目标?鄄诱饵库搜索策略在蛋白质组质谱鉴定和质控中的应用及研究进展

基于串联质谱的蛋白质组研究会产生海量的质谱数据,这些数据通常使用数据库搜索引擎进行鉴定分析,并根据肽段谱图匹配(PSM)反推真实的样品蛋白质．对于高通量蛋白质组数据的处理,其鉴定结果的可信是后续分析应用的前提,因此对鉴定结果的质量控制尤为重要,而基于目标-诱饵库(target-decoy)搜索策略的质量控制是目前应用最为广泛的方法．本文首先介绍了基于目标-诱饵库搜索策略搜库和质量控制的实施流程,然后综述了基于目标-诱饵库搜索策略的质量控制工具,并提出了目标-诱饵库搜索策略的不足及改善方法,最后对目标-诱饵库搜索策略进行了总结与展望．     

5-氨基乙酰丙酸对苹果叶片耐弱光能力的影响

为了探讨5-氨基乙酰丙酸(ALA)对苹果耐弱光性的影响,以‘润太2号’和‘郑优3号’两个品种苹果为材料,设置露天对照(CK)、轻度遮荫(LS)和重度遮荫(SS)3种光照条件,通过根际浇灌法研究了10mg·L~(-1) ALA处理对弱光条件下苹果叶片活性氧代谢与叶绿素荧光特性的影响。结果显示:(1)与CK相比,弱光胁迫显著降低了两品种苹果叶片的超氧化物歧化酶(SOD)与过氧化物酶(POD)的活性,增大了超氧阴离子(O_2~(-·))产生速率以及过氧化氢(H2O2)和丙二醛(MDA)含量,且‘郑优3号’的活性氧产生速率及MDA含量在弱光下的升高幅度更大;ALA处理显著提高了弱光胁迫下两品种的保护酶活性,降低了活性氧产生速率和MDA含量,并以耐弱光性较差的‘郑优3号’的变化更显著。(2)在弱光胁迫下,苹果叶片的叶绿素含量和叶绿素b/a升高,而ALA处理使二者进一步显著升高。(3)弱光胁迫下,苹果叶片的叶绿素荧光参数V_J、M_o、DI_o/RC显著升高,而ψ_o、ψE_o、ψR_o、PI_(ABS)、PI_(CS)和PI_(total)显著降低;ALA处理抑制了叶绿素荧光参数在弱光胁迫下的变化,甚至使其达到优于对照的水平。研究表明,弱光条件下苹果的抗氧化能力较差,受到明显的氧化伤害,且‘郑优3号’的耐弱光能力比‘润太2号’差;ALA处理提高了苹果在弱光下的抗氧化能力,降低了弱光对苹果叶片的氧化伤害,同时还提高了弱光条件下苹果叶片捕捉、传递和转化光能的效率,改善了光合电子传递情况,增大了苹果叶片在弱光胁迫下的光能利用效率,改善了光合性能;根灌ALA可以明显提高苹果的耐弱光性。     

Influence of connection type on the biomechanical behavior of distal extension mandibular removable partial dentures supported by implants and natural teeth

Few studies are performed to evaluate the influence of connection type on the stress distribution of distal extension mandibular removable partial dentures (RPDs) supported by both implants and natural teeth. In this study, five three-dimensional finite element models were prepared to simulate mandibular bilateral partially edentulous arches. Four were RPDs supported by both implants and natural teeth, and the other one was RPDs supported only by natural teeth. The maximum equivalent (EQV) stress values of bone around implants, the abutments, and the mucosa displacements of the related supporting structures were measured. It was found that a non-rigid telescopic coping was more favorable to protect the implant than a rigid telescopic coping. Compared with other connection types, the easy resilient attachment (ERA) system seemed to be effective to associate implant without complications. However, the results obtained in the present study should be cautiously interpreted in the clinic.     

