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Exploring invasibility with species distribution modeling: How does fire promote cheatgrass (Bromus tectorum) invasion within lower montane forests? 下载免费PDF全文
Aim
Cheatgrass (Bromus tectorum) is notorious for creating positive feedbacks that facilitate vegetation type conversion within sagebrush steppe ecosystems in the western United States. Similar dynamics may exist in adjacent lower montane forest. However, fire‐forest‐cheatgrass dynamics have not been examined. We used species distribution modeling to answer three questions about fire and invasibility in lower montane forests: (Q1) Does fire create more suitable habitat for cheatgrass? (Q2) If so, which site attributes are altered to increase site suitability? (Q3) Does fire increase connectivity among suitable habitat and enhance spread?Location
Shoshone National Forest, Wyoming, USA.Methods
We measured cheatgrass presence–absence in 93 plots within Interior Douglas‐fir (Pseudotsuga menziesii var. glauca) forests. Random Forests predicted cheatgrass distribution with and without fire using nine site attributes: elevation, slope, aspect, solar radiation, annual precipitation, maximum temperature in July, minimum temperature in January, forest canopy cover and distance to nearest trail or road. Additionally, invasion pathways and spread were mapped using Circuitscape.Results
Cheatgrass distribution was controlled by topographic and climate variables in the absence of fire. In particular, cheatgrass was most likely to occur at low elevation along dry, south‐ and east‐facing slopes. High‐severity fire increased potential cheatgrass distribution when forest canopy cover was reduced to below 30%. This process created new invasion pathways, which enhanced cheatgrass spread when modelled in Circuitscape.Main conclusions
Our study showed that in the absence of fire, drier south‐ and east‐facing slopes at low elevation are most susceptible to cheatgrass invasion. However, high‐severity fire increased the total area susceptible to invasion—allowing cheatgrass to expand into previously unsuitable sites within lower montane forests in the western United States. These results are important for present day management and reflect that integrating responses to disturbance in species distribution models can be critical for making predictions about dynamically changing systems.64.
Sebastian F. Barreto-Ortiz Shuming Zhang Matthew Davenport Jamie Fradkin Brian Ginn Hai-Quan Mao Sharon Gerecht 《PloS one》2013,8(11)
In microvascular vessels, endothelial cells are aligned longitudinally whereas several components of the extracellular matrix (ECM) are organized circumferentially. While current three-dimensional (3D) in vitro models for microvasculature have allowed the study of ECM-regulated tubulogenesis, they have limited control over topographical cues presented by the ECM and impart a barrier for the high-resolution and dynamic study of multicellular and extracellular organization. Here we exploit a 3D fibrin microfiber scaffold to develop a novel in vitro model of the microvasculature that recapitulates endothelial alignment and ECM deposition in a setting that also allows the sequential co-culture of mural cells. We show that the microfibers'' nanotopography induces longitudinal adhesion and alignment of endothelial colony-forming cells (ECFCs), and that these deposit circumferentially organized ECM. We found that ECM wrapping on the microfibers is independent of ECFCs'' actin and microtubule organization, but it is dependent on the curvature of the microfiber. Microfibers with smaller diameters (100–400 µm) guided circumferential ECM deposition, whereas microfibers with larger diameters (450 µm) failed to support wrapping ECM. Finally, we demonstrate that vascular smooth muscle cells attached on ECFC-seeded microfibers, depositing collagen I and elastin. Collectively, we establish a novel in vitro model for the sequential control and study of microvasculature development and reveal the unprecedented role of the endothelium in organized ECM deposition regulated by the microfiber curvature. 相似文献
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I Nikolaidis S Favini-Stabile A Dessen Mugdha Bhati David K Cole James McCluskey Andrew K Sewell Jamie Rossjohn Mark F Mabanglo Michael A Hast Nathan B Lubock Homme W Hellinga Lorena S Beese Alex L Zimmer James B Thoden Hazel M Holden 《Protein science : a publication of the Protein Society》2014,23(3):1-1
66.
