CT Attenuation Values of Blood and Myocardium: Rationale for Accurate Coronary Artery Calcifications Detection with Multi-Detector CT

Objectives

To determine inter-session and intra/inter-individual variations of the attenuations of aortic blood/myocardium with MDCT in the context of calcium scoring. To evaluate whether these variations are dependent on patients’ characteristics.

Methods

Fifty-four volunteers were evaluated with calcium scoring non-enhanced CT. We measured attenuations (inter-individual variation) and standard deviations (SD, intra-individual variation) of the blood in the ascending aorta and of the myocardium of left ventricle. Every volunteer was examined twice to study the inter-session variation. The fat pad thickness at the sternum and noise (SD of air) were measured too. These values were correlated with the measured aortic/ventricular attenuations and their SDs (Pearson). Historically fixed thresholds (90 and 130 HU) were tested against different models based on attenuations of blood/ventricle.

Results

The mean attenuation was 46HU (range, 17-84HU) with mean SD 23HU for the blood, and 39HU (10-82HU) with mean SD 18 HU for the myocardium. The attenuation/SD of the blood were significantly higher than those of the myocardium (p<0.01). The inter-session variation was not significant. There was a poor correlation between SD of aortic blood/ventricle with fat thickness/noise. Based on existing models, 90 HU threshold offers a confidence interval of approximately 95% and 130 HU more than 99%.

Conclusions

Historical thresholds offer high confidence intervals for exclusion of aortic blood/myocardium and by the way for detecting calcifications. Nevertheless, considering the large variations of blood/myocardium CT values and the influence of patient’s characteristics, a better approach might be an adaptive threshold.     

Mobility of Indaziflam Influenced by Soil Properties in a Semi-Arid Area

Indaziflam, a broad-spectrum, pre-emergence herbicide was the focus of a field investigation conducted after the identification of sporadic injury symptoms on the pecan trees a few months after the application. The study was conducted in two pecan orchards located in southern New Mexico, USA, and southeastern Arizona, USA. The objectives of this study were to evaluate the occurrence and distribution of indaziflam in the soil profile of areas where pecan trees were injured (impacted) and areas where no injury symptoms were observed (unimpacted), and to determine the relationship between indaziflam concentrations and soil properties in those locations. Soil samples were collected, one year after applications, from six depth representing 0–7, 7–15, 15–30, 30–60, 60–90 and 90–120 cm depth to determine the concentration of indaziflam in impacted and unimpacted areas of the two orchards. Soil samples were analyzed to determine texture, bulk density, organic matter content, cation exchange capacity, pH, nitrate, chloride and calcium concentrations. The detection frequency of indaziflam was higher in Arizona than in New Mexico, likely due to the differences between the tillage practices and sand contents of the orchards. No significant correlations were observed between indaziflam and soil properties, however indaziflam was mostly detected in areas where pecan trees were unimpacted probably as result of greater organic matter content and soil porosity. More research is needed to understand the causes of injury to pecan trees by indaziflam application.     

Identification of bilateral changes in TID1 expression in the 6-OHDA rat model of Parkinson's disease

