Crystal structure of a beta-catenin/Tcf complex

The Wnt signaling pathway plays critical roles in embryonic development and tumorigenesis. Stimulation of the Wnt pathway results in the accumulation of a nuclear beta-catenin/Tcf complex, activating Wnt target genes. A crystal structure of beta-catenin bound to the beta-catenin binding domain of Tcf3 (Tcf3-CBD) has been determined. The Tcf3-CBD forms an elongated structure with three binding modules that runs antiparallel to beta-catenin along the positively charged groove formed by the armadillo repeats. Structure-based mutagenesis defines three sites in beta-catenin that are critical for binding the Tcf3-CBD and are differentially involved in binding APC, cadherin, and Axin. The structural and mutagenesis data reveal a potential target for molecular drug design studies.     

九龙江河口浮游植物的时空变动及主要影响因素

于2009年春（5月）、夏（8月）、秋（11月）在九龙江河口水域进行了水文、化学和生物的生态完全示范区综合外业调查,研究了九龙江河口浮游植物的种类组成、密度分布、季节变化、空间差异及主要影响因素,并结合前期资料分析了年际变动。结果表明,九龙江河口的浮游植物共记录7个门类75属134种。主体是硅藻,绿藻次之,甲藻和蓝藻较少,黄藻检出率高,裸藻和金藻零星检出。种类组成的空间差异大,绿藻在河口内区淡水水域比硅藻更占优势, 中肋骨条藻（Skeletonema costatum）、短角弯角藻（Eucampia zodiacus）、圆筛藻（Coscinodiscus spp.）、颗粒直链藻（Melosira granulata）、微小小环藻（Cyclotella. caspia）是河口区咸淡水水域及近海区的主要种类。浮球藻（Planktosphneria gelotinosa）、栅藻（Scenedesmus spp.）、盘星藻（Pediastrim spp.）、小席藻（Phormidium tenus）是河口内区淡水水域的主要种类。根据浮游植物的生态类型及其生境特征大致可分为三大类群。浮游植物密度夏季最高,平均为358.68103cells/L,密集中心的季节变化明显,密度分布由优势类群的密度分布决定。中肋骨条藻和短角弯角藻的数量庞大,导致优势种突出,多样性降低,种间分布不均匀,群落结构简单化。与史料比对,种类组成因淡水藻类的列入而更丰富,密度年际降低,中肋骨条藻仍是第一优势种,但优势度有较大降幅,优势类群有重大年际变化,细胞个体较小的种类占优。盐度和营养盐对浮游植物的分布及密度变化造成极大的时空差异,存在线性、复合线性、多项回归等复杂的相关关系。     

Application of radiation hybrid in gene mapping

Ｒａｄｉａｔｉｏｎｈｙｂｒｉｄ(ＲＨ)ｍａｐｐｉｎｇｉｓａｓｏｍａｔｉｃｃｅｌｌｇｅｎｅｔｉｃｍａｐｐｉｎｇｔｅｃｈｎｉｑｕｅｗｉｔｈａｒｅｓｏｌｕｔｉｏｎｏｆａｂｏｕｔ500ｋｂ.Ｉｔｈａｓｂｅｃｏｍｅａｇｅｎｅｒａｌｗａｙｔｏｃｏｎｓｔｒｕｃｔｈｉｇｈｒｅｓｏｌｕｔｉｏｎ,ｃｏｎｔｉｇｕｏｕｓｐｈｙｓｉｃａｌｍａｐｏｆｈｕｍａｎｃｈｒｏｍｏｓｏｍｅｓ[1].ＢａｓｅｄｏｎｅａｒｌｉｅｒｓｔｕｄｉｅｓｏｆＧｏｓｓａｎｄＨａｒｒｉｓ[2]ａｎｄｍｏｄｉｆｉｃａｔｉｏｎｌａｔｅｒｂｙＣｏｘａｎｄｃｏｗｏｒｋｅｒ…     

瘤胃降解粗纤维产甲烷的厌氧真菌与甲烷菌共培养物的分离鉴定

【目的】本试验从瘤胃中分离鉴定降解粗纤维产甲烷的厌氧真菌与甲烷菌共培养物,为深入探究甲烷菌对厌氧真菌代谢途径的影响及相关调节机制奠定基础。【方法】利用厌氧滚管技术从荷斯坦奶牛瘤胃内容物中分离厌氧真菌与甲烷菌共培养物,通过形态学观察和DAPI染色以及甲烷菌16S rRNA基因序列分析方法分别对厌氧真菌及甲烷菌进行鉴定。【结果】从荷斯坦奶牛瘤胃中共分离到28株厌氧真菌与甲烷菌共培养物。共培养物中的厌氧真菌均为单中心菌株,分别属于Piromyces,Neocallimastix和Caeomyces属,所占百分比为53.57%,42.86%及3.57%。甲烷菌16S rRNA基因序列分析结果表明,共培养物中的甲烷菌均为甲烷短杆菌。本研究共获得四种不同的厌氧真菌与甲烷菌组合,分别为Piromyces/类Methanobrevibacter olleyae菌株,Neocallimastix/类Methanobrevibacter olleyae菌株,Neocallimastix/类Methanobrevibacter thaueri菌株及Caecomyces/类Methanobrevibacter olleyae菌株,分别占总数的53.57%,39.29%,3.57%及3.57%。【结论】分离得到的28株厌氧真菌和甲烷菌共培养物中,占优势的为具有丰富丝状假根的厌氧真菌Piromyces和Neocallimastix以及类Methanobrevibacter olleyae属的甲烷短杆菌。本研究为进一步研究瘤胃内厌氧真菌与甲烷菌相互代谢关系奠定基础。     

