帽儿山不同年龄森林土壤呼吸速率的影响因子

为探明东北温带森林恢复过程中土壤呼吸(R_S)的变化趋势及其影响因子,在帽儿山选取皆伐后天然更新恢复的4个年龄(1a、10a、25a和56a)林分进行了1年的野外原位测定。结果表明:(1)皆伐后天然更新恢复1年、10年、25年和56年林分的年R_S通量差异显著(P0.05),分别为686.5、639.7、733.3、762.3g C m~(-2)a~(-1);其中生长季(5月─10月)和非生长季的R_S通量也存在显著差异,均呈现出随林龄增加先减后增的趋势。全年、生长季和非生长季R_S随林龄变化的变异系数分别为7.6%、6.3%和21.1%,表明非生长季R_S通量的变异性加大了全年R_S通量的差异。(2)4个年龄林分的Rs季节变化趋势相似,且其主控因子均随季节而变:6月─8月Rs与土壤含水率呈二次函数关系(R~2波动在56%─79%之间),其余时段则与土壤温度呈指数函数关系(R~2波动在85%─93%之间)。(3)不同年龄林分生长季R_S与0─20cm土层有机碳(SOC)密度呈正相关关系(R~2=0.434,P0.05),而非生长季R_S与同期土壤5cm温度呈正相关关系(R~2=0.959,P0.01)。本研究区森林皆伐导致R_S降低,随皆伐后森林恢复R_S不断增加,其主导驱动因子是SOC密度的增加和非生长季土壤温度的变化。     

冰核细菌在我国北方玉米上的消长动态规律

研究证明,菠萝欧文氏菌(Erwinia ananas)为我国北方玉米上优势冰核细菌种类,占总体INA细菌95 %以上。采用定量定性和定期取样分离方法,首次研究INA细菌在玉米上的消长动态规律。结果表明:玉米不同生长发育阶段是影响INA细菌在玉米上数量分布和消长动态变化的重要因素,以抽雄至成熟期间分布INA细菌数量最多,高达10 7～10 8CFU/ g,比拔节至抽雄期高出2～3个数量级,比苗期至拔节期高出4～5个数量级;同时还指出,玉米不同播期,对INA细菌数量分布影响显著,差异很大,其中INA细菌分布数量消长变化,以正常播种(1.9×10 7CFU / g) >中期播种(7.9×10 5CFU/ g) >晚期播种(5 .0×10 4 CFU/ g) ;研究指出,处于抽雄至成熟期间的玉米上分布的INA细菌数量最多,因此期间(8月上旬至9月下旬) ,气温逐渐降低,昼夜温差大,田间结露多,加上玉米处于成熟阶段,抗INA细菌能力弱,这些因素有利于低温(5～2 0℃范围内生长)型INA细菌生长繁殖,故使INA细菌分布数量最多     

GEF-H1/RhoA signalling pathway mediates lipopolysaccharide-induced intercellular adhesion molecular-1 expression in endothelial cells via activation of p38 and NF-κB

The purpose of study is to investigate the effects of GEF-H1/RhoA pathway in regulating intercellular adhesion molecule-1 (ICAM-1) expression in lipopolysaccharide (LPS)-activated endothelial cells. Exposure of human umbilical vein endothelial cells (HUVECs) to LPS induced GEF-H1 and ICAM-1 expression in dose- and time-dependent up-regulating manners. Pretreatment with Clostridium difficile toxin B-10463 (TcdB-10463), an inhibitor of Rho activity, reduced LPS-related phosphorylation of p65 at Ser 536 in a dose-dependent manner. Inhibition of TLR4 expression significantly blocked LPS-induced RhoA activity, NF-κB transactivation, GEF-H1 and ICAM-1 expression. Coimmunoprecipitation assay indicated that LPS-activated TLR4 and GEF-H1 formed a signalling complex, suggesting that LPS, acting through TLR4, stimulates GEF-H1 expression and RhoA activity, and thereby induces NF-κB transactivation and ICAM-1 gene expression. However, GEF-H1/RhoA regulates LPS-induced NF-κB transactivation and ICAM-1 expression in a MyD88-independent pathway because inhibition of MyD88 expression could not block LPS-induced RhoA activity. Furthermore, pretreatment with Y-27632, an inhibitor of ROCK, significantly reduced LPS-induced p38, ERK1/2 and p65 phosphorylation, indicating that ROCK acts as an upstream effector of p38 and ERK1/2 to promote LPS-induced NF-κB transactivation and ICAM-1 expression. What is more, the p38 inhibitor (SB203580) but not ERK1/2 inhibitor (PD98059) blocked LPS-induce NF-κB transactivation and ICAM-1 expression, which demonstrates that RhoA mediates LPS-induced NF-κB transactivation and ICAM-1 expression dominantly through p38 but not ERK1/2 activation. In summary, our data suggest that LPS-induced ICAM-1 synthesis in HUVECs is regulated by GEF-H1/RhoA-dependent signaling pathway via activation of p38 and NF-κB.     