Parkinson's disease (PD) is a common neurodegenerative disease characterized by the loss of dopaminergic neurons in the substantia nigra and the aggregation of α-synuclein into Lewy bodies. Existing therapies address motor dysfunction but do not halt progression of the disease. A still unresolved question is the biochemical pathway that modulates the outcome of protein misfolding and aggregation processes in PD. The molecular chaperone network plays an important defensive role against cellular protein misfolding and has been identified as protective in experimental models of protein misfolding diseases like PD. Molecular mechanisms underlying chaperone-neuroprotection are actively under investigation. Current evidence implicates a number of molecular chaperones in PD including Hsp25, Hsp70 and Hsp90, however their precise involvement in the neurodegenerative cascade is unresolved. The J protein family (DnaJ or Hsp40 protein family) has long been known to be important in protein conformational processes.We assessed sensory and motor function of control and PD rats and then evaluated the brain region-specific expression levels of select J proteins by Western analysis. Surprisingly, we observed a widespread 26 kDa breakdown product of the J protein, TID1, (tumorous imaginal discs, mtHsp40 or DnaJ3) in a 6-hydroxydopamine (6-OHDA) rat model of PD in which food handling, gait symmetry and sensory performance were impaired. Greater behavioral deficits were associated with lower TID1 expression. Furthermore, direct application of either 6-OHDA or MPP+ (1-methyl-4-phenylpyridinum) to CAD (CNS-derived catecholinaminergic neuronal cell line) cell cultures, reduced TID1 expression levels.Our results suggest that changes in cellular TID1 are a factor in the pathogenesis of PD by impeding functional and structural compensation and exaggerating neurodegenerative processes. In contrast, no changes were observed in CSPα, Hsp40, Hsp70, Hsc70 and PrP(C) levels and no activation of caspase3 was observed. This study links TID1 to PD and provides a new target for therapeutics that halts the PD progression.     

On the trail of Neolithic mice and men towards Transcaucasia: zooarchaeological clues from Nakhchivan (Azerbaijan)

Transcaucasia comprises a key region for understanding the history of both the hybrid zone between house mouse lineages and the dispersal of the Neolithic way of life outside its Near Eastern cradle. The opportunity to document the colonization history of both men and mice in Transcaucasia was made possible by the discovery of mouse remains accumulated in pits from a 6000‐year‐old farming village in the Nakhchivan (Autonomous Republic of Nakhchivan, Azerbaijan). The present study investigated their taxonomy and most likely dispersal path through the identification of the Mus lineage to which they might belong using a geometric morphometric approach of dental traits distances between archaeological and modern populations of the different Mus lineages of South‐West Asia. We demonstrate that the mouse remains trapped in the deep storage pits of the dwelling belong to the Mus musculus domesticus from the Near East, with dental shapes similar to current populations in Northern Syria. These results strongly suggest that the domesticus lineage was dispersed into Transcaucasia from the upper Euphrates valley by Neolithic migration, some time between the 7th and 5th millennium BC, providing substantial evidence to back up the scenario featuring near‐eastern stimuli in the emergence of agriculture in the South Caucasus. The domesticus mitochondrial DNA signature of the current house mouse in the same location 5000 years later, as well as their turnover towards a subspecies musculus/castaneus phenotype, suggests that early domesticus colonizers hybridized with a later musculus (and maybe castaneus) dispersal originating from south of the Caspian Sea and/or Northern Caucasia. © 2013 The Linnean Society of London     

Re-evaluation of the taxonomic status of sand boas of the genus Eryx (Daudin, 1803) (Serpentes: Boidae) in north-eastern Iran using sequences of the mitochondrial genome

The sand boas of the genus Eryx (Daudin, 1803) comprise four species in northe-astern Iran: E. tataricus (Lichtenstein, 1823), E. miliaris (Pallas, 1773), E. elegans (Gray, 1849), and E. jaculus (Linnaeus, 1758). Based on a morphological study of the Eryx species in the area, a high similarity between E. tataricus and E. miliaris on the one side, and E. jaculus and E. elegans on the other side has been well documented, so that they are hardly distinguishable from each other. We analysed sequences of the mitochondrial cytochrome b gene of 29 individuals of morphotypes of this species complex in north-eastern Iran to clarify the phylogenetic relationships. Based on the branch pattern of the phylogenetic trees, the amounts of genetic distances within and between major clades and considering the morphological data, we concluded that the traditional grouping of species within the genus Eryx in north-eastern Iran should be fundamentally revised. We believe that E. elegans is conspecific with E. jaculus, and E. tataricus is conspecific with E. miliaris. Considering the principle of priority, the north-eastern populations of Eryx in Iran should be classified into only two distinct species: E. jaculus and E. miliaris.     

Cardioprotective effects of verapamil on myocardial structure and function in a murine model of chronic Trypanosoma cruzi infection (Brazil Strain): an echocardiographic study.

