Landscape genetic analysis of the tropical freshwater fish Mogurnda mogurnda (Eleotridae) in a monsoonal river basin: importance of hydrographic factors and population history

1. We performed spatial genetic analyses, incorporating landscape genetic methods using microsatellite data and phylogeographic analyses using mtDNA data, to identify the principal factors that determine population heterogeneity of the tropical freshwater fish, Mogurnda mogurnda, in the Daly River, northern Australia. We tested the individual and interactive effects of several environmental variables on spatial genetic patterns, including metrics relating to connectivity (i.e. stream distance, maximum stream gradient and elevation), habitat size (i.e. mean annual discharge) and a categorical variable relating to population history, as determined by mtDNA phylogeographic analyses. The Daly River is geomorphologically and hydrologically complex, and M. mogurnda has life history traits that limit its dispersal potential at river basin scales. Thus, we predicted that variables relating to connectivity would be the most important landscape factors driving population structure of the species. 2. Tree‐based phylogeographic analyses indicated four divergent mtDNA lineages within M. mogurnda in the Daly River, although three of the lineages were sympatric in various combinations and did not correspond with microsatellite groups identified by assignment tests. The allopatric mtDNA lineage detected in the uppermost part of the catchment was also identified as being highly differentiated by the microsatellite data, strongly suggesting that it may be a cryptic species. This site was therefore excluded from subsequent landscape genetic analyses. 3. Analyses of Molecular Variance indicated that M. mogurnda has a hierarchical population structure in the Daly River, thus supporting theoretical expectations that hierarchically arranged river habitats in dendritic systems impose hierarchal population structures on lotic species. 4. All landscape genetic analyses rejected stream distance, and supported stream gradient, as the major determinant of spatial genetic variation in M. mogurnda in the Daly River. Support for elevation as a determinant of spatial genetic patterns differed among the landscape genetic methods. Several of the landscape genetic methods also indicate that population history, including secondary contact between divergent and formerly allopatric genetic lineages, has a strong influence on spatial genetic patterns within M. mogurnda in the Daly River. 5. This study demonstrates the need to consider multiple environmental factors, especially factors relating to connectivity, and their interactions in spatial genetic analysis, rather than just geographic distance. Importantly, it demonstrates the need to account for population history and evolutionary divergences in landscape genetic analyses.     

Rapid northwards expansion of a forest insect pest attributed to spring phenology matching with sub‐Arctic birch

Species range displacements owing to shifts in temporal associations between trophic levels are expected consequences of climate warming. Climate‐induced range expansions have been shown for two irruptive forest defoliators, the geometrids Operophtera brumata and Epirrita autumnata, causing more extensive forest damage in sub‐Arctic Fennoscandia. Here, we document a rapid northwards expansion of a novel irruptive geometrid, Agriopis aurantiaria, into the same region, with the aim of providing insights into mechanisms underlying the recent geometrid range expansions and subsequent forest damage. Based on regional scale data on occurrences and a quantitative monitoring of population densities along the invasion front, we show that, since the first records of larval specimens in the region in 1997–1998, the species has spread northwards to approximately 70°N, and caused severe defoliation locally during 2004–2006. Through targeted studies of larval phenology of A. aurantiaria and O. brumata, as well as spring phenology of birch, along meso‐scale climatic gradients, we show that A. aurantiaria displays a similar dynamics and development as O. brumata, albeit with a consistent phenological lag of 0.75–1 instar. Experiments of the temperature requirements for egg hatching and for budburst in birch showed that this phenological lag is caused by delayed egg hatching in A. aurantiaria relative to O. brumata. A. aurantiaria had a higher development threshold (LDT_A.a.=4.71 °C, LDT_O.b.=1.41 °C), and hatched later and in less synchrony with budburst than O. brumata at the lower end of the studied temperature range. We can conclude that recent warmer springs have provided phenological match between A. aurantiaria and sub‐Arctic birch which may intensify the cumulative impact of geometrid outbreaks on this forest ecosystem. Higher spring temperatures will increase spring phenological synchrony between A. aurantiaria and its host, which suggests that a further expansion of the outbreak range of A. aurantiaria can be expected.     

