RANBP2 and USP9x regulate nuclear import of adenovirus minor coat protein IIIa

As intracellular parasites, viruses exploit cellular proteins at every stage of infection. Adenovirus outbreaks are associated with severe acute respiratory illnesses and conjunctivitis, with no specific antiviral therapy available. An adenoviral vaccine based on human adenovirus species D (HAdV-D) is currently in use for COVID-19. Herein, we investigate host interactions of HAdV-D type 37 (HAdV-D37) protein IIIa (pIIIa), identified by affinity purification and mass spectrometry (AP-MS) screens. We demonstrate that viral pIIIa interacts with ubiquitin-specific protease 9x (USP9x) and Ran-binding protein 2 (RANBP2). USP9x binding did not invoke its signature deubiquitination function but rather deregulated pIIIa-RANBP2 interactions. In USP9x-knockout cells, viral genome replication and viral protein expression increased compared to wild type cells, supporting a host-favored mechanism for USP9x. Conversely, RANBP2-knock down reduced pIIIa transport to the nucleus, viral genome replication, and viral protein expression. Also, RANBP2-siRNA pretreated cells appeared to contain fewer mature viral particles. Transmission electron microscopy of USP9x-siRNA pretreated, virus-infected cells revealed larger than typical paracrystalline viral arrays. RANBP2-siRNA pretreatment led to the accumulation of defective assembly products at an early maturation stage. CRM1 nuclear export blockade by leptomycin B led to the retention of pIIIa within cell nuclei and hindered pIIIa-RANBP2 interactions. In-vitro binding analyses indicated that USP9x and RANBP2 bind to C-terminus of pIIIa amino acids 386–563 and 386–510, respectively. Surface plasmon resonance testing showed direct pIIIa interaction with recombinant USP9x and RANBP2 proteins, without competition. Using an alternative and genetically disparate adenovirus type (HAdV-C5), we show that the demonstrated pIIIa interaction is also important for a severe respiratory pathogen. Together, our results suggest that pIIIa hijacks RANBP2 for nuclear import and subsequent virion assembly. USP9x counteracts this interaction and negatively regulates virion synthesis. This analysis extends the scope of known adenovirus-host interactions and has potential implications in designing new antiviral therapeutics.     

工业酵母抗逆机理研究进展

工业酵母利用木质纤维素等生物质资源发酵生产醇、酮、醛、酸等各种化合物,是解决人类面临的不可再生资源和能源危机的重要途径,这激发了人们对木质纤维素水解液为原料和环保节能型浓醪发酵技术的极度关注。然而高浓度底物、产物、渗透压、木质纤维素水解液中抑制性物质、发酵过程温度的提高均会抑制微生物生长代谢及发酵性能,这是发酵行业"瓶颈"问题。本文简述了渗透压、温度及抑制性物质对酵母细胞生长的危害,并从胞内稳态平衡、分子水平等方面着重叙述工业酵母对渗透压、温度及抑制性物质的抗逆机制研究进展。     

