基于动力学模型的法夫酵母发酵生产虾青素的补料策略优化

对法夫酵母的不同补料发酵方式进行了研究.基于底物抑制模型,提出了一种优化的两阶段补料策略,用于法夫酵母产虾青素的高密度发酵.在发酵的延迟期和对数生长期早期,糖浓度控制在25 g/L左右,在此条件下,生物量可以达到最大,且时间缩短.在对数生长期后期及稳定期,糖浓度控制在5 g/L,虾青素的合成时间可以有效延长.与传统的补料方式相比,采用此补料策略取得了较好的发酵效果.发酵终点细胞干重达到23.8g/L,虾青素产量达到29.05 mg/L,分别比分批发酵提高了52.8%和109%.     

光周期对光敏核不育水稻光敏色素A含量及其mRNA丰度的影响

光敏核不育水稻(农垦58S)是我国特有的水稻(Oryza sativa L.)种质材料,光敏色素是光周期诱导其育性转变的受体。报道了育性转换敏感期间的光周期处理对农垦58S及对照“农垦58”叶片中光敏色素A(Phy A)含量及其mRNA丰度的影响。在10个光周期处理的最后一个暗期结束前,收获每株水稻的上部两片叶,用酶联免疫吸附测定法测定Phy A。和长日照(LD)相比,短日照(SD)处理导致农垦58SPhy A相对含量增加38.5％;而“农垦58”只增加18.5％。显然,在较长的暗期中,农垦58S中Phy A的积累比对照快。在水稻幼苗中也得出相似的结果。以光敏色素A基因(phy A)的特异性片段RPA3作探针,用RNA斑点杂交的方法对叶片中Phy A mRNA丰度进行分析的结果表明,光周期处理5d和10d时,两品种水稻的Phy A mRNA丰度都是SD处理的比LD的高,而且SD下农垦58S Phy A mRNA的丰度均比“农垦58”的高。这些结果表明,甲基化水平较低的农垦58S phy A可能比“农垦58”的phy A更活跃地表达。另外,在育性转换敏感期每日主光期结束时(EOD)进行10次短暂的远红光(FR)照射。结果表明,农垦58S植株抽穗和开花期比SD处理推迟2d,而花粉败育率、种子结实率却无变化。暗示农垦58S开花和育性转变过程的光周期反应可能不同。     

自然保护地生物多样性保护研究进展

建立自然保护地是保护生物多样性最为重要的措施之一。总体来看, 自然保护地生物多样性保护研究主要围绕关键生态系统以及珍稀濒危物种等保护对象的状态以及变化两个层面进行, 并重点关注自然保护地数量与面积、保护了多少重要生态系统和物种、能否有效保护生物多样性等一系列科学问题。然而, 在自然保护地生物多样性保护研究方面, 还缺少针对上述研究领域的系统性综述。为此, 本文系统梳理了自然保护地空间布局及其与生物多样性分布的关系、自然保护地生物多样性变化及其保护成效等近20年来相关领域的研究进展。自然保护地的空间布局以及与生物多样性分布的关系主要围绕自然保护地与生物多样性在某一阶段的状态开展研究, 致力于探究自然保护地“保护多少” “代表性如何” “在哪儿保护”等一系列关键科学问题。同时, 自然保护地内的生物多样性会随着气候变化、人类活动以及自身演替等发生时空动态变化, 基于自然保护地生物多样性变化分析, 各国学者在全球尺度、国家尺度和单个自然保护地进行了大量的保护成效评估研究, 并逐渐发展出了自然保护地内外配对分析方法以提升保护成效评估的精度, 进而识别出不同自然保护地的主要影响因素。在此基础上, 本文进一步对自然保护地生物多样性保护研究提出了展望, 主要包括: (1)综合考虑自然保护地生物多样性状态和变化; (2)开展多目标协同的自然保护地空间优化布局; (3)强化自然保护地主要保护对象的识别、调查与监测; (4)提升自然保护地的质量和连通性; (5)探究自然保护地管理措施与保护成效的关联机制。本文可为“2020年后全球生物多样性框架”的制定与实施特别是在自然保护地体系建设与优化方面提供参考与借鉴。     

