Narrow H3K4me2 is required for chicken PGC formation

The development of primordial germ cells (PGCs) undergoes epigenetic modifications. The study of histone methylation in regulating PGCs is beneficial to understand the development and differentiation mechanism of germ stem cells. Notably, it provides a theoretical basis for directed induction and mass acquisition in vitro. However, little is known about the regulation of PGC formation by histone methylation. Here, we found the high enrichment of H3K4me2 in the blastoderm, genital ridges, and testis. Chromatin immunoprecipitation sequencing was performed and the results revealed that genomic H3K4me2 is dynamic in embryonic stem cells, PGCs, and spermatogonial stem cells. This trend was consistent with the H3K4me2 enrichment in the gene promoter region. Additionally, narrow region triggered PGC‐related genes (Bmp4, Wnt5a, and Tcf7l2) and signaling pathways (Wnt and transforming growth factor‐β). After knocking down histone methylase Mll2 in vitro and vivo, the level of H3K4me2 decreased, inhibiting Cvh and Blimp1 expression, then repressing the formation of PGCs. Taken together, our study revealed the whole genome map of H3K4me2 in the formation of PGCs, contributing to improve the epigenetic study in PGC formation and providing materials for bird gene editing and rescue of endangered birds.     

Long noncoding RNA HNF1A‐AS1 regulates proliferation and apoptosis of glioma through activation of the JNK signaling pathway via miR‐363‐3p/MAP2K4

Long noncoding RNAs (lncRNAs) have been proven to exert important functions in the various biological processes of human cancers. It has been reported that lncRNA HNF1 homeobox A antisense RNA 1 (HNF1A‐AS1) was abnormally expressed and played a role in the initiation and development of various human cancers. In this study, we confirmed that the expression level of HNF1A‐AS1 was increased in glioma tissues and cells. Knockdown of HNF1A‐AS1 inhibited cell proliferation and promoted cell apoptosis in glioma. Then, we disclosed the downregulation of miR‐363‐3p in glioma tissues and cell lines. The interaction between HNF1A‐AS1 and miR‐363‐3p was identified in glioma cells. Furthermore, an inverse correlation between HNF1A‐AS1 and miR‐363‐3p was observed in glioma tissues. Afterwards, we recognized that MAP2K4 was a direct target of miR‐363‐3p. The expression of MAP2K4 was negatively correlated with miR‐363‐3p while positively related to HNF1A‐AS1 in glioma tissues. We also found the regulatory effect of HNF1A‐AS1 on the MAP2K4‐dependent JNK signaling pathway. All findings indicated that HNF1A‐AS1 induces the upregulation of MAP2K4 to activate the JNK signaling pathway to promote glioma cell growth by acting as a miR‐363‐3p sponge.     

ENaC and ROMK channels in the connecting tubule regulate renal K+ secretion

We measured the activities of epithelial Na channels (ENaC) and ROMK channels in the distal nephron of the mouse kidney and assessed their role in the process of K⁺ secretion under different physiological conditions. Under basal dietary conditions (0.5% K), ENaC activity, measured as amiloride-sensitive currents, was high in cells at the distal end of the distal convoluted tubule (DCT) and proximal end of the connecting tubule (CNT), a region we call the early CNT (CNTe). In more distal parts of the CNT (aldosterone-sensitive portion [CNTas]), these currents were minimal. This functional difference correlated with alterations in the intracellular location of ENaC, which was at or near the apical membrane in CNTe and more cytoplasmic in the CNTas. ROMK activity, measured as TPNQ-sensitive currents, was substantial in both segments. A mathematical model of the rat nephron suggested that K⁺ secretion by the CNTe predicted from these currents provides much of the urinary K⁺ required for K balance on this diet. In animals fed a K-deficient diet (0.1% K), both ENaC and ROMK currents in the CNTe decreased by ∼50%, predicting a 50% decline in K⁺ secretion. Enhanced reabsorption by a separate mechanism is required to avoid excessive urinary K⁺ losses. In animals fed a diet supplemented with 3% K, ENaC currents increased modestly in the CNTe but strongly in the CNTas, while ROMK currents tripled in both segments. The enhanced secretion of K⁺ by the CNTe and the recruitment of secretion by the CNTas account for the additional transport required for K balance. Therefore, adaptation to increased K⁺ intake involves the extension of robust K⁺ secretion to more distal parts of the nephron.     

