Regulatory effects of lncRNA ATB targeting miR-200c on proliferation and apoptosis of colorectal cancer cells

This investigation was intended to elucidate whether long noncoding RNA (lncRNA)-activated by transforming growth factor-β (ATB) interacting with miR-200c could mediate colorectal cancer (CRC) progression, offering potential strategies for diagnosing and treating CRC. Here totally 315 patients with CRC were recruited, and their CRC tissues and adjacent normal tissues were gathered. Concurrently, four colon cancer cell lines (ie, SW620, Lovo, HCT116, and SW480) and the human colon mucosal epithelial cell line (NCM460) were also purchased. Moreover, si-ATB, si-NC, miR-200c mimic, miR-200c inhibitor, and miR-NC were prepared for transfection into the CRC cells, and their effects on CRC cell lines were evaluated based on the conduction of 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide assay, colony formation assay, and flow cytometry assay. Eventually, the Luciferase reporter gene assay was carried out to judge if there existed a targeted relationship between ATB and miR-200c. The results of Cox regression analyses suggested that overexpressed lncRNA ATB, underexpressed miR-200c, poor tumor differentiation, lymph-vascular invasion, and perineural invasion were symbolic of shortened survival of the patients with CRC (all P < .05). Besides, transfection of pcDNA3.1-ATB and miR-200c inhibitor could boost the viability and proliferation of Lovo and SW620 cell lines (all P < .05). Meanwhile, the expressions of p53 and p21 were also reduced under treatments of pcDNA3.1-ATB and miR-200c inhibitor (P < .05). In addition, CDK2 seemed to reverse the contribution of miR-200c to intensifying viability and proliferation of Lovo and SW420 cell lines (P < .05). Furthermore, ATB might downregulate miR-200c expression by targeting it (P < .05), and CDK2 was subjected to dual regulation of both ATB and miR-200c (P < .05). In conclusion, the lncRNA ATB/miR-200c/CDK2 signaling was responsible for intensified proliferation and prohibited apoptosis of CRC cells, which might provide effective approaches for diagnosing and treating CRC.     

Midday stomatal conductance is more related to stem rather than leaf water status in subtropical deciduous and evergreen broadleaf trees

Midday depressions in stomatal conductance (g_s) and photosynthesis are common in plants. The aim of this study was to understand the hydraulic determinants of midday g_s, the coordination between leaf and stem hydraulics and whether regulation of midday g_s differed between deciduous and evergreen broadleaf tree species in a subtropical cloud forest of Southwest (SW) China. We investigated leaf and stem hydraulics, midday leaf and stem water potentials, as well as midday g_s of co‐occurring deciduous and evergreen tree species. Midday g_s was correlated positively with midday stem water potential across both groups of species, but not with midday leaf water potential. Species with higher stem hydraulic conductivity and greater daily reliance on stem hydraulic capacitance were able to maintain higher stem water potential and higher g_s at midday. Deciduous species exhibited significantly higher stem hydraulic conductivity, greater reliance on stem capacitance, higher stem water potential and g_s at midday than evergreen species. Our results suggest that midday g_s is more associated with midday stem than with leaf water status, and that the functional significance of stomatal regulation in these broadleaf tree species is probably for preventing stem xylem dysfunction.     

Complete sequence of the mitochondrial genome of Odontamblyopus rubicundus (Perciformes: Gobiidae): genome characterization and phylogenetic analysis

Odontamblyopus rubicundus is a species of gobiid fishes, inhabits muddy-bottomed coastal waters. In this paper, the first complete mitochondrial genome sequence of O. rubicundus is reported. The complete mitochondrial genome sequence is 17119 bp in length and contains 13 protein-coding genes, two rRNA genes, 22 tRNA genes, a control region and an L-strand origin as in other teleosts. Most mitochondrial genes are encoded on H-strand except for ND6 and seven tRNA genes. Some overlaps occur in protein-coding genes and tRNAs ranging from 1 to 7 bp. The possibly nonfunctional L-strand origin folded into a typical stem-loop secondary structure and a conserved motif (5^′-GCCGG-3^′) was found at the base of the stem within the tRNA ^Cys gene. The TAS, CSB-2 and CSB-3 could be detected in the control region. However, in contrast to most of other fishes, the central conserved sequence block domain and the CSB-1 could not be recognized in O. rubicundus, which is consistent with Acanthogobius hasta (Gobiidae). In addition, phylogenetic analyses based on different sequences of species of Gobiidae and different methods showed that the classification of O. rubicundus into Odontamblyopus due to morphology is debatable.     