A molecular study of phylogenetic relationships and evolution of antipredator strategies in Australian Diplodactylus geckos, subgenus Strophurus

We present phylogenetic analyses of the lizard genus Diplodactylus subgenus Strophurus using 1646 aligned positions of mitochondrial DNA sequences containing 893 parsimony-informative characters for samples of 12 species of Strophurus and 19 additional Australian gecko species. Sequences from three protein-coding genes (ND1, ND2 and COI) and eight intervening transfer RNA genes were examined using parsimony, maximum-likelihood and Bayesian analyses. Species of Strophurus appeared to form a monophyletic group with the possible exception of S. taenicauda . Strophurus has evolved two distinct defence/display characteristics: caudal glands, which expel an unpalatable substance, and striking mouth colours. Caudal glands appeared to have arisen once in a common ancestor of Strophurus , with dermal augmentation of caudal glands characterizing a subclade within the subgenus. Evolution of yellow and dark-blue mouth colours in Strophurus occurred in the context of diurnal activity and may be interpreted as an augmentation of defensive behavioural displays. Molecular divergence suggests that arboreality evolved in a common ancestor of Oedura and Strophurus approximately 29 Mya and that the caudal glands of Strophurus arose approximately 25 Mya.  © 2004 The Linnean Society of London, Biological Journal of the Linnean Society , 2004, 82 , 123–138.     

Patterns of pupal mortality in field populations of Hydropsyche and Cheumatopsyche (Trichoptera: Hydropsychidae)

SUMMARY. 1. Up to 40% of hydropsychid pupal cases (from three stations on the Credit and Humber Rivers, Ontario, Canada) contained insects already dead when collected; chironomid infestation accounted for up to 82% of total mortality within a taxon from any one station. The remaining mortality appeared to be due to siltation.
2. For all taxa ( Cheumatopsyche Wallengren and four species of Hydropsyche Pictet), and at all stations, prepupae suffered significantly more chironomid-related mortality than did fully-developed pupae.
3. Chironomid infestation generally affected all species of Hydropsyche equally; at some stations, Cheumatopsyche pupae appeared to suffer less chironomid-related mortality than did co-existing Hydropsyche species.
4. Chironomid infestation affected a greater proportion of pupae at the station where the density of pupal cases (per sampling quadrat) was greatest.
5. Vertical distribution of the pupation site had no apparent influence on mortality attributed to either siltation or chironomid infestation.
6. Chironomid infestation varied seasonally; it was greatest in May and July-August at an upstream station, and peaked in June at the downstream stations.
7. Mortality attributed to siltation was relatively constant for all stages and taxa, at all stations, throughout the sampling programme.     

The effect of ryegrass mosaic virus on carbon assimilation and growth of ryegrasses

The growth of simulated swards of Italian and perennial ryegrass, artificially infected with ryegrass mosaic virus (RMV) or RMV-free, was investigated. During the build up of RMV infection, dry-matter yield was usually decreased in infected swards, and the effect was confirmed when single vegetative regrowths of swards were investigated in detail. The primary cause of lower yields in RMV-infected swards appears to be a decrease in net canopy photosynthesis (maximum decrease about 50%) and an associated increase in dark respiration (maximum increase about 50%). The decrease in net canopy photosynthesis is due primarily to a lowered rate of net photosynthesis of constituent leaves within the canopy. A secondary effect of RMV infection is to decrease tillering (maximum decrease about 30%) which results in a change in canopy structure and in particular a lower leaf area index. In the present experiments, lower light utilization by the swards is less important than the decrease in leaf photo-synthetic efficiency in lowering yield.     

Biodiversity of palm fungi in the tropics: are global fungal diversity estimates realistic?