祁连山5种典型灌丛土壤生态化学计量特征

土壤C、N、P生态化学计量特征是体现生态系统变化过程的重要依据。该研究以分布于祁连山北麓中段的甘青锦鸡儿、鲜黄小檗、金露梅、鬼箭锦鸡儿、吉拉柳等5种典型灌丛群落为研究对象,通过野外调查采样,测定土壤有机C、N、P含量,分析了不同灌丛群落土壤C、N、P含量及其生态化学计量比的垂直分布特征,并探讨了各指标间的耦合关系,为祁连山地区土壤-植物养分关系及退化植被恢复与重建提供理论依据。结果表明:(1)祁连山北麓中段5种灌丛群落土壤有机C(45.29 g/kg)、全N(3.85 g/kg)、全P含量(0.70 g/kg)较高,均高于全国平均水平。(2)相关性分析表明,土壤有机C与全N之间呈极显著正相关(P0.01),但土壤有机C与全P以及全N与全P之间没有明显的相关性,且土壤C、N含量变化几乎完全同步。(3)各灌丛类型土壤有机C、全N含量均表现为表层高于下层,而全P含量土层间差异不显著;各灌丛群落土壤有机C、全N含量均随土层加深呈现"倒金字塔"的分布格局,但不同灌丛类型全P含量随土层加深的变化规律却不一致,且土层对全P含量的影响不显著。(4)5种灌丛群落土壤整体C∶N、C∶P、N∶P(11.29、66.99、5.67)均低于全国平均水平,各灌丛群落土壤C∶P、N∶P随土层加深均呈不同程度的下降趋势,但不同灌丛群落土壤C∶N随土层加深的变化规律有所不同。(5)土壤有机C、全N与C∶N、C∶P、N∶P之间均具有极显著的二次函数关系(P0.01),土壤全P与C∶N、C∶P、N∶P之间关系不显著。研究认为,祁连山北麓中段土壤C∶N和P含量的稳定性较高(CV=3.99%和2.66%),C∶P、N∶P是判断研究区限制性养分的重要指标,祁连山北麓中段灌丛群落土壤主要受N素的限制。     

基于转录组数据的密花香薷SSR位点特征分析

利用MISA软件对密花香薷转录组42 362条Unigene进行SSR位点搜索,并对其SSR序列结构及分布特征进行了分析。结果表明:(1)密花香薷转录组Unigene序列中共检测到17 564个SSR重复序列,分布于11 903条Unigene上,出现频率为28.10%,平均每3 200 bp出现一个SSR位点。(2)单、二、三核苷酸重复类型为密花香薷转录组SSR位点的主导基序类型,占总SSR位点的97.27%,3种主导基序类型中,单核苷酸所形成基元类型数量最多,共检测到169个基元类型(51.22%),单核苷酸(A/T)n基元类型占明显优势,二核苷酸重复类型(AG/CT)n基元类型占优,分别占总SSR位点的50.60%和12.17%。(3)单核苷酸SSR位点所包含重复次数最多(49),重复次数介于10～66,同一基序类型不同重复次数所形成的SSR位点数量差异较大,随重复次数的增加,SSR位点数呈下降趋势。(4)密花香薷转录组二至六核苷酸基序SSR序列长度集中在12～30 bp区间,共包含有8 190个SSR位点,占所统计SSR位点的95.60%,1 589 (≥20 bp)个SSR序列具有极高的多态性,占所统计SSR位点的18.54%。综合出现频率、分布密度、基元重复次数和长度变异等多个研究结果发现,密花香薷转录组检索到的SSR序列表现出较高的多态性潜能,具有较大的开发价值。该研究为后续密花香薷SSR分子标记引物开发奠定了理论基础。     

