Etude au Microscope Electronique du CiliéPseudomicrothorax dubius Maupas

SYNOPSIS. Ciliates of the genus Pseudomicrothorax present, at the ultrastructural level, some remarkable peculiarities from the points of view of both cytology and taxonomy. The trichocysts have 4 apical blades which are characteristic of the family Microthoracidae; the curious subcuticular membrane is found in the Microthoracidae and, admittedly less typically, in the Nassulidae; the cytopharyngeal armature is exactly comparable to that of the Nassulidae. These facts, like those of Thompson and Corliss on the organization of the oral ciliates, show—as suggested by Corliss–that the taxonomic position of the genus Pseudomicrothorax throws light on certain stages of the evolution of the Ciliata.     

Phylogeography of two cryptic species of African desert jerboas (Dipodidae: Jaculus)

The lesser Egyptian jerboa Jaculus jaculus is a desert dwelling rodent that inhabits a broad Arabian–Saharan arid zone. Recently, two distant sympatric lineages were described in North‐West Africa, based on morphometric and molecular data, which may correspond to two cryptic species. In the current study, phylogenetic relationships and phylogeographical structure among those lineages and geographical populations from North Africa and the Middle East were investigated. The phylogeographical patterns and genetic diversity of the cytochrome b gene (1110 bp) were addressed on 111 jerboas from 41 localities. We found that the variation in Africa is partitioned into two divergent mitochondrial clades (10.5% divergence relating to 1.65–4.92 Mya) that corresponds to the two cryptic species: J. jaculus and J. deserti. Diversifications within those cryptic species/clades were dated to 0.23–1.13 Mya, suggesting that the Middle Pleistocene climatic change and its environmental consequences affected the evolutionary history of African jerboas. The third distant clade detected, found in the Middle East region, most likely represents a distinct evolutionary unit, independent of the two African lineages. © 2012 The Linnean Society of London, Biological Journal of the Linnean Society, 2012, ??, ??–??.     

A land snail's view of a fragmented landscape

Habitat fragmentation may influence the genetic structure of populations, especially of species with low mobility. So far, these effects have been mainly studied by surveying neutral markers, and much less by looking at ecologically relevant characters. Therefore, we aimed to explore eventual patterns of covariation between population structuring in neutral markers and variation in shell morphometrics in the forest‐associated snail Discus rotundatus in relation to habitat fragment characteristics. To this end, we screened shell morphometric variability and sequence variation in a fragment of the mitochondrial 16S rDNA gene in D. rotundatus from the fragmented landscape of the Lower Rhine Embayment, Germany. The 16S rDNA of D. rotundatus was highly variable, with a total of 118 haplotypes (384 individuals) forming four clades and one unresolved group. There was a geographic pattern in the distribution of the clades with the river Rhine apparently separating two groups. Yet, at the geographic scale considered, there was no obvious effect of fragmentation on shell morphometrics and 16S rDNA variation because G_ST often was as high within, as between forests. Instead, the age of the habitat and (re‐)afforestation events appeared to affect shell shape and 16S rDNA in terms of the number of clades per site. The ecologically relevant characters thus supported the presumably neutral mitochondrial DNA markers by indicating that populations of not strictly stenecious species may be (relatively) stable in fragments. However, afforestation after large clearcuts and habitat gain after the amendment of deforestation are accompanied by several, seemingly persistent peculiarities, such as altered genetic composition and shell characters (e.g. aperture size). © 2009 The Linnean Society of London, Biological Journal of the Linnean Society, 2009, 98 , 839–850.     

Forest refugia revisited: nSSRs and cpDNA sequences support historical isolation in a wide‐spread African tree with high colonization capacity,Milicia excelsa (Moraceae)

The impact of the Pleistocene climate oscillations on the structure of biodiversity in tropical regions remains poorly understood. In this study, the forest refuge theory is examined at the molecular level in Milicia excelsa, a dioecious tree with a continuous range throughout tropical Africa. Eight nuclear microsatellites (nSSRs) and two sequences and one microsatellite from chloroplast DNA (cpDNA) showed a deep divide between samples from Benin and those from Lower Guinea. This suggests that these populations were isolated in separate geographical regions, probably for several glacial cycles of the Pleistocene, and that the nuclear gene pools were not homogenized despite M. excelsa’s wind‐pollination syndrome. The divide could also be related to seed dispersal patterns, which should be largely determined by the migration behaviour of M. excelsa’s main seed disperser, the frugivorous bat Eidolon helvum. Within Lower Guinea, a north–south divide, observed with both marker types despite weak genetic structure (nSSRs: F_ST = 0.035, cpDNA: G_ST = 0.506), suggested the existence of separate Pleistocene refugia in Cameroon and the Gabon/Congo region. We inferred a pollen‐to‐seed dispersal distance ratio of c. 1.8, consistent with wide‐ranging gene dispersal by both wind and bats. Simulations in an Approximate Bayesian Computation framework suggested low nSSR and cpDNA mutation rates, but imprecise estimates of other demographic parameters, probably due to a substantial gene flow between the Lower Guinean gene pools. The decline of genetic diversity detected in some Gabonese populations could be a consequence of the relatively recent establishment of a closed canopy forest, which could negatively affect M. excelsa’s reproductive system.     