Two questions are addressed: 'How many species of fungi can occur on a single host palm?' and 'What are the implications of this for global estimates of fungal diversity?' Fungal diversity estimates found in the literature are reviewed. Data on the numbers of fungi occurring on the above-ground tissues of six individual palms in the genus Licuala in Australia and Brunei Darussalam (Borneo) are provided. A total of 189 species of fungi were isolated and/or collected from the six palms. In addition, 53 'morphospecies' of mycelia sterilia were isolated, giving a total of 242 taxa from the 2672 isolates/collections made. The three palms in Australia (sampled once) yielded 100 species (each palm supporting an average of 54.7 taxa), while the three palms in Brunei Darussalam (sampled three times) yielded 172 species in total (approximately 111.3 taxa each). The magnitude of global fungal diversity, estimated at 1.5 million species, is discussed. Our results indicate that 33 to 1 would be a more accurate estimate (than 5.7 to 1) of the ratio of host specific fungal to palm species in the tropics. We therefore propose that global estimates of fungal diversity, based on temperate studies, require revision upwards.     

Quantifying the activity levels and behavioural responses of butterfly species to habitat boundaries

1. The ability of species' to undergo climate‐driven range shifts across fragmented landscapes depends on their dispersal ability as well as the structure of the landscape. For species' range shifts to occur, individuals must first leave suitable habitat to seek new habitat; this is likely to depend on the rate of movement of individuals within habitat and the likelihood that a boundary is crossed, once it is encountered. For three species of butterfly with contrasting histories of recent range expansion, we examined the propensity of individuals to move within a habitat and their responses to habitat boundaries. 2. We quantified the extent to which Plebejus argus (Linnaeus) (a declining habitat specialist), Aricia agestis (Schiffermuller) (an expanding generalist) and Polymmatus icarus (Rottemburg) (a geographically ubiquitous generalist) crossed habitat boundaries into unsuitable habitat and moved within suitable habitat. The observed movement was then related to individual and environmental conditions. 3. Species differed in their activity levels in accordance within their recent distribution patterns (P. icarus > A. agestis > P. argus). Our results for P. argus suggest that movement may be motivated by nectar‐seeking, and that males generally move more than females. All three species tended to avoid crossing habitat boundaries; however the proportion of individuals crossing habitat boundaries did not differ significantly among species. 4. We conclude that levels of activity within a habitat, which will affect the frequency with which individuals encounter habitat boundaries, rather than behavioural responses to the boundaries, may be important drivers of distribution change.     

Antibiotic resistance in potato cultivars to the aphid Myzus persicae

Commercially-grown potato cultivars were assessed for antibiotic resistance to Myzus persicae in a culture room at 19°C with a 2°C range and a 16 h photoperiod. The resistant rankings obtained were consistent for the following aphid metrics: maturation time, teneral adult weight, embryo complement and the production of nymphs. Intrinsic rates of increase (r_m) correlated with the above parameters of aphid growth and reproduction but this was not always the case for nymphal survival rate. The cultivars Ulster Tarn, Record and Maris Piper were relatively resistant to M. persicae and cultivars Desirée and King Edward were the most susceptible. When the aphid clone or the culture plants were changed there was no significant effect on the relative resistance of the potato cultivars under test. The relationship between the number of embryos in teneral adults and the production of nymphs by aphids was examined by grouping aphids in weight batches. There was a strong relationship between these two variables.     

Isolation and characterization of polymorphic microsatellite loci in the Australian smelt,Retropinna semoni

Five polymorphic microsatellite loci were isolated from the Australian smelt, Retropinna semoni, in order to study levels of connectivity among populations at various spatial scales. Screening of one natural population (n = 30) from central Victoria, southeastern Australia, yielded nine to 14 alleles per locus with observed levels of heterozygosity ranging from 0.40 to 0.80. All loci were in Hardy–Weinberg equilibrium after Bonferroni correction for multiple tests. These loci should provide a useful tool in further understanding the population genetics of this species.