Quantifying the biologically possible range of steady-state soil and surface climates with climate model simulations

The terrestrial biosphere shapes the exchange fluxes of energy and mass at the land surface. The diversity of plant form and functioning can potentially result in a wide variety of possible climatic conditions at the land surface and in the soil, which in turn feed back to more or less suitable conditions for terrestrial productivity. Here, I use sensitivity simulations to vegetation form and functioning with a global climate model to quantify this possible range of steady-states (“PROSS”) of the surface energy-and mass balances. The surface energy-and water balances over land are associated with substantial sensitivity to vegetation parameters, with precipitation varying by more than a factor of 2, and evapotranspiration by a factor of 5. This range in biologically possible climatic conditions is associated with drastically different levels of vegetation productivity. Optimum conditions for maximum productivity are close to the simulated climate of present-day conditions. These results suggest the conclusions that (a) climate does not determine vegetation form and function, but merely constrains it, and (b) the emergent climatic conditions at the land surface seem to be close to optimal for the functioning of the terrestrial biosphere.     

Influence of different vegetation types on saturated hydraulic conductivity in alluvial topsoils

In the Parí? creek catchment (southwestern part of Slovakia), the influence of different vegetation types on selected soil properties in alluvial topsoils was studied. Specifically, the effect on saturated hydraulic conductivity considered as indicator of water transport process and the effect on soil bulk density considered as indicator of soil structure were analysed. Due to the mutual influence of plant roots on soil properties, the root biomass was also estimated and its relationship to the studied soil properties was explored. Reed and tall-sedge wetlands and alluvial wet meadows represented the studied vegetation types. Adjacent arable lands (former grasslands) with corn were included for comparison. In total, 64 samples were used for comparative analysis. A standard methodology for measurement of the saturated hydraulic conductivity, the so-called falling head technique was used on 250 cm³ soil cores. Undisturbed soil samples were taken from the depth of 5 cm. Analysis of variance, mutual comparison of mean values and correlation matrix were used for statistical analyses. Measurements showed significantly higher values of saturated hydraulic conductivity for topsoils in wetlands (6.2 m day^?1 on average) compared to mown grasslands (1.47 m day^?1) and arable land (0.79 m day^?1). The results indicated a specific significance of wetlands in relation to water transport processes in alluvial topsoils.     

A study of protein structure changes during hydration by diffuse X-ray scattering: II. Fourier transform analysis of diffuse X-ray scattering data

Radial distribution functions were deduced by Fourier transform analysis of the angular dependences of diffuse X-ray scattering intensities for the following proteins with different hydration degrees: water-soluble α-protein myoglobin, water-soluble (α + β) protein lysozyme, and transmembrane proteins from the photosynthetic reaction centers of purple bacteria Rhodobacter sphaeroides and Blastochlorii (Rhodopseudomonas) viridis. The results of Fourier transform analysis of X-ray scattering intensities give quantitative characteristics of the mechanism underlying the influence of water on the formation of biological macromolecules. On the one hand, water loosens the network of hydrogen bonds, which results in a considerable conformational mobility in the molecules of lysozyme and myoglobin and the reaction centers. On the other hand, water stabilizes and orders the protein globule. A strict correlation was found between the shift of the “first” maximum of the radial distribution function, loosening of the intraglobular hydrogen bonds, increase in the intramolecular mobility, and appearance of pronounced functional activity in macromolecules. The pattern of behavior of the first maximum in the transmembrane proteins of the reaction center was similar to that observed for the water-soluble proteins. However, the first maximum reached the limiting value of 2.9 Å at a considerably lower hydration degree compared with the water-soluble proteins. A quick transition of the protein complex of the reaction center to its native state is due to the fact that the dehydrated conformation of this complex is very close to the native conformation. Comparison of the radial distribution function for water, water-soluble proteins, and transmembrane proteins suggests a quantitative conclusion that water is the least densely packed and ordered system, the water-soluble proteins are more densely packed than water, and the transmembrane proteins are the most densely packed and ordered system.     

Lactic acid fermentation of Chinese yam (Dioscorea batatas Decne) flour and its pharmacological effect on gastrointestinal function in rat model

To develop a health-aid preparation of Chinese yam (Dioscorea batatas Decne), lactic acid fermentation was attempted using a mixed starter comprising ofLactobacillus acidophilus, Streptococcus thermophilus, andBifidobacterium bifidus. The anaerobic fermentation of a 5% Chinese yam flour suspension gave a uniform suspension of pH 4.35, containing 7.76×10⁶ CFU/mL lactic acid bacteria (LAB), and which was found to be acceptable to the panel from a sensory assessment. During the administration of the lactic acid fermented (LAF) Chinese yam to Sprague Dawley rats for 6 weeks, a smaller body weight gain, but greater excretion of feces were observed, implying the creation of a healthy gastrointestine on the administration of LAF Chinese yam, which was also confirmed by the gastrointestinal motility of the feed in rats fed on LAF Chinese yam. The constipation induced by loperamide was further suppressed in a rat group fed on a LAF Chinese yam diet, which was qualified from healthy gastrointestinal flora established by LAB. A serochemical analysis revealed a slight improvement in the blood glucose, neutral lipid and total cholesterol concentrations on administration of LAF Chinese yam, suggesting LAF Chinese yam could be served as a healthy-aid preparation, even for hyperglycemia or hyperlipidemia patients.     

