稻瘟病菌株的DNA指纹分析及小种鉴别

基于对稻瘟病菌(Pyricularia oryzae)基因文库的分析,我们找到了一套含重复顺序的克隆。其中POR6和POR7被证实具有高度的多态性并随机散布于稻瘟病菌生理小种的致病性时,可以获得可分辨的基因组特异的杂交带型。我们还分析了致病性与8个稻瘟病菌株DNA指纹图谱之间的关系,结果表明各个小种组合间的百分相似率S_xy,值与该小种组合间共同侵染的鉴别品种数目有正相关性。     

Mechanism of adenylate kinase. Are the essential lysines essential?

Using site-specific mutagenesis, we have probed the structural and functional roles of lysine-21 and lysine-27 of adenylate kinase (AK) from chicken muscle expressed in Escherichia coli. The two residues were chosen since according to the nuclear magnetic resonance (NMR) model [Mildvan, A. S., & Fry, D. C. (1987) Adv. Enzymol. 58, 241-313], they are located near the alpha- and the gamma-phosphates, respectively, of adenosine 5'-triphosphate (ATP) in the AK-MgATP complex. In addition, a lysine residue (Lys-21 in the case of AK) along with a glycine-rich loop is considered "essential" in the catalysis of kinases and other nucleotide binding proteins. The Lys-27 to methionine (K27M) mutant showed only slight increases in kcat and Km, but a substantial increase (1.8 kcal/mol) in the free energy of unfolding, relative to the WT AK. For proper interpretation of the steady-state kinetic data, viscosity-dependent kinetics was used to show that the chemical step is partially rate-limiting in the catalysis of AK. Computer modeling suggested that the folded form of K27M could gain stability (relative to the wild type) via hydrophobic interactions of Met-27 with Val-179 and Phe-183 and/or formation of a charge-transfer complex between Met-27 and Phe-183. The latter was supported by an upfield shift of the methyl protons of Met-27 in 1H NMR. Other than this, the 1H NMR spectrum of K27M is very similar to that of WT, suggesting little perturbation in the global or even local conformations.(ABSTRACT TRUNCATED AT 250 WORDS)     

Enthalpic and entropic contributions to actin stability: calorimetry, circular dichroism, and fluorescence study and effects of calcium

The delta H associated with the thermal unfolding of G-actin has been determined by differential scanning calorimetry (DSC) to be 142 +/- 5 kcal/mol, with the Tm (melting temperature) at 57.2 +/- 0.5 degrees C, at pH 8.0 (heating rate 0.5 K/min). The transition is broad and cannot be treated as a single transition that mimics a two-state process, suggesting the existence of domains. Deconvolution is done to fit it into two quasi-independent two-state transitions. For F-actin, the transition is more cooperative, with a cooperative ratio (the ratio of van't Hoff enthalpy and calorimetric enthalpy) of 1.4, indicating intermonomer interaction. The delta H of the thermal unfolding of F-actin is 162 +/- 10 kcal/mol with a Tm at 67.0 +/- 0.5 degrees C. A state of G-actin similar to that of the heat-denatured form, designated D-actin, is obtained by removing tightly bound Ca2+ with EGTA. The DSC-detectable cooperative transition is completely lost when the free calcium concentration of the medium is 1 x 10(-11) M or lower, using a Ca2+/EGTA buffer system. However, circular dichroism (CD) shows that the helix content of actin, 32% in the G-form, is only partially reduced to 19% in this apo form. The CD spectrum and the helix content of the calcium-depleted actin are almost identical with those of the heat-denatured D form. This loss of 40% of the native helical content is irreversible in both cases. The remaining 60% of the native helical content cannot be further eliminated by heating to 95 degrees C.(ABSTRACT TRUNCATED AT 250 WORDS)     

JQ-1 ameliorates schistosomiasis liver granuloma in mice by suppressing male and female reproductive systems and egg development of Schistosoma japonicum

Schistosomiasis is a serious and widespread parasitic disease caused by infection with Schistosoma. Because the parasite’s eggs are primarily responsible for schistosomiasis dissemination and pathogenesis, inhibiting egg production is a potential approach to control the spread and severity of the disease. The bromodomain and extra-terminal (BET) proteins represent promising targets for the development of epigenetic drugs against Schistosoma. JQ-1 is a selective inhibitor of the BET protein family. In the present study, JQ-1 was applied to S. japonicum in vitro. By using laser confocal scanning microscopy and EdU incorporation assays, we showed that application of JQ-1 to worms in vitro affected egg laying and the development of both the male and female reproductive systems. JQ-1 also inhibited the expression of the reproductive-related genes SjPlk1 and SjNanos1 in S. japonicum. Mice infected with S. japonicum were treated with JQ-1 during egg granuloma formation. JQ-1 treatment significantly reduced the size of the liver granulomas and levels of serum alanine aminotransferase and aspartate aminotransferase in mice and suppressed both egg laying and the development of male and female S. japonicum reproductive systems in vivo. Moreover, the mRNA expression levels of some proinflammatory cytokines were decreased in the parasites. Our findings suggest that JQ-1 treatment attenuates S. japonicum egg–induced hepatic granuloma due at least in part to suppressing the development of the reproductive system and egg production of S. japonicum. These findings further suggest that JQ-1 or other BET inhibitors warrant additional study as a new approach for the treatment or prevention of schistosomiasis.     