落羽杉根系有机酸与NSC代谢对三峡消落带水位变化的响应

为探究三峡库区消落带水位变化下落羽杉根系有机酸和非结构性碳水化合物(NSC)的响应特征,以适生木本植物落羽杉为对象,在消落带原位环境中设置对照-SS(海拔175 m,试验期间无水淹)、MS(海拔170 m,中度水淹胁迫)和DS(海拔165 m,深度水淹胁迫)3个处理,分别于海拔170 m和165 m退水时采集样品,测定并分析根系有机酸和NSC的变化。结果表明:(1)库区水淹对落羽杉基径无显著影响,仅有DS组明显抑制了高生长,落羽杉生长能较积极地响应库区水淹。(2)库区水淹对落羽杉侧根和总根有机酸的影响一致,侧根有机酸代谢作用优于主根。与SS组相比,MS组根系有机酸含量增高,DS组根系有机酸含量降低,除部分根系酒石酸、苹果酸、柠檬酸变化达到显著水平外,其余有机酸均无显著变化。(3)库区不同强度水淹对落羽杉根系NSC有不同程度的影响。与SS组相比,MS组可溶性糖无显著变化,淀粉、NSC含量显著增加,但总根NSC在水淹前与水淹后无明显差异;形成鲜明对比的是,DS组显著降低了可溶性糖、NSC含量,对淀粉无显著影响,且水淹后总根NSC显著低于水淹前。(4)相关分析表明,主根、总根草酸、苹果酸、柠檬酸及侧根、总根莽草酸分别与淀粉、NSC间表现出显著相关性(P0.05)。研究结果表明,在三峡库区消落带水淹胁迫下,落羽杉根系有机酸与NSC代谢联系紧密。通过维持一定的根系淀粉含量,保持植株正常的有机酸代谢水平,较好地适应三峡库区消落带生境。     

农田小麦在土壤湿润条件下的气孔活动

1984年在北京大屯农业生态系统试验站用MK 3型自动气孔计对土壤湿润、睛朗天气条件下冬小麦气孔传导力的日变化,季节变化、以及叶龄和梯度变化进行了观测。发现叶片传导力(gl)的日变化为双峰曲线,正午gl的降低可能是强光和高的饱和差作用的结果,从而限制了光合潜力的发挥。近轴面传导力(gd)和远轴面传导力(gb)的比(α)不是一个常数,这是因为两面气孔对环境条件的反应不同。gl和冠层传导力(g(?))都以孕穗期为最高。灌浆时期gl和gc有所降低,反映了叶片的过早衰老。这是影响本地区小麦产量的重要因素之一,其原因不仅与土壤水分有关,还与大气条件和病虫害有关。本文还讨论了gl随时龄的变化。观测表明,气孔计可以迅速准确地掌握作物群体的生理动态,有可能用于指导农田灌灌和管理。     

呼肠病毒BYD株吸附蛋白σ1的原核表达及其抗原性鉴定

将呼肠病毒BYD株S1片段编码的细胞吸附蛋白基因连接至pET-28a( ),构建表达载体pET-28a( )-S1,转化表达宿主菌E.coli BL21(DE3),分析表达载体能否表达预期大小的重组σ1,并进一步鉴定重组σ1的抗原性。SDS-PAGE实验表明,经IPTG诱导后,表达载体能表达53kD左右蛋白质,与重组σ1的预期大小相符;免疫印迹分析表明重组σ1有较好的抗原性和特异性,可用于呼肠病毒诊断试剂的制备。     

A bacterial effector counteracts host autophagy by promoting degradation of an autophagy component

Beyond its role in cellular homeostasis, autophagy plays anti‐ and promicrobial roles in host–microbe interactions, both in animals and plants. One prominent role of antimicrobial autophagy is to degrade intracellular pathogens or microbial molecules, in a process termed xenophagy. Consequently, microbes evolved mechanisms to hijack or modulate autophagy to escape elimination. Although well‐described in animals, the extent to which xenophagy contributes to plant–bacteria interactions remains unknown. Here, we provide evidence that Xanthomonas campestris pv. vesicatoria (Xcv) suppresses host autophagy by utilizing type‐III effector XopL. XopL interacts with and degrades the autophagy component SH3P2 via its E3 ligase activity to promote infection. Intriguingly, XopL is targeted for degradation by defense‐related selective autophagy mediated by NBR1/Joka2, revealing a complex antagonistic interplay between XopL and the host autophagy machinery. Our results implicate plant antimicrobial autophagy in the depletion of a bacterial virulence factor and unravel an unprecedented pathogen strategy to counteract defense‐related autophagy in plant–bacteria interactions.     

