The impact of sarcoptic mange Sarcoptes scabiei on the British fox Vulpes vulpes population

• 1 Disease epizootics can significantly influence host population dynamics and the structure and functioning of ecological communities. Sarcoptic mange Sarcoptes scabiei has dramatically reduced red fox populations Vulpes vulpes in several countries, including Britain, although impacts on demographic processes are poorly understood. We review the literature on the impact of mange on red fox populations, assess its current distribution in Britain through a questionnaire survey and present new data on resultant demographic changes in foxes in Bristol, UK.
• 2 A mange epizootic in Sweden spread across the entire country in < 10 years resulting in a decline in fox density of up to 95%; density remained lowered for 15–20 years. In Spain, mange has been enzootic for > 75 years and is widely distributed; mange presence was negatively correlated with habitat quality.
• 3 Localized outbreaks have occurred sporadically in Britain during the last 100 years. The most recent large‐scale outbreak arose in the 1990s, although mange has been present in south London and surrounding environs since the 1940s. The questionnaire survey indicated that mange was broadly distributed across Britain, but areas of perceived high prevalence (> 50% affected) were mainly in central and southern England. Habitat type did not significantly affect the presence/absence of mange or perceived prevalence rates. Subjective assessments suggested that populations take 15–20 years to recover.
• 4 Mange appeared in Bristol's foxes in 1994. During the epizootic phase (1994–95), mange spread through the city at a rate of 0.6–0.9 km/month, with a rise in infection in domestic dogs Canis familiaris c. 1–2 months later. Juvenile and adult fox mortality increased and the proportion of females that reproduced declined but litter size was unaffected. Population density declined by > 95%.
• 5 In the enzootic phase (1996–present), mange was the most significant mortality factor. Juvenile mortality was significantly higher than in the pre‐mange period, and the number of juveniles classified as dispersers declined. Mange infection reduced the reproductive potential of males and females: females with advanced mange did not breed; severely infected males failed to undergo spermatogenesis. In 2004, Bristol fox population density was only 15% of that in 1994.

     

Admixture facilitates adaptation from standing variation in the European aspen (Populus tremula L.), a widespread forest tree

Adaptation to new environments can start from new mutations or from standing variation already present in natural populations. Whether admixture constrains or facilitates adaptation from standing variation is largely unknown, especially in ecological keystone or foundation species. We examined patterns of neutral and adaptive population divergence in Populus tremula L., a widespread forest tree, using mapped molecular genetic markers. We detected the genetic signature of postglacial admixture between a Western and an Eastern lineage of P. tremula in Scandinavia, an area suspected to represent a zone of postglacial contact for many species of animals and plants. Stringent divergence‐based neutrality tests provided clear indications for locally varying selection at the European scale. Six of 12 polymorphisms under selection were located less than 1 kb away from the nearest gene predicted by the Populus trichocarpa genome sequence. Few of these loci exhibited a signature of ‘selective sweeps’ in diversity‐based tests, which is to be expected if adaptation occurs primarily from standing variation. In Scandinavia, admixture explained genomic patterns of ancestry and the nature of clinal variation and strength of selection for bud set, a phenological trait of great adaptive significance in temperate trees, measured in a common garden trial. Our data provide a hitherto missing direct link between past range shifts because of climatic oscillations, and levels of standing variation currently available for selection and adaptation in a terrestrial foundation species.     

Phylogeny,classification and evolution of the water scavenger beetle tribe Hydrobiusini inferred from morphology and molecules (Coleoptera: Hydrophilidae: Hydrophilinae)

The water scavenger beetle tribe Hydrobiusini contains 47 species in eight genera distributed worldwide. Most species of the tribe are aquatic, although several species are known to occur in waterfalls or tree mosses. Some members of the tribe are known to communicate via underwater stridulation. While recent morphological and molecular‐based phylogenies have affirmed the monophyly of the tribe as currently circumscribed, doubts remain about the monophyly of included genera. Here we use morphological and molecular data to infer a species‐level phylogeny of the Hydrobiusini. The monophyly of the tribe is decisively supported, as is the monophyly of most genera. The genus Hydrobius was found to be polyphyletic, and as a result the genus Limnohydrobius stat. rev. is removed from synonymy with Hydrobius, yielding three new combinations: L. melaenus comb.n. , L. orientalis comb.n. , and L. tumbius comb.n. Recent changes to the species‐level taxonomy of Hydrobius are reviewed. The morphology of the stridulatory apparatus has undergone a single remarkable transformation within the lineage, from a simple, unmodified pars stridens to one that is highly organized and complex. We present an updated key to genera, revised generic diagnoses and a list of the known distributions for all species within the tribe.     

Degeneration of biogenic superparamagnetic magnetite

Magnetite crystals precipitated as a consequence of Fe(III) reduction by Shewanella algae BrY after 265 h incubation and 5-year anaerobic storage were investigated with transmission electron microscopy, Mössbauer spectroscopy and X-ray diffraction. The magnetite crystals were typically superparamagnetic with an approximate size of 13 nm. The lattice constants of the 265 h and 5-year crystals are 8.4164Å and 8.3774Å, respectively. The Mössbauer spectra indicated that the 265 h magnetite had excess Fe(II) in its crystal-chemistry (Fe³⁺_1.990Fe²⁺_1.015O₄) but the 5-year magnetite was Fe(II)-deficient in stoichiometry (Fe³⁺_2.388Fe²⁺_0.419O₄). Such crystal-chemical changes may be indicative of the degeneration of superparamagnetic magnetite through the aqueous oxidization of Fe(II) anaerobically, and the concomitant oxidation of the organic phases (fatty acid methyl esters) that were present during the initial formation of the magnetite. The observation of a corona structure on the aged magnetite corroborates the anaerobic oxidation of Fe(II) on the outer layers of magnetite crystals. These results suggest that there may be a possible link between the enzymatic activity of the bacteria and the stability of Fe(II)-excess magnetite, which may help explain why stable nano-magnetite grains are seldom preserved in natural environments.     