James?A. Poulter Manir Ali David?F. Gilmour Aine Rice Hiroyuki Kondo Kenshi Hayashi David?A. Mackey Lisa?S. Kearns Jonathan?B. Ruddle Jamie?E. Craig Eric?A. Pierce Louise?M. Downey Moin?D. Mohamed Alexander?F. Markham Chris?F. Inglehearn Carmel Toomes 《American journal of human genetics》2016,98(3):592
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Broca's area, a cerebral cortical area located in the inferior frontal gyrus (IFG) of the human brain, has been identified as one of several critical regions associated with the motor planning and execution of language. Anatomically, Broca's area is most often larger in the left hemisphere, and functional imaging studies in humans indicate significant left-lateralized patterns of activation during language-related tasks. If, and to what extent, nonhuman primates, particularly chimpanzees, possess a homologous region that is involved in the production of their own communicative signals remains unknown. Here, we show that portions of the IFG as well as other cortical and subcortical regions in chimpanzees are active during the production of communicative signals. These findings are the first to provide direct evidence of the neuroanatomical structures associated with the production of communicative behaviors in chimpanzees. Significant activation in the left IFG in conjunction with other cortical and subcortical brain areas during the production of communicative signals in chimpanzees suggests that the neurological substrates underlying language production in the human brain may have been present in the common ancestor of humans and chimpanzees. 相似文献
69.
Kwok S. Wun Fiona Ross Onisha Patel Gurdyal S. Besra Steven A. Porcelli Stewart K. Richardson Santosh Keshipeddy Amy R. Howell Dale I. Godfrey Jamie Rossjohn 《The Journal of biological chemistry》2012,287(46):39139-39148
Human and mouse type I natural killer T (NKT) cells respond to a variety of CD1d-restricted glycolipid antigens (Ags), with their NKT cell antigen receptors (NKT TCRs) exhibiting reciprocal cross-species reactivity that is underpinned by a conserved NKT TCR-CD1d-Ag docking mode. Within this common docking footprint, the NKT TCR recognizes, to varying degrees of affinity, a range of Ags. Presently, it is unclear whether the human NKT TCRs will mirror the generalities underpinning the fine specificity of the mouse NKT TCR-CD1d-Ag interaction. Here, we assessed human NKT TCR recognition against altered glycolipid ligands of α-galactosylceramide (α-GalCer) and have determined the structures of a human NKT TCR in complex with CD1d-4′,4″-deoxy-α-GalCer and CD1d-α-GalCer with a shorter, di-unsaturated acyl chain (C20:2). Altered glycolipid ligands with acyl chain modifications did not affect the affinity of the human NKT TCR-CD1d-Ag interaction. Surprisingly, human NKT TCR recognition is more tolerant to modifications at the 4′-OH position in comparison with the 3′-OH position of α-GalCer, which contrasts the fine specificity of the mouse NKT TCR-CD1d-Ag recognition (4′-OH > 3′-OH). The fine specificity differences between human and mouse NKT TCRs was attributable to differing interactions between the respective complementarity-determining region 1α loops and the Ag. Accordingly, germline encoded fine-specificity differences underpin human and mouse type I NKT TCR interactions, which is an important consideration for therapeutic development and NKT cell physiology. 相似文献
70.
A rapid and sensitive fluorescence-based bioassay for determination of indoleamine 2,3-dioxygenase (IDO) activity has been developed. This assay relies on the quantification of the amount of kynurenine produced in the assay medium by fluorescence and complements the standard absorbance and high-performance liquid chromatography (HPLC) assay methods. The fluorescence method has limits of detection similar to those of the standard assay methods. Measured activities of IDO, including in the presence of tryptophan-based inhibitors, were in statistical agreement with the absorbance and HPLC assay methods. The fluorescence-based assay was also suitable for assessment of IDO inhibition by compounds that are incompatible with the absorbance method. 相似文献