干旱区湿地芦苇各器官生态化学计量对土壤因子的响应

了解植物养分浓度及其化学计量对土壤因子的响应,对预测脆弱而敏感生态系统对环境变化的响应至关重要。以敦煌阳关湿地优势种芦苇(Phragmites australis)为对象,通过野外调查与实验分析,研究芦苇不同器官生态化学计量特征及其影响因素。结果表明:芦苇各器官C、P含量为叶>根>茎,N含量及N∶P为叶>茎>根,C∶N为根>茎>叶,C∶P则为茎>根>叶。叶、根C含量显著高于茎(P<0.05),叶、根C含量之间无显著差异(P>0.05),根、茎和叶N、P含量及C∶N、C∶P和N∶P差异显著(P<0.05);芦苇根N∶P<14,叶片N∶P>16,茎N∶P介于14~16;C含量在各器官之间均无显著相关性(P>0.05),根与茎、叶N含量之间呈极显著正相关(P<0.01),根与茎P含量呈极显著正相关(P<0.01),茎与叶N含量呈显著正相关(P<0.05);土壤盐分与芦苇根和茎N含量呈极显著正相关(P<0.01),土壤P含量与茎P含量呈极显著正相关(P<0.01),土壤有效P与根、茎N含量呈极显著正相关(P<0.01);土壤P是影响芦苇根、茎化学计量的主要因素,土壤盐分是影响叶片化学计量的主要因素,芦苇趋向提高各器官N含量来应对高盐、低P的土壤环境。     

推拿对慢性应激大鼠抑郁行为的影响及其机制

目的: 探讨推拿对慢性应激大鼠抑郁行为的影响及其作用机制。方法: 制备慢性轻度不可预见性的应激大鼠模型^[1-2],造模21 d后,进行推拿治疗14 d。分组:空白对照组、模型组、推拿组、氟西汀组,每组10只。每日推拿膀胱经重要穴位10 min(间隔2 min,共2次)。通过体质量检测、旷场、糖水消耗实验和水迷宫实验评价抑郁模型大鼠行为学改变情况;蛋白质免疫印迹法(Western blot)法检测大鼠海马及前额叶皮质组织中ERK/P-ERK、BDNF蛋白表达情况。结果: 模型组与空白组比较,大鼠的体质量、旷场、糖水消耗实验和水迷宫数据均显著下降(P＜0.01),P-ERK、BDNF蛋白含量均显著降低(P＜0.01);推拿组和氟西汀组与模型组比较,大鼠的体质量、旷场实验、糖水消耗实验和水迷宫实验数据均显著上升(P＜0.01),推拿组和氟西汀组大鼠海马及前额叶皮质组织中P-ERK、BDNF蛋白含量均显著升高(P＜0.05,P＜0.01),氟西汀组升高更为显著(P＜0.01)。结论: 推拿可上调大鼠海马及前额叶皮质组织中ERK蛋白的磷酸化水平,激活ERK信号通路,促进效应蛋白BDNF的表达,改善慢性应激大鼠的抑郁行为。     

龙眼组蛋白去乙酰化酶基因DlHDT1的克隆与特性分析

组蛋白去乙酰化是植物表观遗传调控的重要组成部分,对染色体结构修饰和基因表达调控发挥着重要的作用。为深入探究组蛋白去乙酰化酶基因(histone deacetylase 1,HDT1)在龙眼体胚发生过程中的功能,该研究结合龙眼基因组数据,采用RT-PCR方法克隆得到龙眼组蛋白去乙酰化酶基因(DlHDT1),对其进行生物信息学分析及亚细胞定位观察,同时结合转录组数据分析DlHDT1在体胚发生过程中的FPKM值,并利用qRT-PCR技术检测PEG6000和NaCl处理下DlHDT1的表达模式。结果表明:(1)DlHDT1基因CDS序列全长918 bp,编码305个氨基酸,该蛋白为不稳定亲水性蛋白,不含信号肽和跨膜结构,共含43个磷酸化位点,相对分子量为32 585.54 Da,等电点为4.65;进化树分析显示龙眼DlHDT1与漾濞槭亲缘关系最近(78.76%)。(2)亚细胞定位显示,DlHDT1蛋白定位于细胞核中;顺式作用元件分析发现DlHDT1基因含有大量光响应元件和脱落酸、茉莉酸甲酯等激素及逆境胁迫响应元件;转录组数据显示,DlHDT1在龙眼体胚发生不同时期均有表达,在胚性愈伤组织(EC)阶段表达最低,在球形胚(GE)阶段表达最高。(3)qRT-PCR显示,在PEG6000和NaCl处理下DlHDT1基因,呈下调表达趋势,推测DlHDT1可能参与调控龙眼对干旱及盐胁迫的响应,并存在负调控关系。研究认为,DlHDT1为核定位基因,可能参与龙眼体胚形态建成并在龙眼响应非生物逆境胁迫过程中发挥重要作用。