Non-invasive measurements of leaf epidermal transmittance of UV radiation using chlorophyll fluorescence: field and laboratory studies

Ratios of chlorophyll fluorescence induced by ultraviolet (UV) and bluegreen (BG) radiation [F(UV)/F(BG)] were determined with a Xe‐PAM fluorometer to test the utility of this technique as a means of non‐intrusively assessing changes in the pigmentation and optical properties of leaves exposed to varying UV exposures under laboratory and field conditions. For plants of Vicia faba and Brassica campestris, grown under controlled‐environmental conditions, F(UV‐B)/F(BG) was negatively correlated with whole‐leaf UV‐B‐absorbing pigment concentrations. Fluorescence ratios of V. faba were similar to, and positively correlated with (r²=0.77 [UV‐B]; 0.85 [UV‐A]), direct measurements of epidermal transmittance made with an integrating sphere. Leaves of 2 of 4 cultivars of field‐grown Glycine max exposed to near‐ambient solar UV‐B at a mid‐latitude site (Buenos Aires, Argentina, 34° S) showed significantly lower abaxial F(UV‐B)/F(BG) values (i.e., lower UV‐B epidermal transmittance) than those exposed to attenuated UV‐B, but solar UV‐B reduction had a minimal effect on F(UV‐B)/F(BG) in plants growing at a high‐latitude site (Tierra del Fuego, Argentina, 55° S). Similarly, the exotic Taraxacum officinale did not show significant changes in F(UV‐B)/F(BG) when exposed to very high supplemental UV‐B (biologically effective UV‐B=14–15 kJ m^?2 day^?1) in the field in Tierra del Fuego, whereas a native species, Gunnera magellanica, showed significant increases in F(UV‐B)/F(BG) relative to those receiving ambient UV‐B. These anomalous fluorescence changes were associated with increases in BG‐absorbing pigments (anthocyanins), but not UV‐B‐absorbing pigments. These results indicate that non‐invasive estimates of epidermal transmittance of UV radiation using chlorophyll fluorescence can detect changes in pigmentation and leaf optical properties induced by UV‐B radiation under both field and laboratory conditions. However, this technique may be of limited utility in cold environments where UV and low temperatures can stimulate the production of BG‐absorbing pigments that interfere with these indirect measurements of UV‐transmittance.     

Ice Nucleation Induced by Pseudomonas syringae

Broth cultures of suspensions of Pseudomonas syringae isolated from decaying alder leaves (Alnus tenuifolia) were found to freeze at very warm (-1.8 to -3.8 C) temperatures. The initiation of freezing appears associated with the intact cell and not with extracellular material. Chemical treatments and physical destruction of the cell destroy activity. Bacteria must be in concentrations of approximately 10(6)/ml before freezing at warm temperatures occurs.     

Sensitive fluorescence in situ hybridization signal detection in maize using directly labeled probes produced by high concentration DNA polymerase nick translation

The signal produced by fluorescence in situ hybridization (FISH) often is inconsistent among cells and sensitivity is low. Small DNA targets on the chromatin are difficult to detect. We report here an improved nick translation procedure for Texas red and Alexa Fluor 488 direct labeling of FISH probes. Brighter probes can be obtained by adding excess DNA polymerase I. Using such probes, a 30 kb yeast transgene, and the rp1, rp3 and zein multigene clusters were clearly detected.     

Internal filters: Prospects for UV-acclimation in higher plants

Wavelength-selective absorption of solar radiation within plant leaves allows penetration of visible radiation (400–700 nm) to the chloroplasts, while removing much of the damaging ultraviolet-B (UV-B, 280–320 nm) radiation. Flavonoids are important in this wavelength-selective absorption. Induction of flavonoid synthesis by solar radiation, and specifically by UV-B radiation, is discussed as this relates to the potential acclimation of plants to enhanced solar UV-B radiation that would result from stratospheric ozone reduction.     