用EDTA法研究镰刀菌胞内、胞外Pb2+的分布特征

【目的】建立一种方便、快捷、相对准确、能够定量地测定镰刀菌细胞内、外Pb2+分布的技术手段。【方法】用EDTA溶液浸泡镰刀菌细胞,使其胞外(表面)Pb2+被螯合、洗脱并测定,之后将被浸泡、清洗过的细胞消解、测铅。【结果】EDTA可以将镰刀菌表面的Pb2+螯合,且在99 min内不损伤镰刀菌细胞;以EDTA为反应介质和滴定剂,XO为指示剂,测定镰刀菌胞内、胞外Pb2+分布是可行的。依据此实验方法,测定了镰刀菌在Pb2+浓度为500 mg/L的培养基中的生长曲线、培养基中Pb2+浓度和细胞内、外Pb2+的含量。【结论】镰刀菌固定Pb2+的过程是先将Pb2+吸附在菌体胞外,之后转运至细胞内部,菌体胞外Pb2+的容纳量是有限的,每克菌体胞外Pb2+饱和吸附量约1.37 mg,通过计算可得,每克菌体用于吸附Pb2+的胞外活性位点约3.97×1018个。     

樟绒枝霉(Malbranchea cinnamomea)固体发酵产木聚糖酶的发酵条件优化

[目的] 研究樟绒枝霉(Malbranchea cinnamomea) CAU521利用农业废弃物固体发酵产木聚糖酶的发酵条件.[方法]采用单因素试验法优化影响菌株产酶的各个条件,包括碳源种类、氮源种类、初始pH、初始水分含量、培养温度及发酵时间共6个因素.[结果]获得的最佳产酶条件为:稻草为发酵碳源、2％(W/W)的酵母提取物为氮源、初始pH 7.0、初始水分含量80％和发酵温度45℃.在此条件下发酵6d后木聚糖酶的酶活力达到13 120 U/g干基碳源.[结论]樟绒枝霉固体发酵产木聚糖酶的产酶水平高,生产成本低,具有潜在的工业化应用前景.     

近30年来青藏高原高寒草地NDVI动态变化对自然及人为因子的响应

草地生态系统是陆地生态系统的重要组成部分,在调节气候、水土保持、防风固沙、保护生物多样性等方面发挥着重要作用。青藏高原是全球海拔最高的独特地域单元,平均海拔超过4000 m,素有“世界第三极”之称,亦是我国重要的生态安全屏障,其对气候变化敏感且易受人类活动的影响,属于气候变化敏感区和生态脆弱带。近年来,由于气候变化和人类活动的不断加剧,青藏高原区域气候和环境发生了重大变化,气候变暖、水污染、草地退化和沙化等问题已严重阻碍了当地社会经济的可持续发展。高寒草地是青藏高原主要的植被类型,在气候变化和人类活动加剧的背景下,青藏高原高寒草地植被的动态变化受到人们的广泛关注。归一化植被指数（Normalized difference vegetation index, NDVI）因能有效地反映植被覆盖程度和生长状况而被广泛应用于植被动态的研究中。气温与降水被认为是影响青藏高原植被动态的主要气候因子,放牧强度与人口数量则是主要人为因子。因此,研究高寒草地植被对气候变化和人类活动的响应机制对预测未来草地变化有着重要的意义。基于青藏高原生长季草地的NDVI、气温、降水、放牧强度及人口数量等数据,在县区尺度上,采用趋势分析法探究了1982—2013年青藏高原143个县区生长季草地NDVI动态变化、气候变化及人类活动的变化,同时采用面板数据模型分析了32年来青藏高原143个县区气候、人为因子变化对草地NDVI变化的相对贡献。研究结果显示：（1）青藏高原高寒草地生长季NDVI总体呈增长趋势,草地植被生长状态呈现“整体改善、局部退化”趋势;（2）青藏高原生长季平均气温与降水量整体增加,气候呈现“暖湿化”趋势;（3）在长时间尺度上,气候因子主导了青藏高原高寒草地NDVI的变化,降雨和气温的增加促进草地NDVI的增加,放牧强度的持续增加则导致草地NDVI的减少。     