Long noncoding RNA SPRY4-IT1 regulates intestinal epithelial barrier function by modulating the expression levels of tight junction proteins

Epithelial cells line the intestinal mucosa and form an important barrier to a wide array of noxious substances in the lumen. Disruption of the barrier integrity occurs commonly in various pathologies. Long noncoding RNAs (lncRNAs) control diverse biological processes, but little is known about the role of lncRNAs in regulation of the gut permeability. Here we show that the lncRNA SPRY4-IT1 regulates the intestinal epithelial barrier function by altering expression of tight junction (TJ) proteins. SPRY4-IT1 silencing led to dysfunction of the epithelial barrier in cultured cells by decreasing the stability of mRNAs encoding TJ proteins claudin-1, claudin-3, occludin, and JAM-1 and repressing their translation. In contrast, increasing the levels of SPRY4-IT1 in the intestinal mucosa protected the gut barrier in mice exposed to septic stress by increasing the abundance of TJ proteins. SPRY4-IT1 directly interacted with TJ mRNAs, and this process was enhanced through the association with the RNA-binding protein HuR. Of interest, the intestinal mucosa from patients with increased gut permeability exhibited a decrease in the levels of SPRY4-IT1. These findings highlight a novel role for SPRY4-IT1 in controlling the intestinal epithelial barrier and define a mechanism by which SPRY4-IT1 modulates TJ expression by altering the stability and translation of TJ mRNAs.     

黄淮海地区玉蜀黍黑粉菌群体遗传结构分析

利用17个多态性ISSR引物对2017年在我国黄淮海地区采集的41株玉蜀黍黑粉菌Ustilago maydis样本进行了种群遗传结构分析。基于UPGMA法和贝叶斯模型对玉蜀黍黑粉菌群体遗传结构分析显示,采集的样本可以分为两大群,且种群的划分表现出了与来源地理纬度的一致性。因此按照各样本所属地理纬度将样本分为北纬33°-34°、北纬35°-36°、北纬37°-38° 3大种群。结果表明,分离自北纬33°-34°地区的玉蜀黍黑粉菌遗传多样性最丰富,Nei’s基因多样性（H）为0.2216,Shannon指数（I）为0.3300。分子方差分析（AMOVA）显示,变异中来自种群内部的变异为86%,种群间变异14%（φpt=0.141）。     

灵芝子实体中三萜类物质抗肿瘤活性的谱效关系

通过HPLC指纹图谱结合多元线性回归分析对不同产地灵芝子实体的功效性特征进行评价,为寻找灵芝中活性三萜提供理论依据。利用高效液相分析方法,结合样品对肿瘤细胞L1210的增殖抑制率,运用“中药色谱指纹图谱相似度评价系统2004A版”软件和多元线性回归分析11批不同品种灵芝子实体中的三萜活性成分。样品与标准指纹图谱的相似度均在0.9以上,共标定了12个共有物质峰,其中与抗L1210肿瘤细胞活性关系密切的三萜物质有灵芝酸C₂、灵芝酸G、灵芝烯酸B、灵芝烯酸A、灵芝酸K、灵芝酸A、灵芝酸F和灵芝醛A。     

Construction of an efficient genomic editing system with CRISPR/Cas9 in the vector mosquito Aedes albopictus

Aedes (Stegomyia) albopictus, also known as the Asian tiger mosquito, is a mosquito which originated in Asia. In recent years, it has become increasingly rampant throughout the world. This mosquito can transmit several arboviruses, including dengue, Zika and chikungunya viruses, and is considered a public health threat. Despite the urgent need of genome engineering to analyze specific gene functions, progress in genetical manipulation of Ae. albopictus has been slow due to a lack of efficient methods and genetic markers. In the present study, we established targeted disruptions in two genes, kynurenine hydroxylase (kh) and dopachrome conversion enzyme (yellow), to analyze the feasibility of generating visible phenotypes with genome editing by the clustered regularly interspaced short palindromic repeats (CRISPR)/ CRISPR-associated protein 9 (Cas9) system in Ae. albopictus. Following Cas9 single guide RNA ribonucleoprotein injection into the posterior end of pre-blastoderm embryos, 30%-50% of fertile survivors produced alleles that failed to complement existing kh and yellow mutations. Complete eye and body pigmentation defects were readily observed in GI pupae and adults, indicating successful generation of highly heritable mutations. We conclude that the CRISPR/Cas9-mediated gene editing system can be used mAe. albopictus and that it can be adopted as an efficient tool for genome-scale analysis and biological study.     

月季F1代群体表型性状变异分析

以月季（Rosa spp.）品种‘云蒸霞蔚’和‘太阳城’正交获得的184株F₁代群体为研究对象,采用方差分析、变异系数、遗传分析、相关性分析对花部形态性状以及叶片形态性状进行测定分析。结果表明：该杂交群体表型变异丰富,变异系数在7.33%~68.08%,其中花瓣数量在群体中的变异程度最高;杂交后代各个性状上均发生分离变异,出现不同于亲本的表现型,且离散程度较高。表型性状的遗传特点与关联分析,为挖掘控制表型性状的优良基因及辅助选择育种提供参考。