黄河流域生态安全屏障防风固沙时空变化及驱动因素

黄河流域是我国重要的生态屏障和经济区,防风固沙服务及其驱动机制的研究对于筑牢黄河流域生态安全屏障具有重要意义。基于修正土壤风蚀模型(RWEQ)定量评估黄河流域2000—2018年防风固沙服务时空变化,采用相关分析和地理加权回归模型(GWR)从社会、气候、土壤、植被、地形等角度探究各驱动因素对黄河流域防风固沙服务影响的空间异质性。结果表明：(1)2000—2018年黄河流域土壤风蚀模数与单位面积防风固沙量分别以0.04 t hm^-2 a^-1和0.14 t hm^-2 a^-1的速率下降,而防风固沙保有率和植被覆盖度则分别以0.05%·a^-1和0.26%·a^-1的速率上升。(2)黄河流域土壤风蚀以微度(<2 t hm^-2 a^-1)和轻度(2—25 t hm^-2 a^-1)为主,共占研究区面积的96.28%。土壤风蚀在空间分布呈现西北高东南低的特点,而防风固沙服务高值则主要分...     

Identification of Important Nodes in Directed Biological Networks: A Network Motif Approach

Identification of important nodes in complex networks has attracted an increasing attention over the last decade. Various measures have been proposed to characterize the importance of nodes in complex networks, such as the degree, betweenness and PageRank. Different measures consider different aspects of complex networks. Although there are numerous results reported on undirected complex networks, few results have been reported on directed biological networks. Based on network motifs and principal component analysis (PCA), this paper aims at introducing a new measure to characterize node importance in directed biological networks. Investigations on five real-world biological networks indicate that the proposed method can robustly identify actually important nodes in different networks, such as finding command interneurons, global regulators and non-hub but evolutionary conserved actually important nodes in biological networks. Receiver Operating Characteristic (ROC) curves for the five networks indicate remarkable prediction accuracy of the proposed measure. The proposed index provides an alternative complex network metric. Potential implications of the related investigations include identifying network control and regulation targets, biological networks modeling and analysis, as well as networked medicine.     

通过快速荧光动力学曲线探测白黄瓜光系统Ⅱ的热激胁迫效应

以耐热性较强的短粗型白黄瓜和长棒型白黄瓜为试材,并以耐热性较差的‘新泰密刺'和耐热性较强的‘津春4号'为对照品种,经热激胁迫后采用植物效率仪PEA测试,进行光系统Ⅱ(PSⅡ)快速叶绿素荧光诱导动力学分析(JIP-test)及其热稳定性的热力学分析.随着热激胁迫温度的升高(在30～57 ℃下5 min),表现为PSⅡ的最大光化学效率Fv/Fm、单位面积的光合机构含有的反应中心数目RC/CSo、放氧复合体活性ρk呈"S"型下降趋势;单位反应中心以热能形式耗散的能量DIo/RC呈"S"型上升趋势.综合分析反映出热激胁迫下PSⅡ反应中心的可逆失活、放氧复合体(OEC)的钝化和热耗散的三重机制在保护PSⅡ防止光抑制中起到重要作用.热激胁迫温度超过30 ℃时ρk就开始下降;超过40 ℃时RC/CSo开始下降;超过44 ℃以上,PSⅡ热耗散能力DIo/RC才表现出增加;超过51℃时,会加重耐热性较差的新泰密刺品种PSⅡ热耗散机构对PSⅡ保护的负担.通过标准状态变性自由能变ΔGD计算的变性中点温度Tm表明,PSⅡ蛋白复合体的热稳定性优于PSⅡ反应中心复合体热的稳定性和放氧复合体(OEC)的热稳定性.对于Fv/Fm、RC/CSo、和ρk的Tm均呈现出津春4号耐热性较强,新泰密刺耐热性较差,长棒型白黄瓜和短粗型白黄瓜耐热性居中.     