补料工艺对两株法夫酵母菌株产虾青素的影响

【目的】考察不同补料工艺对法夫酵母菌株生长和虾青素合成的影响。【方法】对法夫酵母JMU-VDL668和JMU-MVP14菌株在7 L罐中进行分批及分批补料培养; 同时, 测定发酵过程中生物量、虾青素和葡萄糖含量的变化。【结果】采用恒DO补料, 法夫酵母JMU-VDL668菌株获得的生物量最大(64.6 g/L), 是分批培养的2.2倍; 采用恒pH补料发酵, 虾青素的产量最高(20.6 mg/L), 是分批培养的1.5倍。与JMU-VDL668菌株不同, 虾青素高产菌株JMU-MVP14菌株采用恒pH补料, 获得生物量最大(48.5 g/L), 但虾青素产量大大降低(仅17.5 mg/L); 采用脉冲补料, 虾青素产量最高, 达到414.1 mg/L, 与分批发酵相比提高了200.2%; 采用恒DO补料, 生物量(38.5 g/L)和虾青素产量(403.2?mg/L)增加显著, 与分批发酵相比分别提高了133.1%和192.3%。【结论】不同补料工艺对法夫酵母菌株生产虾青素影响很大。其中, 采用恒pH补料工艺, 法夫酵母JMU-VDL668菌株可以获得最高的虾青素产量, 而采用脉冲补料工艺, 最适于法夫酵母JMU-MVP14菌株发酵生产虾青素。     

鄂尔多斯市生态资产和生态系统生产总值评估

鄂尔多斯市属于生态环境脆弱区域,在大规模开发丰富能源资源的同时,生态环境保护也在不断加强,评估鄂尔多斯生态资产价值,是认识鄂尔多斯生态价值的关键。构建了生态资产、生态系统生产总值评估的理论框架和评估方法指标体系,基于鄂尔多斯市生态系统格局、质量数据,评估了鄂尔多斯市生态资产、生态系统生产总值。评估结果表明:(1)2015年,鄂尔多斯市生态系统质量等级以差、低、中为主,分别占比:50.74%、31.78%、6.17%,差、低、中等级的生态系统面积之和占比88.69%。(2)2015年,鄂尔多斯市生态资产指数为1998.19,其中生态资产指数最高的是鄂托克旗,生态资产指数为392.26,占比19.63%,其次是杭锦旗,生态资产指数为307.48,占比15.39%。2010—2015年,鄂尔多斯市生态资产指数总体呈上升趋势。其中,上升最为剧烈的区域是鄂托克前旗,生态资产指数上升92.72,占比19.38%,其次为乌审旗,生态资产指数上升91.04,占比19.03%。(3)2015年,鄂尔多斯市生态系统生产总值(GEP)为2481.71亿元,GEP约为2015年GDP总值的58.72%,鄂尔多斯市单位面积GEP为0.03亿元/km~2,人均GEP为12.14万元/人。2010—2015年,鄂尔多斯市生态系统生产总值从1975.50亿元增加至2481.71亿元,增加量占2010年GEP价值的比例为25.62%,上升趋势明显。(4)2010—2015年,鄂尔多斯市生态系统质量变化原因主要是GDP增长(P0.05),表明经济持续发展降低了当地人口对草地、森林的经济的依赖性。鄂尔多斯市生态资产指数上升的主要驱动因素气候因素降水的增加(P0.001)、人口密度的下降(P0.01),以及GDP的增加(P0.01)。鄂尔多斯间生态系统生产总值变化的主要驱动因素,包括城市扩张、农田开垦、退耕还林、草、湿、生态恢复、矿山开采、生态退化等。本研究根据鄂尔多斯市生态系统质量、生态资产、生态系统生产总值面临的问题,提出了生态保护建议与对策。     

高致病性2型猪链球菌plcR基因敲除株的构建及其相关生物学特性的研究

【目的】构建高致病性2型猪链球菌05ZYH33菌株plcR基因敲除株,通过比较突变株与野生株生物学特性的差异,研究plcR基因在2型猪链球菌致病过程中的作用。【方法】利用同源重组技术敲除plcR基因,多重交叉PCR及RT-PCR鉴定并测序验证。比较野生株与突变株基本生物学特性的差异,小鼠攻毒实验分析plcR基因缺失对细菌毒力的影响。【结果】经RT-PCR证实05SSU0241与05SSU0242共转录,通过多重交叉PCR及RT-PCR证实成功构建plcR基因缺失突变株,基本生物学特性显示突变株的生长速率、菌落形态、溶血活性均无显著改变,小鼠致病性试验结果显示,野生株攻毒的小鼠死亡率为70%,突变株攻毒的小鼠死亡率为40%,毒力较野生株显著降低。【结论】plcR基因作为2型猪链球菌有毒株基因组中特有的外源基因,在细菌致病过程中具有重要作用。