Diethylmaleate and iodoacetate in combination caused profound cell death in astrocytes

Energy failure and oxidative stress have been implicated in the pathogenesis of ischemia. Here, we report a potential link between cytosolic phospholipase A₂ (cPLA₂) activation and energy failure/oxidative stress‐induced astrocyte damage involving reactive oxygen species (ROS), protein kinase C‐α (PKC‐α), Src, Raf, and extracellular signal‐regulated kinase (ERK) signaling and concurrent elevation of endogenous chelatable zinc. Energy failure and oxidative stress were produced by treating astrocytes with glycolytic inhibitor iodoacetate and glutathione chelator diethylmaleate, respectively. Diethylmaleate and iodoacetate in combination caused augmented damage to astrocytes in a time‐ and concentration‐dependent manner. The cell death caused by diethylmaleate/iodoacetate was accompanied by increased ROS generation, PKC‐α membrane translocation, Src, Raf, ERK, and cPLA₂ phosphorylation. Pharmacological studies revealed that these activations all contributed to diethylmaleate/iodoacetate‐induced astrocyte death. Intriguingly, the mobilization of endogenous chelatable zinc was observed in diethylmaleate/iodoacetate‐treated astrocytes. Zinc appears to act as a downstream mediator in response to diethylmaleate/iodoacetate treatment because of the attenuating effects of its chelator N,N,N′,N′‐tetrakis(2‐pyridylmethyl)ethylenediamine. These observations indicate that ROS/PKC‐α, Src/Raf/ERK signaling and cPLA₂ are active participants in diethylmaleate/iodoacetate‐induced astrocyte death and contribute to a vicious cycle between the depletion of ATP/glutathione and the mobilization of chelatable zinc as critical upstream effectors in initiating cytotoxic cascades.

     

Macroinvertebrate community structure,secondary production and trophic‐level dynamics in urban streams affected by non‐point‐source pollution

1. Despite non‐point‐source (NPS) pollution being perhaps the most ubiquitous stressor affecting urban streams, there is a lack of research assessing how urban NPS pollution affects stream ecosystems. We used a natural experimental design approach to assess how stream macroinvertebrate community structure, secondary production and trophic structure are influenced by urban NPS pollution in six streams. 2. Differences in macroinvertebrate community structure and secondary production among sites were highly correlated with stream‐water specific conductivity and dissolved inorganic phosphorus (DIP) concentrations. Macroinvertebrate richness, the Shannon diversity index and the Shannon evenness index were all negatively correlated with specific conductivity. These patterns were driven by differences in the richness and production of EPT and other intolerant taxa. Production of the five most productive taxa, tolerant taxa, non‐insect taxa and primary consumers were all positively correlated with stream‐water DIP. 3. Despite the positive correlation between primary consumer production and DIP, there was no correlation between macroinvertebrate predator production and either total or primary consumer macroinvertebrate production. This was observed because DIP was positively correlated with the production of non‐insect macroinvertebrate taxa assumed to be relatively unavailable for macroinvertebrate predator consumption. After removing production of these taxa, we observed a strong positive correlation between macroinvertebrate predator production and production of available prey. 4. Our results suggest that urban NPS pollution not only affects macroinvertebrate community structure, but also alters secondary production and trophic‐level dynamics. Differences in taxon production in our study indicate the potential for altered energy flow through stream food webs and potential effects on subsidies of aquatic insect prey to riparian food webs.     

崇明东滩鸟类栖息地优化区越冬水鸟的栖息地利用及影响因子

阐明水鸟栖息地利用与环境因子的关系有助于制定针对性的水鸟保护对策。本研究在2012~2013年冬季对崇明东滩鸟类栖息地优化区内越冬水鸟的种类、数量以及6种环境因子(植被面积比例、裸地面积比例、水深、地形变异、栖息地结构多样性和干扰)进行调查,以了解水鸟对人工湿地的栖息地利用及其影响因子。野外调查共记录到水鸟24种9 018只,其中优势种为斑嘴鸭(Anas poecilorhyncha)和绿头鸭(A.platyrhynchos);栖息地优化区内水鸟休息的个体数量占总数量的79.2%,这表明优化区是大多数水鸟的休息地,而小(Tachybaptus ruficollis)、白骨顶(Fulica atra)、黑水鸡(Gallinula chloropus)、白琵鹭(Platalea leucorodia)和黑脸琵鹭(P.minor)的觅食个体数量超过60%,说明优化区也为这些鸟类提供了觅食地。逐步回归分析表明,裸地面积比例是影响越冬水鸟种类分布的最主要因子;尽管游禽在地形变异较大、植被面积比例较低的区域数量较多,但在休息时游禽更偏好于裸地面积比例较高的区域,而涉禽休息时偏好于地形变异较大的区域。为增加栖息地优化区内的水鸟多样性,建议在优化区内种植水鸟可食的沉水植物以增加水鸟的食物资源,同时增加裸地面积比例和地形变异程度,更好地为水鸟提供栖息地。     