Betulinic and oleanolic acids isolated from Forsythia suspensa Vahl inhibit urease activity of Helicobacter pylori

Sixteen medicinal herbs were selected from a database on traditional herbal materials as well as literature on Korean plant resources. Then ethanol (70%, v/v) extracts of these herbs were tested for inhibition of the urease activity of Helicobacter pylori. The urease activity of H. pylori was strongly (82%) inhibited by extract of Forsythia suspensa Vahl. Active compounds in extract of Forsythia suspensa Vahl were first separated by batch mode solvent extraction, followed by purification by silica gel and octadecyl silica gel column chromatography using solvents of different polarity. According to NMR analysis of the last chromatographic fraction, we identified the presence of betulinic acid and oleanolic acid, which are known to have anti-inflammatory, anti-cancer, and anti-HIV viral activities.     

Microbiological Processes of the Carbon and Sulfur Cycles at Cold Methane Seeps of the North Atlantic

Functioning of microbial communities in surface sediments of the Haakon Mosby underwater mud volcano (lat. 72°N) and in gas seepage fields of the Vestnesa Ridge was investigated using Mir-1 and Mir-2 deep-sea submersibles during the 40th voyage of the research vessel Academician Mstislav Keldysh. Large areas of sedimentary deposits of the Haakon Mosby mud volcano (HMMV) and pockmarks of the Vestnesa Ridge (VR) are covered with bacterial mats 0.1 to 0.5 cm thick. The microbial community making up bacterial mats of the HMMV was dominated by large filamentous bacteria with filaments measuring up to 100 m in length and 2 to 8 m in width. The occurrence of rosettes allowed the observed filamentous bacteria to be referred to the morphologically similar genera Leucothrix or Thiothrix. Three morphological types of filamentous bacteria were identified in bacterial mats covering VR pockmarks. Filaments of type one are morphologically similar with representatives of the genera Thioploca or Desmanthos. Type two filaments had numerous inclusions of sulfur and resembled representatives of the genus Thiothrix. The third morphological type was constituted by single filaments made up of tightly connected disk-like cells and can be assigned to the genus Beggiatoa. The rates of methane oxidation (up to 1570 l C/(dm³ day)) and sulfate reduction (up to 17 mg S/(dm³day)) measured in the surface sediments of HMMV and VR were close to the maximum rates of these processes observed in heavily polluted regions of the northwestern shelf of the Black Sea. High rates of microbiological processes correlated with the high number of bacteria. The rate of methane production in sediments studied was notably lower and ranged from 0.1 to 3.5 CH₄/(dm³ day). Large areas of the HMMV caldera were populated by pogonophoras, represented by the two species Sclerolinum sp. and Oligobrachia sp. The mass development of Sclerolinum sp. in the HMMV caldera was by the activity of aerobic methane-oxidizing bacteria localized inside the cells of these animals. Bacterial cells were also found in the trophosome tissue of Oligobrachia sp., but in cells of these bacteria, we did not observe the membrane structures typical of methanotrophs. The localization pattern of pogonophoras on the surface of reduced sediments suggests that the predominant bacteria in Oligobrachia tissues are sulfur-oxidizing endosymbionts.     

甘草水溶物诱导MGC-803细胞凋亡中胞内Ca2+、pH与线粒体△ψm的变化

细胞凋亡时发生染色质凝聚、DNA呈梯状片段化、胞体皱缩、质膜起泡、形成凋亡小体等典型的形态和生化变化,并受凋亡信号系统激活所导致的细胞内一系列酶的活性以及凋亡相关基因表达的变化调控.近年来的研究表明,细胞内Ca2 、pH、线粒体膜电位(△Ψm)等生物物理性状的改变与细胞凋亡信号系统的调控有密切的关系,甚至是决定性的因素.糖皮质激素能非常有效地诱导胸腺细胞发生凋亡,已证实在这典型的凋亡过程中,细胞内Ca2 浓度变化是至为重要的环节,处理细胞早期就可见到细胞内Ca2 的持续升高,然后是DNA片段化.尽管也有文献报道在无Ca2 基质…