An improvement of cucumber cotyledon greening bioassay for cytokinins

The cucumber cotyledon greening bioassay for cytokinins was modified by using 95% acetone-ethanol instead of 80% acetone as extraction solvent. The cotyledons were extracted directly with a 2:1 (v/v) acetone-ethanol solution in dark for 24 hours, omitting the homogenization and centrifugation operations of the previous bioassay. The modified bioassay is more convenient and especially useful in screening cytokinin-active substance from a large number of samples.     

Gene targets for fungal and mycotoxin control

It was initially shown that gallic acid, from hydrolysable tannins in the pelliele of walnut kernels, dramatically inhibits biosynthesis of aflatoxin byAspergillus flavus. The mechanism of this inhibition was found to take place upstream from the gene cluster, including the regulatory gene,aflR, involved in aflatoxin biosynthesis. Additional research using other antioxidant phenolics showed similar antiaflatoxigenic activity to gallic acid. Treatment ofA. flavus withtert-butyl hydroperoxide resulted in an almost doubling of aflatoxin biosynthesis compared to untreated samples. Thus, antioxidative response systems are potentially useful molecular targets for control ofA. flavus. A high throughput screening system was developed using yeast,Saccharomyces cerevisiae, as a model fungus. This screening provided an avenue to quickly identify fungal genes that were vulnerable to treatment by phenolic compounds. The assay also provided a means to quickly assess effects of combinations of phenolics and certain fungicides affecting mitochondrial respiration. For example, theS. cerevisiae sod2† mutant was highly sensitive to treatment by certain phenolics and strobilurins/antimycin A, fungicides which inhibit complex III of the mitochondrial respiratory chain. Verification of stress to this system in the target fungus,A. flavus, was shown through complementation analysis, wherein the mitochondrial superoxide dismutase (Mn-SOD) gene (sodA) ofA. flavus in the ortholog mutant,sod2†, ofS. cerevisiae, relieved phenolic-induced stress. Mitochondrial antioxidative stress systems play an important role in fungal response to antifungals. Combined treatment of fungi with phenolics and inhibitors of mitochondrial respiration can effectively suppress growth ofA. flavus in a synergistic fashion.     

Ischemia impairs the association between connexin 43 and M3 subtype of acetylcholine muscarinic receptor (M3-mAChR) in ventricular myocytes.

We used Western blot analysis to examine the expression of connexin 43 and M2/M3 acetylcholine muscarinic receptors (mAChR) and their interaction in ventricular myocytes from control and the ischemic heart. We confirmed that the connexin 43 and M2/ M3-mAChR were expressed in ventricular myocytes. Moreover, we showed that M3-mAChR was expressed in non-glycosylated (72 kDa) and glycosylated forms (115 kDa). Immunostaining showed that connexin 43 is closely associated with M3-mAChR in parts of cell membranes of myocytes. Immunoprecipitation of lysate of cardiac myocytes with M2/M3-mAChR antibody pulled down a 44 kDa protein recognized by connexin 43 antibody. Ischemia increased the expression of M3-mAChR in myocytes. The ischemiainduced increase in the M3-mAChR expression was specific because ischemia did not affect the expression of M1, M2, M4 and M5- mAChR in the heart. On the other hand, ischemia decreased the expression of connexin 43 in myocardium. We also examined the effect of ischemia on the interaction between M2/M3-mAChR and connexin 43. Ischemia suppressed the association of M3-mAChR with connexin 43 but did not affect the association of connexin 43 with M2-mAChR. Administration of choline before ischemia not only partially restored the expression of connexin 43 but also attenuated the ischemia-induced suppression of the association between connexin 43 and M3-mAChR. We conclude that connexin 43 interacts with M2/M3-mAChR and that ischemia specifically impairs the association between M3-mAChR and connexin 43.     

Competitive relationships in natural and artificial algal communities

Modern data on competitive relationships and their role in the succession of natural and artificial algal communities are reviewed. The mechanisms of macroalgae competition and the factors that affect the competitive outcomes are considered. The conception of competitive interactions between seaweeds in the field and culture is suggested. (1) Competitive relationships are possible only between seaweeds which live together and are able to exchange signals. (2) Success in the competition for light is the basis for wins in the competition for space. (3) The competition for nutrients never results directly in the exclusion of the competitor from the community. It inhibits the competitor and allows the winner to overgrow, shade, act allelopathically, and to displace the inferior competitor in the community. (4) People, creating an artificial monodominant community, either increase the competitive potential of cultivated species by selection of growth conditions or exclude the competitors.