Alterations and Mechanism of Gut Microbiota in Graves’ Disease and Hashimoto’s Thyroiditis

To explore the role of gut microbiota in Graves’ disease (GD) and Hashimoto’s thyroiditis (HT). Seventy fecal samples were collected, including 27 patients with GD, 27 with HT, and 16 samples from healthy volunteers. Chemiluminescence was used to detect thyroid function and autoantibodies (FT3, FT4, TSH, TRAb, TGAb, and TPOAb); thyroid ultrasound and 16S sequencing were used to analyze the bacteria in fecal samples; KEGG (Kyoto Encyclopedia of Genes and Genomes) and COG (Clusters of Orthologous Groups) were used to analyze the functional prediction and pathogenesis. The overall structure of gut microbiota in the GD and HT groups was significantly different from the healthy control group. Proteobacteria and Actinobacteria contents were the highest in the HT group. Compared to the control group, the GD and HT groups had a higher abundance of Erysipelotrichia, Cyanobacteria, and Ruminococcus_2 and lower levels of Bacillaceae and Megamonas. Further analysis of KEGG found that the “ABC transporter” metabolic pathway was highly correlated with the occurrence of GD and HT. COG analysis showed that the GD and HT groups were enriched in carbohydrate transport and metabolism compared to the healthy control group but not in amino acid transport and metabolism. Our data suggested that Bacillus, Blautia, and Ornithinimicrobium could be used as potential markers to distinguish GD and HT from the healthy population and that “ABC transporter” metabolic pathway may be involved in the pathogenesis of GD and HT.     

响应面模型分析高温蛋白酶菌株增殖和产酶关系

【目的】【方法】采用Box-Behnken法设计三因素三水平响应面实验,对比分析了高温蛋白酶高产菌株枯草芽孢杆菌BY25发酵过程中细菌生长与产酶之间的关系。【结果】实验表明,细菌生长与产酶的关系在各因素交互影响下变化显著。在中低水平的有机氮源添加条件下,细菌的大量繁殖显著抑制了蛋白酶产量,而在高水平的有机氮源添加条件下,细菌量的增长对产酶的作用由抑制转为促进。【结论】该结果表明,产酶诱导物有机氮源豆制品废渣的添加很可能显著提高了枯草芽孢杆菌群体中产酶菌的比率,而在没有合适诱导物的情况下通过增加细菌量并不能有效提高蛋白酶产量。     

西藏东南部色季拉山主要类型森林叶片和枯落物养分含量特征

为阐明不同生长年限森林叶片和不同分解程度枯落物养分含量特征,为植物-土壤养分循环研究提供科学依据。以藏东南色季拉山几种典型森林植被(雪山杜鹃(Rhododendron aganniphum)、海拔4000 m和3900 m区域急尖长苞冷杉(Abies georgei var. smithii)、川滇高山栎(Quercus aquifolioides))为研究对象,分析了1年生和2年生植物叶片及不同分解程度枯落物有机碳(OC)、全氮(TN)、全磷(TP)和全钾(TK)含量。结果表明:色季拉山森林叶片和枯落物OC含量表现为2年生叶片1年生叶片未分解枯落物(ND)半分解枯落物(SD)完全分解枯落物(CD),即老叶片以C积累为主,而枯落物OC含量随分解程度的增加而下降,叶片OC平均含量(68.5%)显著高于中国平均水平(45.5%);叶片N、P、K含量表现为1年生2年生,即新叶以N、P、K等营养物质的吸收积累为主。枯落物TN含量低于中国森林的平均水平(12.03 g/kg),而TP含量显著高于中国森林平均水平(0.74 g/kg),枯落物TN和TP以SD最高,即分解初期表现为净固定,而后期则呈净释放,TK含量随分解程度的增加而增加,表现为K的净固定;叶片C∶N,C∶P和C∶K表现为2年生1年生,枯落物C∶N,C∶P和C∶K随着分解程度的增加而显著降低;叶片N∶P处于较低水平(6.08),显著低于全球平均水平(16.0),表现出明显的N限制营养型;研究结果为科学阐明藏东南森林生态系统植被-土壤养分循环研究提供了数据支撑。