杂交水稻及其“三系”线粒体DNA的AP—PCR指纹图谱

为了研究水稻（Ｏｒｙｚａ ｓａｔｉｖａ Ｌ．）细胞质雄性不育（ＣＭＳ）与线粒体基因组的关系,应用ＡＰ－ＰＣＲ 分析,用７ 个任意单引物对６ 种水稻品系线粒体ＤＮＡ 进行了扩增。水稻线粒体ＤＮＡ 的ＡＰ－ＰＣＲ 产物可分为三种类型：（１）所有供试品系均能扩增的片段,它们代表了线粒体ＤＮＡ 在进化上的保守性序列。有４ 个引物检测到这类片段。（２）２ 个以上水稻品系共同出现而在全部供试材料间存在差异的扩增片段,这类片段是检测水稻线粒体ＤＮＡ多态性的主要来源。（３）一种细胞质类型所特有的扩增片段,从引物Ｒ２ 和Ｖ５ 的扩增产物中发现了这类片段,它们可能与ＣＭＳ有关联。另外,ＷＡ型不育系珍汕９７Ａ 与其杂种之间在６ 个引物的扩增图谱上均存在不同程度的差异,说明两者的线粒体ＤＮＡ序列结构可能存在某种差别     

Surface Display of Human Serum Albumin on Bacillus subtilis Spores for Oral Administration

Human serum albumin (HSA) is the major protein component of human plasma. To date, HSA for clinical uses is mostly produced by fractionation of human whole blood, which is accompanied by a lot of limitations. To obtain long-term bioactive albumin, we used hsa as a foreign gene and constructed a recombinant plasmid pJS700-HSA which carries a recombinant gene cotC-hsa under the control of cotC promoter. Plasmid pJS700-HSA was transformed into Bacillus subtilis by double cross-over and an amylase inactivated mutant was produced. After induction of spore formation, western blot and fluorescence immunoassay were used to monitor HSA surface expression on spores. We estimated that HSA displayed on the spore accounted for 0.135 % of the total spore proteins and about 0.023 fg HSA were exposed on the surface of each spore. Oral administration to mice with spores displaying HSA implied that the recombinant spores may have potential ability to increase the serum albumin level in vivo due to the resistant characters of spores.     

hnRNP C and polypyrimidine tract-binding protein specifically interact with the pyrimidine-rich region within the 3'NTR of the HCV RNA genome

Like other members of the Flaviviridae family, the 3' non-translated region (NTR) of the hepatitis C virus (HCV) is believed to function in the initiation and regulation of viral RNA replication by interacting with components of the viral replicase complex. To inves-tigate the possibility that host components may also participate in this process, we used UV cross-linking assays to determine if any cellular proteins could bind specifically to the 3'NTR RNA. We demonstrate the specific interaction of two host proteins with the extensive pyrimidine-rich region within the HCV 3'NTR. One host protein migrates as a doublet with a molecular weight of 57 kDa and is immunoreactive with antisera specific for polypyrimidine tract-binding protein (PTB), and the other protein (35 kDa) is recognized by a monoclonal antibody specific for heterogeneous nuclear ribonucleoprotein C (hnRNP C). These results suggest that recognition of the large pyrimidine-rich region by PTB and hnRNP C may play a role in the initiation and/or regulation of HCV RNA replication.     

Isolation and Characterization of Antifungal Substances from Burkholderia sp. Culture Broth

A new antagonistic Burkholderia strain, designated MP-1 and producing antifungal activities against various filamentous plant pathogenic fungi, was isolated from the rhizoshere in the Naju area. Cultural characteristic studies strongly suggested that this strain belongs to the genus Burkholderia. The nucleotide sequence of the 16S rRNA gene (1491 pb) of strain MP-1 exhibited close similarity (99% to 100%) with other Burkholderia 16S rRNA genes. Extraction of fermentation broth of Burkholderia sp. MP-1 and various separations and purification steps led to isolation of four pure active molecules. The chemical structure of these four compounds—named phenylacetic acid, hydrocinnamic acid, 4-hydroxyphenylacetic acid, and 4-hydroxyphenylacetate methyl ester—was established on the basis on their gas chromatography–electron impact–mass spectrometry (GC-EI-MS) and trimethylsilation GC-EI-MS data. The four isolated compounds inhibited filamentous fungal growth on potato dextrose agar medium supplemented with 100 mg/L of phenylacetic acid, hydrocinnamic acid, 4-hydroxyphenylacetic acid and 4-hydroxyphenylacetate methyl ester individually.