The impact of red howler monkey latrines on the distribution of main nutrients and on topsoil profiles in a tropical rain forest

Scarcity of organic matter and nutrients in the topsoil is a typical feature of lowland primary tropical rain forests. However, clumped defecation by vertebrate herbivore troops and further dung beetle processing may contribute to locally improve soil biological activity and plant growth. We studied the impact of clumped defecation by the red howler monkey (Alouatta seniculus), a frugivorous primate, on the vertical distribution of topsoil (0–6 cm) main nutrients and microstructures in a tropical rain forest (French Guiana). Three latrines, where monkey troops regularly defecate, were sampled, together with adjoining controls for carbon, nitrogen, phosphorus and microscopic components. The vertical distribution of C and N was affected by clumped defecation: nutrients were mostly restricted to the top 2 cm in control areas while latrines exhibited homogeneously distributed C and N, resulting in higher C and N content below 2 cm. No marked effect of defecation was registered on Olsen P. A small although significant increase in pH (0.1–0.3 pH units) and a marked increase in soil respiration (×1.5–2.5) were registered in latrines. Soil microstructures were studied by the small‐volume method. Variation according to depth, site and clumped defecation was analysed by Redundancy Analysis. The three latrines were characterized by an increase in root‐penetrated mineral‐organic assemblages, mainly composed of recent and old earthworm faeces. The local stimulation of plant roots, microbial and earthworm activity was prominent, together with an increase in soil fertility. Consequences for the regeneration of tropical rain forests in the Amazonian basin were discussed, in the light of existing knowledge.     

Isolation and characterization of eight microsatellite loci from Picnic seabream (Acanthopagrus berda)

Acanthopagrus berda (Sparidae) is abundant in estuaries and inshore waters of the tropical Indo‐Pacific oceans. Because of the drastic decrease in the species’ wild populations, there is an urgent need to understand its population structure. Eight microsatellite loci were isolated from A. berda. An analysis of 50 individuals from Tapeng Lagoon, southwestern Taiwan demonstrated a low degree of diversity. The allelic numbers ranged from nine to 20. The observed heterozygosity (H_O) ranged from 0.28 to 0.64 (mean, 0.45). We also investigated the prospective value of the microsatellite primers to examine whether they were applicable to related taxa.     

Detecting climate change induced range shifts: Where and how should we be looking?

Abstract: Global climate warming is expected to cause systematic shifts in the distribution of species and consequently increase extinction risk. Conservation managers must be able to detect, measure and accurately predict range shifts in order to mitigate impacts on biodiversity. However, important responses to climate change may go unnoticed or be dismissed if we fail to collect sufficient baseline data and apply the most sensitive analytical tests. Here we use randomizations of a contemporary data set on rainforest birds of north‐eastern Australia to quantify the sensitivity of three measures for assessing range shifts along altitudinal gradients. We find that smaller range shifts are detectable by analysing change in the mean altitude of presence records rather than upper or lower range boundaries. For a moderate survey effort of 96 surveys, measurements of change in the mean altitude of 34 species have the capacity to provide strong inference for a mean altitudinal range shift as small as 40 m across the species assemblage. We also show that range shifts measured at range boundaries can be potentially misleading when differences in sampling effort between contemporary and historical data sets are not taken into account.     

Do past experience and competitive ability influence foraging strategies of parasitoids under interspecific competition?

Abstract 1. In solitary parasitoids, several species can exploit the same host patch and competition could potentially be a strong selective agent as only one individual can emerge from a host. In cereal crops, Aphidius rhopalosiphi and A. ervi share the grain aphid Sitobion avenae as host. 2. The present work studied foraging strategies of both species on patches already exploited by the other species. The study analysed larval competition in multi‐parasitised hosts and compared the foraging behaviour of females with and without previous experience. 3. It was found that A. ervi wins larval competition three times more often than A. rhopalosiphi. Both species spent less time on patches exploited by a heterospecific than on unexploited ones. When they foraged on heterospecifically exploited patches, experienced females induced less mortality in aphids than inexperienced ones. 4. Although A. rhopalosiphi is a specialist on cereal aphids and is the most abundant species due to its early appearance in the season, S. avenae is still a profitable host for A. ervi, because: (i) A. rhopalosiphi leaves patches partially exploited, (ii) A. ervi wins larval competition in three out of four multi‐parasitised hosts, and (iii) A. ervi is only slightly deterred by the cornicular secretions of the host and can thus easily parasitise hosts.