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961.
David Sánchez-Fernández Andrés Millán Pedro Abellán Félix Picazo José A. Carbonell Ignacio Ribera 《ZooKeys》2015,(520):147-154
The ESACIB (‘EScarabajos ACuáticos IBéricos’) database is provided, including all available distributional data of Iberian and Balearic water beetles from the literature up to 2013, as well as from museum and private collections, PhD theses, and other unpublished sources. The database contains 62,015 records with associated geographic data (10×10 km UTM squares) for 488 species and subspecies of water beetles, 120 of them endemic to the Iberian Peninsula and eight to the Balearic Islands. This database was used for the elaboration of the “Atlas de los Coleópteros Acuáticos de España Peninsular”. In this dataset data of 15 additional species has been added: 11 that occur in the Balearic Islands or mainland Portugal but not in peninsular Spain and an other four with mainly terrestrial habits within the genus Helophorus (for taxonomic coherence). The complete dataset is provided in Darwin Core Archive format. 相似文献
962.
Aymer Andrés Vásquez-Ordó?ez Nicolas A. Hazzi David Escobar-Prieto Dario Paz-Jojoa Soroush Parsa 《ZooKeys》2015,(545):75-87
Whiteflies (Hemiptera, Aleyrodidae) are represented by more than 1,500 herbivorous species around the world. Some of them are notorious pests of cassava (Manihot
esculenta), a primary food crop in the tropics. Particularly destructive is a complex of Neotropical cassava whiteflies whose distribution remains restricted to their native range. Despite their importance, neither their distribution, nor that of their associated parasitoids, is well documented. This paper therefore reports observational and specimen-based occurrence records of Neotropical cassava whiteflies and their associated parasitoids and hyperparasitoids. The dataset consists of 1,311 distribution records documented by the International Center for Tropical Agriculture (CIAT) between 1975 and 2012. The specimens are held at CIAT’s Arthropod Reference Collection (CIATARC, Cali, Colombia). Eleven species of whiteflies, 14 species of parasitoids and one species of hyperparasitoids are reported. Approximately 66% of the whitefly records belong to Aleurotrachelus
socialis and 16% to Bemisia
tuberculata. The parasitoids with most records are Encarsia
hispida, Amitus
macgowni and Encarsia
bellottii for Aleurotrachelus
socialis; and Encarsia
sophia for Bemisia
tuberculata. The complete dataset is available in Darwin Core Archive format via the Global Biodiversity Information Facility (GBIF). 相似文献
963.
James J. Gilroy Graham W. Prescott Johann S. Cardenas Pamela González del Pliego Castañeda Andrés Sánchez Luis E. Rojas‐Murcia Claudia A. Medina Uribe Torbjørn Haugaasen David P. Edwards 《Global Change Biology》2015,21(4):1531-1540
Oil palm agriculture is rapidly expanding in the Neotropics, at the expense of a range of natural and seminatural habitats. A key question is how this expansion should be managed to reduce negative impacts on biodiversity. Focusing on the Llanos of Colombia, a mixed grassland–forest system identified as a priority zone for future oil palm development, we survey communities of ants, dung beetles, birds and herpetofauna occurring in oil palm plantations and the other principal form of agriculture in the region – improved cattle pasture – together with those of surrounding natural forests. We show that oil palm plantations have similar or higher species richness across all four taxonomic groups than improved pasture. For dung beetles, species richness in oil palm was equal to that of forest, whereas the other three taxa had highest species richness in forests. Hierarchical modelling of species occupancy probabilities indicated that oil palm plantations supported a higher proportion of species characteristic of forests than did cattle pastures. Across the bird community, occupancy probabilities within oil palm were positively influenced by increasing forest cover in a surrounding 250 m radius, whereas surrounding forest cover did not strongly influence the occurrence of other taxonomic groups in oil palm. Overall, our results suggest that the conversion of existing improved pastures to oil palm has limited negative impacts on biodiversity. As such, existing cattle pastures of the Colombian Llanos could offer a key opportunity to meet governmental targets for oil palm development without incurring significant biodiversity costs. Our results also highlight the value of preserving remnant forests within these agricultural landscapes, protecting high biodiversity and exporting avian ‘spill‐over’ effects into oil palm plantations. 相似文献
964.
