Assessment of contrafreeloading preferences in giraffe (Giraffa camelopardalis)

Contrafreeloading is an intriguing phenomenon in which animals will work to obtain resources, such as food, when the same resource is simultaneously freely available. Multiple hypotheses exist for why animals might choose to contrafreeload. In this study, we assessed preferences for contrafreeloading in giraffe at the Bronx Zoo to determine whether they actually preferred to contrafreeload or were simply demonstrating a willingness to contrafreeload. Food was presented in a range of distributions between an easily accessed feeding device and a more challenging one and the giraffes’ feeding behavior at these two types of feeding devices was recorded. As the experiments progressed, more giraffe used these more challenging feeders. There was significant individual variation in the expression of preference for contrafreeloading and willingness to contrafreeload. Individual, phase of the experiment, and an interaction between these factors were significant predictors of challenge feeder use. Three foraging strategies emerged among the giraffe that we termed “freeloaders,” “contrafreeloaders,” and “opportunists.” The results of this study demonstrate that multiple indices of preference are necessary when assessing contrafreeloading behavior, and that giraffe are affected to different degrees by the factors that stimulate contrafreeloading. These results may shed light on why different individuals use complex feeding enrichment devices to varying extents.     

Responses of soil carbon sequestration to climate‐smart agriculture practices: A meta‐analysis

Climate‐smart agriculture (CSA) management practices (e.g., conservation tillage, cover crops, and biochar applications) have been widely adopted to enhance soil organic carbon (SOC) sequestration and to reduce greenhouse gas emissions while ensuring crop productivity. However, current measurements regarding the influences of CSA management practices on SOC sequestration diverge widely, making it difficult to derive conclusions about individual and combined CSA management effects and bringing large uncertainties in quantifying the potential of the agricultural sector to mitigate climate change. We conducted a meta‐analysis of 3,049 paired measurements from 417 peer‐reviewed articles to examine the effects of three common CSA management practices on SOC sequestration as well as the environmental controlling factors. We found that, on average, biochar applications represented the most effective approach for increasing SOC content (39%), followed by cover crops (6%) and conservation tillage (5%). Further analysis suggested that the effects of CSA management practices were more pronounced in areas with relatively warmer climates or lower nitrogen fertilizer inputs. Our meta‐analysis demonstrated that, through adopting CSA practices, cropland could be an improved carbon sink. We also highlight the importance of considering local environmental factors (e.g., climate and soil conditions and their combination with other management practices) in identifying appropriate CSA practices for mitigating greenhouse gas emissions while ensuring crop productivity.     

Nuclear import of CaMV P6 is required for infection and suppression of the RNA silencing factor DRB4

Replication of Cauliflower mosaic virus (CaMV), a plant double-stranded DNA virus, requires the viral translational transactivator protein P6. Although P6 is known to form cytoplasmic inclusion bodies (viroplasms) so far considered essential for virus biology, a fraction of the protein is also present in the nucleus. Here, we report that monomeric P6 is imported into the nucleus through two importin-alpha-dependent nuclear localization signals, and show that this process is mandatory for CaMV infectivity and is independent of translational transactivation and viroplasm formation. One nuclear function of P6 is to suppress RNA silencing, a gene regulation mechanism with antiviral roles, commonly counteracted by dedicated viral suppressor proteins (viral silencing suppressors; VSRs). Transgenic P6 expression in Arabidopsis is genetically equivalent to inactivating the nuclear protein DRB4 that facilitates the activity of the major plant antiviral silencing factor DCL4. We further show that a fraction of P6 immunoprecipitates with DRB4 in CaMV-infected cells. This study identifies both genetic and physical interactions between a VSR to a host RNA silencing component, and highlights the importance of subcellular compartmentalization in VSR function.     

Genetic variation in threshold reaction norms for alternative reproductive tactics in male Atlantic salmon, Salmo salar

Alternative reproductive tactics may be a product of adaptive phenotypic plasticity, such that discontinuous variation in life history depends on both the genotype and the environment. Phenotypes that fall below a genetically determined threshold adopt one tactic, while those exceeding the threshold adopt the alternative tactic. We report evidence of genetic variability in maturation thresholds for male Atlantic salmon (Salmo salar) that mature either as large (more than 1 kg) anadromous males or as small (10-150 g) parr. Using a common-garden experimental protocol, we find that the growth rate at which the sneaker parr phenotype is expressed differs among pure- and mixed-population crosses. Maturation thresholds of hybrids were intermediate to those of pure crosses, consistent with the hypothesis that the life-history switch points are heritable. Our work provides evidence, for a vertebrate, that thresholds for alternative reproductive tactics differ genetically among populations and can be modelled as discontinuous reaction norms for age and size at maturity.     