Factors associated with the development of cross-reactive neutralizing antibodies during human immunodeficiency virus type 1 infection

The characterization of the cross-reactive, or heterologous, neutralizing antibody responses developed during human immunodeficiency virus type 1 (HIV-1) infection and the identification of factors associated with their generation are relevant to the development of an HIV vaccine. We report that in healthy HIV-positive, antiretroviral-naïve subjects, the breadth of plasma heterologous neutralizing antibody responses correlates with the time since infection, plasma viremia levels, and the binding avidity of anti-Env antibodies. Anti-CD4-binding site antibodies are responsible for the exceptionally broad cross-neutralizing antibody responses recorded only in rare plasma samples. However, in most cases examined, antibodies to the variable regions and to the CD4-binding site of Env modestly contributed in defining the overall breadth of these responses. Plasmas with broad cross-neutralizing antibody responses were identified that targeted the gp120 subunit, but their precise epitopes mapped outside the variable regions and the CD4-binding site. Finally, although several plasmas were identified with cross-neutralizing antibody responses that were not directed against gp120, only one plasma with a moderate breadth of heterologous neutralizing antibody responses contained cross-reactive neutralizing antibodies against the 4E10 epitope, which is within the gp41 transmembrane subunit. Overall, our study indicates that more than one pathway leads to the development of broad cross-reactive neutralizing antibodies during HIV infection and that the virus continuously escapes their action.     

Pathways of assessing agroecosystem health and agroecosystem management

Intrusive agriculture development, searching for higher profitability, has inflicted permanent damage to agroecosystems. Rapid deterioration of structure and functional properties in agroecosystems has intensified the need for research on agroecosystem health and agroecosystem management. This paper describes the concept of agroecosystem health which plays an important conceptual role in evaluating agroecosystem and agricultural research. Firstly, the development of agroecosystem health research is reviewed, and agroecosystem health from various dimensions is provided. Then, the methods and general criterias of agroecosystem health assessment are outlined, and a model for evaluating agroecosystem health is established. Finally, pathways of agroecosystem management from a holistic dimension are proposed to promote agroecosystem health and provide a scientific basis for making science-based policy decisions and formulating new plans in agricultural development.     

Structural determinants of calmodulin binding to the intracellular C-terminal domain of the metabotropic glutamate receptor 7A

Calmodulin (CaM) binds in a Ca2+-dependent manner to the intracellular C-terminal domains of most group III metabotropic glutamate receptors (mGluRs). Here we combined mutational and biophysical approaches to define the structural basis of CaM binding to mGluR 7A. Ca2+/CaM was found to interact with mGluR 7A primarily via its C-lobe at a 1:1 CaM:C-tail stoichiometry. Pulldown experiments with mutant CaM and mGluR 7A C-tail constructs and high resolution NMR with peptides corresponding to the CaM binding region of mGluR 7A allowed us to define hydrophobic and ionic interactions required for Ca2+/CaM binding and identified a 1-8-14 CaM-binding motif. The Ca2+/CaM.mGluR 7A peptide complex displays a classical wraparound structure that closely resembles that formed by Ca2+/CaM upon binding to smooth muscle myosin light chain kinase. Our data provide insight into how Ca2+/CaM regulates group III mGluR signaling via competition with intracellular proteins for receptor-binding sites.     

SNP frequency, haplotype structure and linkage disequilibrium in elite maize inbred lines

Background  

Recent studies of ancestral maize populations indicate that linkage disequilibrium tends to dissipate rapidly, sometimes within 100 bp. We set out to examine the linkage disequilibrium and diversity in maize elite inbred lines, which have been subject to population bottlenecks and intense selection by breeders. Such population events are expected to increase the amount of linkage disequilibrium, but reduce diversity. The results of this study will inform the design of genetic association studies.     

Carbon isotope ratios of soil organic matter and their use in assessing community composition changes in Curlew Valley,Utah

Summary Stable carbon isotope ratios of roots and soil organic matter were measured in Curlew Valley, Utah to determine if changes in the relative dominance of two shrub species had occurred in this salt-desert community. Measurements were made on soil cores along transects stretching from monospecific stands of Ceratoides lanata, a C₃ shrub, to monospecific stands of Atriplex confertifolia, a C₄ shrub. ¹³C values of roots and soil organic matter under Ceratoides cover appeared to be in equilibrium with the current plant community. By contrast, ¹³C values of roots and soils under Atriplex portions of the transects were more negative than would be expected for a C₄-dominated community. These results indicate that a change in relative C₃/C₄ dominance has occurred, and suggest that the C₄ shrub Atriplex confertifolia is increasing in importance in this salt-desert community.