老芒麦遗传多样性及育种研究进展

老芒麦（Elymus sibiricus）的研究对我国北方草原及青藏高原高寒草甸的退化草地改良、发展草地畜牧业具有重要意义。本文综述了老芒麦在形态学、细胞学、蛋白质和DNA分子水平上的遗传多样性研究概况,并总结了国内老芒麦的育种研究进展。目前国内外专门针对不同老芒麦种质材料（accession）或居群（populations）遗传多样性的研究鲜见报道,相关研究主要集中在与披碱草属（Elymus）及其近缘小麦族物种的系统进化研究方面;其次,我国仅有6个老芒麦国家审定品种,且育种手段较单一、落后,育成品种优势集中在产量和适应性上,缺乏对抗逆性种质的筛选培育。     

大鼠眼球和泪腺中睫状神经营养因子及其受体的组织定位

目的观察睫状神经营养因子(CNTF)及其受体CNTFRα在大鼠眼球、泪腺上的分布情况.方法取雄性SD大鼠两侧眼球和泪腺,作石蜡切片,用免疫组织化学ABC法染色检测眼球、泪腺中CNTF和CNTFRα的免疫阳性反应.结果 CNTF和CNTFRα的免疫阳性反应产物在眼球和泪腺的组织定位基本相同,包括角膜上皮细胞、固有层神经纤维、角膜细胞、内皮细胞,虹膜上皮细胞,睫状体上皮细胞,晶状体上皮,视网膜色素上皮细胞、苗勒细胞、节细胞层细胞,球结膜上皮细胞,泪腺腺细胞及导管上皮.结论 CNTF及其受体选择性地分布于眼球和泪腺的一些细胞中,且多数细胞与房水和泪液的产生和接触有关.     

Screening of rice cultivars for Cr-stress response by using the parameters of seed germination,morpho-physiological and antioxidant analysis

Rice is the most important crop for the majority of population across the world with sensitive behavior toward heavy metals such as chromium (Cr) in polluted regions. Although, there is no information on the Cr resistance phenotyping in rice. Herein, two different groups of rice cultivars (normal, and hybrid) were used, each group with 14 different rice cultivars. Firstly, seed germination analysis was conducted by evaluating various seed germination indices to identify the rice cultivars with greatest seed germination vigor. Furthermore, exposure of chromium (Cr) toxicity to 28 different rice varieties (NV1-NV14, HV1-HV14) caused noticeable plant biomass reduction. Subsequently, NV2, NV6, NV10, NV12, NV13 (normal type), HV1, HV4, HV8, and HV9 (hybrid types) were pragmatic as moderately sensitive varieties, while NV3, NV4, NV9, and NV14 (normal type), HV3, HV6, HV7, and HV13 were observed as moderately tolerant. Although, NV7, and HV10 were ranked most sensitive cultivars, and NV11, and HV14 were considered as most tolerant varieties as compared to the other rice (both groups) genotypes. Afterward, Cr induced reduction in chlorophyll pigments were significantly lesser in HV14 relative to NV11, NV7, and especially HV10, and as a result HV14 modulated the total soluble sugar level as well as reduced ROS accumulation, and MDA contents production by stimulating the antioxidant defense mechanism conspicuously which further reduced the electrolyte leakage as well. Our outcomes provide support to explore the Cr tolerance mechanism in cereal crops as well as knowledge about rice breeding with increased tolerance against Cr stress.     