Densities of polychaetes in habitat fragments depend on the surrounding matrix but not the complexity of the remaining fragment

Biogenically engineered habitats are constantly changing in space and time, resulting in changes to the landscape and the ecology of associated taxa. Using patchily distributed biogenic habitats on intertidal rocky shores the influences of different aspects of the landscape were investigated, that is, the surrounding matrix and the habitat itself. Experiments to test the effect of the matrix were carried out by transplanting assemblages in artificial habitats from one type of biogenically engineered matrix (created by the tubeworm Galeolaria caespitosa) to another (created by the oyster Saccostrea glomerata). Change to the surrounding matrix resulted in the densities of polychaete worms in central fragments of habitat changing to become more similar to their new surroundings. To test how the habitat influenced predator–prey interactions, polychaetes were transplanted from a complex habitat (created by the turfing alga Corallina officinalis) to less complex habitat (created by the tubeworm G. caespitosa), with or without the presence of the predatory polychaete, Perinereis amblyodonta. This experiment also tested the influence of habitat replacement on densities of polychaetes, regardless of any new interactions between species. Despite coralline turf being a much more complex habitat than Galeolaria, P. amblyodonta successfully preyed on other species of polychaetes in both habitats. Furthermore, in the absence of P. amblyodonta, survival of polychaetes did not differ between the habitats. These types of experiments will be useful for testing similar hypotheses in different landscapes and will assist in gaining a more general understanding of habitat modification.     

Habitat Use of American Alligators in East Texas

ABSTRACT The American alligator (Alligator mississippiensis) has made a remarkable recovery throughout its range during the last half-century. In Texas, USA, current inland alligator population and harvest management strategies rely on generalized and often site-specific habitat and population data generated from coastal populations, because it is assumed that habitat and demographic similarities exist between inland and coastal populations. These assumptions have not been verified, however, and no studies have specifically examined inland alligator habitat use in Texas. We quantified alligator habitat use in East Texas during 2003–2004 to address this information gap and to facilitate development of regionally specific management strategies. Although habitat was variable among study areas, alligators used habitats with >50% open water, substantial floating vegetation, and emergent vegetation close (<12 m) to dry ground and cover. Adults used habitats further from dry ground and cover, in open water (75–85%), with less floating vegetation (6–22%) than did subadults, which used habitats that were closer to dry ground and cover, with less open water (52–68%), and more floating vegetation (8–40%). Although habitat use mirrored coastal patterns, we estimated alligator densities to be 3–5 times lower than reported in coastal Texas, likely a result of inland habitat deviations from optimal coastal alligator habitat, particularly in the preponderance of open water and floating vegetation. Our findings that 1) inland habitats varied among sites and did not exactly match assumed optimal coastal habitats, 2) alligators used these inland habitats slightly differently than coastal areas, and 3) inland alligator densities were lower than coastal populations, all highlight the need for regionally specific management approaches. Because alligator populations are influenced by habitat quality and availability, any deviations from assumed optimal habitat may magnify harvest impacts upon inland populations.     

Demography and Genetic Structure of a Recovering Grizzly Bear Population

ABSTRACT Grizzly bears (brown bears; Ursus arctos) are imperiled in the southern extent of their range worldwide. The threatened population in northwestern Montana, USA, has been managed for recovery since 1975; yet, no rigorous data were available to monitor program success. We used data from a large noninvasive genetic sampling effort conducted in 2004 and 33 years of physical captures to assess abundance, distribution, and genetic health of this population. We combined data from our 3 sampling methods (hair trap, bear rub, and physical capture) to construct individual bear encounter histories for use in Huggins—Pledger closed mark—recapture models. Our population estimate, Ň = 765 (95% CI = 715–831) was more than double the existing estimate derived from sightings of females with young. Based on our results, the estimated known, human-caused mortality rate in 2004 was 4.6% (95% CI = 4.2–4.9%), slightly above the 4% considered sustainable; however, the high proportion of female mortalities raises concern. We used location data from telemetry, confirmed sightings, and genetic sampling to estimate occupied habitat. We found that grizzly bears occupied 33,480 km² in the Northern Continental Divide Ecosystem (NCDE) during 1994–2007, including 10,340 km² beyond the Recovery Zone. We used factorial correspondence analysis to identify potential barriers to gene flow within this population. Our results suggested that genetic interchange recently increased in areas with low gene flow in the past; however, we also detected evidence of incipient fragmentation across the major transportation corridor in this ecosystem. Our results suggest that the NCDE population is faring better than previously thought, and they highlight the need for a more rigorous monitoring program.     

An Evolutionary Perspective for Bimodal Respiration: A Biological Synthesis of Fish Air Breathing

SYNOPSIS: The broad phyletic distribution of bimodal breathingamong the fishes, the diversity of this group's aerial-respiratoryspecializations, and the numerous ways that bimodality has permeatedthe natural history of many species provide a broad perspectiveon the evolution and biological significance of bimodal breathing.The long term evolutionary view of bimodal breathing emphasizesits importance in the evolutionary transition to terrestriality;a key role in this process was played by the fishes which werethe first air-breathing vertebrates. On the other hand, in mostextant fishes bimodality has not led to terrestriality. Rather,auxiliary air breathing enables a species to remain in or toexploit an aquatic habitat from which it would otherwise beexcluded.