Microbial Nitrogen Cycling Processes in a Sulfidic Coastal Marsh

Sulfide distribution is a key controller of vegetation zonation in coastal ecosystems, but data are limited regarding its impact on the spatial distribution of important N cycling processes. We assessed vegetation distribution and density and, mineral N pool sizes, composition and transformations in a sulfidic coastal marsh in relation to distance from sulfur springs. We observed strong relationships between vegetation attributes (species and density) and mineral N status with greater total inorganic N, NO₃⁻ and denitrification enzyme activity (DEA) in sediment samples from areas populated by Crithmum maritimum (mid-way between S springs and sea shore) than in sediments from areas colonized by either Agropyron repens (closest to the S springs) or mangrove (Rhizophora mangleL., farthest from the springs). Our data also suggest close links between N cycling and SO₄⁻² reduction. The latter resulted in net release of NH₄⁺ ranging from 0.9 mg N kg⁻¹ in the low density C. maritimum to 3.2 mg N kg⁻¹ in the high-density A. repens, during a 3-day incubation. We also tested for microbial adaptation to long-term high sulfide exposure by measuring DEA using the C₂H₂ block method (which has been found to be strongly affected by the presence of sulfide) and amendment of marsh sediment samples with NaMoO₄ to suppress reduced S production. In sediments extracted from sites near the sulfur springs (A. repens and C. maritimum), the C₂H₂ blockage assay yielded similar results without and with NaMoO₄ addition. However, in samples from a mangrove located further downstream from the springs, DEA was substantially lower (2.3 vs. 6.8 mg N₂O-N kg⁻¹ sediment d⁻¹) when production of reduced S was not inhibited by NaMoO₄. These results suggest that denitrifying microbes in the high sulfide areas may have adapted to the presence of sulfide, allowing for high rates of N and S cycling to occur simultaneously in these marshes.     

Are feeding preferences of white-tailed deer related to plant constituents?

Controlled feeding experiments can provide valuable insights into food selection of herbivores. We conducted cafeteria trials on captive yearling white-tailed deer (Odocoileus virginianus) during 2 years to determine feeding preferences in relation to plant chemical constituents, i.e., nitrogen and fibers. We simultaneously offered 8 species of cultivated and wild plants in monthly foraging trials conducted from June to October. We predicted that species preferences would be positively related to protein content from June to August and to digestible energy in September and October. As predicted, crude protein (CP) was positively related to feeding preferences, particularly as summer progressed. Feeding preferences were also negatively related to fiber content, especially in early summer. Our results indicate high protein needs over the complete growing season for yearling deer but a decrease in overall plant selectivity as summer progresses. Our results also suggest that deer browsing on cultivated plants might be due to higher CP content of cultivated plants than wild plants. To prevent deer impact on crops, managers should favor regeneration of plants rich in CP content in forests. © 2011 The Wildlife Society.     

Methylene Blue Protects against TDP-43 and FUS Neuronal Toxicity in C. elegans and D. rerio

The DNA/RNA-binding proteins TDP-43 and FUS are found in protein aggregates in a growing number of neurodegenerative diseases, including amyotrophic lateral sclerosis (ALS) and related dementia, but little is known about the neurotoxic mechanisms. We have generated Caenorhabditis elegans and zebrafish animal models expressing mutant human TDP-43 (A315T or G348C) or FUS (S57Δ or R521H) that reflect certain aspects of ALS including motor neuron degeneration, axonal deficits, and progressive paralysis. To explore the potential of our humanized transgenic C. elegans and zebrafish in identifying chemical suppressors of mutant TDP-43 and FUS neuronal toxicity, we tested three compounds with potential neuroprotective properties: lithium chloride, methylene blue and riluzole. We identified methylene blue as a potent suppressor of TDP-43 and FUS toxicity in both our models. Our results indicate that methylene blue can rescue toxic phenotypes associated with mutant TDP-43 and FUS including neuronal dysfunction and oxidative stress.