结合三代测序与二代测序技术揭示蜜蜂球囊菌孢子转录组的复杂性

【目的】蜜蜂球囊菌(Ascosphaera apis)是一种专性侵染蜜蜂幼虫的致死性真菌病原。本研究旨在利用PacBio单分子实时(singlemoleculereal-time,SMRT)测序技术对蜜蜂球囊菌孢子(AaS)中基因的可变剪切(alternative splicing,AS)和可变多聚腺苷酸化(alternative polyadenylation,APA)以及长链非编码RNA (long non-coding RNA,lncRNA)进行鉴定和分析,进而揭示蜜蜂球囊菌孢子中转录组的复杂性。【方法】采用Suppa软件对蜜蜂球囊菌孢子中基因的AS事件进行鉴定。通过RT-PCR对不同类型的AS事件进行验证。采用TAPIS pipeline对蜜蜂球囊菌孢子基因的APA位点进行鉴定。利用MEME软件分析孢子全长转录本的poly(A)剪接位点上游50bp的序列特征并鉴定motif。联用CPC和CNCI软件和比对Swiss-prot数据库的方法预测lncRNA,取三者的交集作为高可信度的lncRNA集合。进一步比较lncRNA和mRNA的转录本长度,外显子数量与长度,内含子长度,GC含...     

基于目标检测的东北虎个体自动识别

东北虎个体的自动识别是种群数量评估和制定有效保护策略的重要基础。以东北虎林园和怪坡虎园38 只虎为研究对象,将目标检测方法首次应用到东北虎个体识别研究中,采用多种深度卷积神经网络模型,以实现虎个体的自动识别。首先通过相机在不同角度对 38 只东北虎进行拍摄取样,建立包含13579张图像的虎样本数据集。由于虎的体侧条纹信息不具有对称性,所以运用单次多盒目标检测（Single Shot MultiBox Detector, SSD）方法,对虎的躯干左侧条纹、右侧条纹以及脸部等不同部位图像,进行自动检测并分割提取,极大节省手工截取时间。在检测分割出的左右侧及脸部不同部位图片基础上,运用上、下、左、右平移变换进行数据增强,使图片数目扩大为原来的5 倍。采用LeNet、AlexNet、ZFNet、VGG16、ResNet34共5 种卷积神经网络模型进行个体自动识别。为了提高识别准确率,运用平均值和最大值不同组合方式来优化池化操作,并在全连接层引入概率分别为0.1、0.2、0.3、0.4的丢弃（Dropout）操作防止过拟合。实验表明,目标检测模型耗时较少,截取分割老虎不同部位条纹能达到0.6 s/张,远快于人工截取速度,并且在测试集上准确率能达到97.4%。不同姿态下的目标部位都能正确识别并分割。ResNet34模型的准确率优于其他网络模型,左右侧条纹以及脸部图像识别准确率分别为93.75%、97.01%和 86.28%,右侧条纹识别准确率优于左侧条纹和脸部图像。研究为野生虎自动相机影像的识别提供技术参考。在未来研究中,对东北虎个体影响数据进行扩充,选取更多影像数据进行训练,使网络具有更强的适应性,从而实现更准确的个体识别。     

大叶杨干旱和水淹胁迫的转录组分析

大叶杨（Populus lasiocarpa）是中国特有的杨属物种,干旱和水淹是影响大叶杨生长和分布范围的两个关键因子。AP2/ERF转录因子家族在植物响应非生物胁迫中发挥重要作用。本研究采用转录组测序、生物信息学分析手段并结合分子实验验证初步鉴定了参与大叶杨干旱和水淹胁迫响应的关键基因。研究结果显示：（1）在大叶杨中分别鉴定到3,986/385个响应干旱/水淹胁迫的差异表达基因,其中包括237个同时响应干旱和水淹胁迫的差异表达基因。（2）在大叶杨中共鉴定到205个AP2/ERF家族成员,系统发育分析表明其在大叶杨中主要分为5个亚家族,并显著富集于差异表达基因中。（3）筛选部分胁迫前后差异表达的PlAP2/ERF基因进行qRT-PCR实验,经证实这些基因在大叶杨受到干旱/水淹胁迫时均可被诱导表达。综上,大叶杨在水淹胁迫下的差异表达基因数量明显少于干旱胁迫,AP2/ERF基因家族的部分基因参与到大叶杨干旱/水淹胁迫的应激表达过程。