AM真菌在植物病虫害生物防治中的作用机制

丛枝菌根(Arbuscular Mycorrhizae,AM)真菌是一类广泛分布于土壤生态系统中的有益微生物,能与大约80%的陆生高等植物形成共生体。由土传病原物侵染引起的土传病害被植物病理学界认定为最难防治的病害之一。研究表明,AM真菌能够拮抗由真菌、线虫、细菌等病原体引起的土传性植物病害,诱导宿主植物增强对病虫害的耐/抗病性。当前,利用AM真菌开展病虫害的生物防治已经引起生态学家和植物病理学家的广泛关注。基于此,围绕AM真菌在植物病虫害生物防治中的最新研究进展,从AM真菌改变植物根系形态结构、调节次生代谢产物的合成、改善植物根际微环境、与病原微生物直接竞争入侵位点和营养分配、诱导植株体内抗病防御体系的形成等角度,探究AM真菌在植物病虫害防治中的作用机理,以期为利用AM真菌开展植物病虫害的生物防治提供理论依据,并对本领域未来的发展方向和应用前景进行展望。     

蒙古栎、白桦根系分解及养分动态

采用埋袋法对蒙古栎(Quercus mongolica)、白桦(Betula platyphylla)两个树种粗根(>10 mm)、中粗根(5—10 mm)、中根(2—5 mm)和细根(<2 mm)的分解速率和养分动态进行研究。结果表明,根系的重量保持率随时间增加呈下降趋势,这种趋势可用Olson指数衰减模型来拟合,即:Xt/X0=e-kt(t为分解时间,X0为根系初始干重,Xt为分解t时间的残留干重,k为年分解系数),通过拟合计算出年分解系数k。在本研究中,蒙古栎粗根、中粗根、中根、细根的年分解系数分别为:0.2928、0.2562、0.2928、0.3660;白桦依次分别为:0.2196、0.3294、0.3660、0.4392,基本呈现随直径增加分解速率减小的趋势。根系分解过程中,两树种各径级均是N浓度增加,可溶性糖浓度减小。在根系分解的不同时期两树种各径级N表现出不同程度的释放或富集,没有明显的规律性;可溶性糖却一直处于释放状态。分解1a时间,蒙古栎各径级根系表现为释放N元素;白桦表现为细根和中根释放N元素,中粗根和粗根富集N元素。蒙古栎、白桦细根和中根可溶性糖的释放率达90%以上,中粗根和粗根的释放率达80%以上。     

施氮对木荷3个种源幼苗根系发育和氮磷效率的影响

以浙北、闽北和赣南3个木荷有代表性的种源作为试验材料,通过人工控制施氮来研究氮沉降对林地贫瘠土壤上木荷幼苗生长和氮磷效率的影响.实验分为4个处理组,分别人工喷施NH4NO3溶液0、50、100和200 kg N hm-2·a-1.结果表明:氮沉降对木荷幼苗生长产生了不同程度的促进作用.木荷幼苗根系干物质重、总长、平均直径、根总表面积和总体积增加了33％-73％,其中＞0.5mm直径的根系生长最为显著,根系呈粗壮舒张型.随氮水平的提高,氮磷吸收效率与根系总长、根系体积、根系平均直径和总表面积相关性增强.在中氮水平下,木荷幼苗根系氮吸收效率受＞0.5mm根长的作用显著,而磷吸收效率与≤0.5mm,0.5-1.0mm和≥1.0mm 3种直径根系根长均显著相关.木荷种源间差异显著,福建建瓯种源根系发达,氮磷的利用效率更高,低氮水平对其根系生长促进作用显著;浙江杭州种源在低氮水平下,地上部分生长促进作用显著,苗高和地径较对照分别增长34％和26％,而根系生长发育迟缓,对氮素响应迟钝;低氮促进江西信丰种源整体增长,但随氮水平提高,地下部生长抑制加强.