Verapamil has been shown to attenuate the extent of myocardial injury in murine models of chronic Trypanosoma cruzi infection. Infected mice treated with verapamil have significantly lower myocardial expression of inducible nitric oxide synthase and cytokines and substantially less inflammatory infiltrate and myocyte necrosis at necropsy. In the present study, we examined the cardiac structural and functional correlates of verapamil treatment in CD1 mice infected with the Brazil strain of T. cruzi using serial transthoracic echocardiography. There were four groups: uninfected- untreated control, uninfected-verapamil-treated, infected-untreated control, and infected-verapamil-treated. Verapamil was given in drinking water (1 gm/l) continuously from the day of infection for a total of 120 days. Mice were evaluated at baseline, 40 and 150 days p.i. Mice in the untreated-infected group compared with the mice in the infected-verapamil-treated group showed thinning of the left ventricular wall (0.84 +/- 0.02-vs-0.92 +/- 0.04, P<0.05 mm), increase in the left ventricular end-diastolic diameter (3.27 +/- 0.15-vs-2.74 +/- 0.05 mm, P<0.05) and reduction in percent fractional shortening (37 +/- 2-vs-53 +/- 4%, P<0.05). No differences in these parameters were noted among mice in the uninfected-untreated and uninfected-verapamil-treated groups. Furthermore, right ventricular dilation was more severe in mice from the infected-untreated group as compared with those in the infected- verapamil-treated group (visual grade 1.9 +/- 0.4-vs-1.0 +/- 0.2, P<0.05). At necropsy, the extent of myocardial injury, as determined histologically, was significantly greater in the infected-untreated mice. These data provide cardiac structural and functional correlates for the previously observed cardioprotective effects of verapamil in chronic chagasic cardiomyopathy.     

An information-based machine learning approach to elasticity imaging

An information-based technique is described for applications in mechanical property imaging of soft biological media under quasi-static loads. We adapted the Autoprogressive method that was originally developed for civil engineering applications for this purpose. The Autoprogressive method is a computational technique that combines knowledge of object shape and a sparse distribution of force and displacement measurements with finite-element analyses and artificial neural networks to estimate a complete set of stress and strain vectors. Elasticity imaging parameters are then computed from estimated stresses and strains. We introduce the technique using ultrasonic pulse-echo measurements in simple gelatin imaging phantoms having linear-elastic properties so that conventional finite-element modeling can be used to validate results. The Autoprogressive algorithm does not require any assumptions about the material properties and can, in principle, be used to image media with arbitrary properties. We show that by selecting a few well-chosen force–displacement measurements that are appropriately applied during training and establish convergence, we can estimate all nontrivial stress and strain vectors throughout an object and accurately estimate an elastic modulus at high spatial resolution. This new method of modeling the mechanical properties of tissue-like materials introduces a unique method of solving the inverse problem and is the first technique for imaging stress without assuming the underlying constitutive model.     

A quantitative synchronization model for smooth pursuit target tracking

We propose a quantitative model for human smooth pursuit tracking of a continuously moving visual target which is based on synchronization of an internal expectancy model of the target position coupled to the retinal target signal. The model predictions are tested in a smooth circular pursuit eye tracking experiment with transient target blanking of variable duration. In subjects with a high tracking accuracy, the model accounts for smooth pursuit and repeatedly reproduces quantitatively characteristic patterns of the eye dynamics during target blanking. In its simplest form, the model has only one free parameter, a coupling constant. An extended model with a second parameter, a time delay or memory term, accounts for predictive smooth pursuit eye movements which advance the target. The model constitutes an example of synchronization of a complex biological system with perceived sensory signals. Cognitive and Neurobiological Research Consortium in Traumatic Brain Injury (CNRC-TBI).     

Nitrate and ammonia: two key nitrogen sources for biomass and phycocyanin production by Arthrospira (Spirulina) platensis

Journal of Applied Phycology - Nitrogen plays a key role in the production of biomass and valuable pigments from Arthrospira platensis. The present research aimed to examine the effect of Zarrouk...