曲线向右上方移位,心率低限坪值升高,血压调节范围变窄,静态工作点升高。当心得安阻断β受体后,悬吊组大鼠压力感受性心率反射的平均增益及心率反应范围均高于对照组,提示模拟失重大鼠反射活动中迷走作用增强。     

油茶籽饼抗真菌活性成分的研究

从油茶籽饼中已经分离得到一种新的抗真菌活性成分油茶皂甙A,被鉴定为齐墩果烷型的五环三萜皂甙,它的mp为258～260℃,[α]_D~(27)=-20°(C=1％,80％EtOH),体外试验研究表明油茶皂甙A有较强的抑制真菌作用,对红包毛癣菌、石膏样癣菌、断发癣菌、黄癣菌、紫色癣菌、絮状表皮癣菌的MIC为0.125～1.000mg/ml,对白色念珠菌的MIC为0.0625～0.2500mg/ml。     

一种重组人α1型干扰素突变体IFN-α1/86D的纯化与鉴定

本文研究了重组人α1型干扰素突变体IFN-α1/86D在摇瓶培养和分批发酵培养的重组大肠杆菌DH5α株中的表达动态,并采用阳离子交换层析和抗α1型干扰素单克隆抗体亲和层析的两步流程对其进行了纯化,得到SDS-PAGE纯及高效液相层析(HPLC)纯的IFN-α1/86D产品,共比活性为2.3×10~7单位/毫克蛋白。N端氨基酸序列测定的结果表明,纯化产品的纯度在95％以上,但其N端不均一,产品中含有两种N端序列正确的IFN-α1/86D活性分子,即约75％为去Met分子和约25％为带Met分子。     

Differences between migrasome,a ‘new organelle’, and exosome

The migrasome is a new organelle discovered by Professor Yu Li in 2015. When cells migrate, the membranous organelles that appear at the end of the retraction fibres are migrasomes. With the migration of cells, the retraction fibres which connect migrasomes and cells finally break. The migrasomes detach from the cell and are released into the extracellular space or directly absorbed by the recipient cell. The cytoplasmic contents are first transported to the migrasome and then released from the cell through the migrasome. This release mechanism, which depends on cell migration, is named ‘migracytosis’. The main components of the migrasome are extracellular vesicles after they leave the cell, which are easy to remind people of the current hot topic of exosomes. Exosomes are extracellular vesicles wrapped by the lipid bimolecular layer. With extensive research, exosomes have solved many disease problems. This review summarizes the differences between migrasomes and exosomes in size, composition, property and function, extraction method and regulation mechanism for generation and release. At the same time, it also prospects for the current hotspot of migrasomes, hoping to provide literature support for further research on the generation and release mechanism of migrasomes and their clinical application in the future.     

小兴安岭兴安落叶松泥炭藓沼泽植物的主要微量元素

小兴安岭兴安落叶松、泥炭藓沼泽是我国典型贫营养型沼泽。沼泽中树木生长发育不良,泥炭藓和常绿小灌木发育十分良好。这与沼泽水文状况和泥炭中营养元素和微量元素有关。各种植物的主要微量元素硼、铜、钴、锰、锌等含量不同,植物的不同器官中的含量亦不同,而且随季节而变化。狭叶杜香和甸杜的主要微量元素含量特点及其季节变化规律基本相似,两种泥炭藓相似,都与兴安落叶松有明显的区别。 本文重点探讨植物体内主要微量元素及其含量变化规律,为揭示贫营养型森林沼泽生态、为合理利用与改造沼泽提供依据。