Biological specimen preparation for transmission electron microscopy

Biological Specimen Preparation for Transmission Electron Microscopy (1998). A.M. Glauert, P.R. Lewis. In: A.M. Glauert (Ed). Practical Methods in Electron Microscopy, Vol 17. London: Portland Press, 326 pp. £39.50 paperback; ISBN 1 85578 060 7     

Over the top: do thermal barriers along elevation gradients limit biotic similarity?

Organismal dispersal through mountain passes should be more constrained by temperature‐related differences between lowland and highland sites in montane environments. This may lead to higher rates of diversification through isolation of existing lineages toward the tropics. This mechanism, proposed by Janzen, could influence broad‐scale patterns of biodiversity across mountainous regions and more broadly across latitudinal gradients. We constructed two complementary analyses to test this hypothesis. First, we measured topographically‐derived thermal gradients using recently‐developed climatic data across the Americas, reviewing the main expectations from Janzen's climatic model. Then, we evaluated whether thermal barriers predict assemblage similarity for amphibians and mammals along elevational gradients across most of their latitudinal extent in the Americas. Thermal barriers between low and high elevation areas, initially proposed to be unique to tropical environments, are comparably strong in some temperate regions, particularly along the western slopes of North American dividing ranges. Biotic similarity for both mammals and amphibians decreases between sites that are separated by elevation‐related thermal barriers. That is, the stronger the thermal barrier separating pairs of sites across the latitudinal gradient, the lower the similarity of their species assemblages. Thermal barriers explain 10–35% of the variation in latitudinal gradients of biotic similarity, effects that were stronger in comparisons of sites at high elevations. Mammals' stronger dispersal capacities and homeothermy may explain weaker effects of thermal barriers on gradients of assemblage similarity than among amphibians. Understanding how temperature gradients have shaped gradients of montane biological diversity in the past will improve understanding of how changing environments may affect them in the future.     

Intrinsic factors drive spatial genetic variation in a highly vagile species,the wedge‐tailed eagle Aquila audax,in Tasmania

Knowledge of dispersal in a species, both its quantity and the factors influencing it, are crucial for our understanding of ecology and evolution, and for species conservation. Here we quantified and formally assessed the potential contribution of extrinsic factors on individual dispersal in the threatened Tasmanian population of wedge‐tailed eagle Aquila audax. As successful breeding by these individuals appears strongly related to habitat, we tested the effect of landscape around sampling sites on genetic diversity and spatial genetic variation, as these are influenced by patterns of dispersal. Similarly, we also tested whether habitat intervening sampling sites could explain spatial genetic variation. Twenty microsatellites were scored, but only a small proportion of spatial genetic variation (4.6%) could be explained by extrinsic factors, namely habitat suitability and elevation between sites. However, significant clinal genetic variation was evident across Tasmania, which we explain by intrinsic factors, likely high natal philopatry and occasional long‐distance dispersal. This study demonstrates that spatial genetic variation can be detected in highly vagile species at spatial scales that are small relative to putative dispersal ability, although here there was no substantial relationship with landscape factors tested.     

Bacterial Virulence Factors: Secreted for Survival

Virulence is described as an ability of an organism to infect the host and cause a disease. Virulence factors are the molecules that assist the bacterium colonize the host at the cellular level. These factors are either secretory, membrane associated or cytosolic in nature. The cytosolic factors facilitate the bacterium to undergo quick adaptive—metabolic, physiological and morphological shifts. The membrane associated virulence factors aid the bacterium in adhesion and evasion of the host cell. The secretory factors are important components of bacterial armoury which help the bacterium wade through the innate and adaptive immune response mounted within the host. In extracellular pathogens, the secretory virulence factors act synergistically to kill the host cells. In this review, we revisit the role of some of the secreted virulence factors of two human pathogens: Mycobacterium tuberculosis—an intracellular pathogen and Bacillus anthracis—an extracellular pathogen. The advances in research on the role of secretory factors of these pathogens during infection are discussed.     

Atomic Layer Deposition of Functional Layers for on Chip 3D Li‐Ion All Solid State Microbattery

Nowadays, millimeter scale power sources are key devices for providing autonomy to smart, connected, and miniaturized sensors. However, until now, planar solid state microbatteries do not yet exhibit a sufficient surface energy density. In that context, architectured 3D microbatteries appear therefore to be a good solution to improve the material mass loading while keeping small the footprint area. Beside the design itself of the 3D microbaterry, one important technological barrier to address is the conformal deposition of thin films (lithiated or not) on 3D structures. For that purpose, atomic layer deposition (ALD) technology is a powerful technique that enables conformal coatings of thin film on complex substrate. An original, robust, and highly efficient 3D scaffold is proposed to significantly improve the geometrical surface of miniaturized 3D microbattery. Four functional layers composing the 3D lithium ion microbattery stacking has been successfully deposited on simple and double microtubes 3D templates. In depth synchrotron X‐ray nanotomography and high angle annular dark field transmission electron microscope analyses are used to study the interface between each layer. For the first time, using ALD, anatase TiO₂ negative electrode is coated on 3D tubes with Li₃PO₄ lithium phosphate as electrolyte, opening the way to all solid‐state 3D microbatteries. The surface capacity is significantly increased by the proposed topology (high area enlargement factor – “thick” 3D layer), from 3.5 μA h cm^?2 for a planar layer up to 0.37 mA h cm^?2 for a 3D thin film (105 times higher).