Sinara Santos Jardim André Passaglia Schuch Camila Moura Pereira Elgion Lucio Silva Loreto 《Cell stress & chaperones》2015,20(5):843-851
There are many complex interactions between transposable elements (TEs) and host genomes. Environmental changes that induce stressful conditions help to contribute for increasing complexity of these interactions. The transposon mariner-Mos1 increases its mobilization under mild heat stress. It has putative heat shock elements (HSEs), which are probably activated by heat shock factors (HSFs). Ultraviolet radiation (UVC) is a stressor that has been suggested as able to activate heat shock protein genes (Hsp). In this study, we test the hypothesis that if UVC induces Hsp expression, as heat does, it could also promote mariner-Mos1 transposition and mobilization. The Drosophila simulans white-peach is a mutant lineage that indicates the mariner-Mos1 transposition phenotypically through the formation of mosaic eyes. This lineage was exposed to UVC or mild heat stress (28 °C) in order to evaluate the induction of mariner-Mos1 expression by RT-qPCR, as well as the mariner-Mos1 mobilization activity based on the count number of red spots in the eyes. The effects of both treatments on the developmental time of flies and cell cycle progression were also investigated. Both the analysis of eyes and mariner-Mos1 gene expression indicate that UVC radiation has no effect in mariner-Mos1 transposition, although heat increases the expression and mobilization of this TE soon after the treatment. However, the expression of Hsp70 gene increased after 24 h of UVC exposure, suggesting different pathway of activation. These results showed that heat promotes mariner-Mos1 mobilization, although UVC does not induce the expression or mobilization of this TE.
Electronic supplementary material
The online version of this article (doi:10.1007/s12192-015-0611-2) contains supplementary material, which is available to authorized users. 相似文献965.
966.
Direct versus indirect facilitation (herbivore mediated) among woody plants in a semiarid Chaco forest: A spatial association approach
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Andrés Tálamo Alicia Barchuk Silvana Cardozo Carlos Trucco Gustavo MarÁs Carolina Trigo 《Austral ecology》2015,40(5):573-580
In arid environments, direct facilitation (microhabitat amelioration) and indirect facilitation (‘associational resistance’ via protection from herbivory) among plants of different species may act simultaneously. Little is known about their relative effects. One way to disentangle the effects is by evaluating spatial associations. We examined the relative importance of these two mechanisms of facilitation in the semiarid Chaco vegetation of north‐central Argentina, through an eight‐way observational study in which we quantified the degree of spatial association between saplings of each of two key tree species, Schinopsis lorentzii (Anacardiaceae) and Aspidosperma quebracho‐blanco (Apocynaceae), with shrub neighbours either possessing spines or without spines and in both an ungrazed site and a site with a long history of cattle grazing. We analysed data across 400 subparcels at each site with spatial analysis by distance indices. Saplings of both tree species showed positive spatial associations with spiny shrubs in the grazed site but not in the ungrazed site, and never with non‐spiny shrubs. This result suggests that spiny shrubs may indeed provide associational resistance for saplings of key tree species in grazed habitats in these dry subtropical forests, that is, that indirect facilitation may predominate over direct facilitation. If confirmed by experimental studies, this result can have implications for the silvopastoral management of rapidly expanding ranches in the semiarid Chaco, where current practice includes the near elimination of native shrubs. 相似文献
967.
André E. Minoche Juliane C. Dohm Jessica Schneider Daniela Holtgr?we Prisca Vieh?ver Magda Montfort Thomas Rosleff S?rensen Bernd Weisshaar Heinz Himmelbauer 《Genome biology》2015,16(1)
We develop a method to predict and validate gene models using PacBio single-molecule, real-time (SMRT) cDNA reads. Ninety-eight percent of full-insert SMRT reads span complete open reading frames. Gene model validation using SMRT reads is developed as automated process. Optimized training and prediction settings and mRNA-seq noise reduction of assisting Illumina reads results in increased gene prediction sensitivity and precision. Additionally, we present an improved gene set for sugar beet (Beta vulgaris) and the first genome-wide gene set for spinach (Spinacia oleracea). The workflow and guidelines are a valuable resource to obtain comprehensive gene sets for newly sequenced genomes of non-model eukaryotes.
Electronic supplementary material
The online version of this article (doi:10.1186/s13059-015-0729-7) contains supplementary material, which is available to authorized users. 相似文献968.
969.
970.
Anthony T Papenfuss Zhi-Ping Feng Katina Krasnec Janine E Deakin Michelle L Baker Robert D Miller 《BMC genomics》2015,16(1)