Patterns of Phanerozoic carbonate platform sedimentation

Carbonate platforms changed substantially in spatial extent, geometry, composition and palaeogeographical distribution through the Phanerozoic. Although reef construction and carbonate platform development are intimately linked today, this was not the case for most of the Phanerozoic. Carbonate production by non-enzymatic precipitation and non-reefal organisms is mostly responsible for this decoupling. Non-reefal carbonate production was especially prolific during times of depressed reef growth, balancing losses in reef carbonate production. Palaeogeographical distribution and spatial extent of Phanerozoic carbonate platforms exhibit trends related to continental drift, evolutionary patterns within carbonate platform biotas, climatic change and, possibly, variations in ocean chemistry. Continental drift moved large Palaeozoic tropical shelf areas into higher latitudes, thereby reducing the potential size of tropical platforms. However, the combined global size of carbonate platforms shows no significant decline through the Phanerozoic, suggesting that availability of tropical shelf areas was not a major control of platform area. This is explained by the limited platform coverage of low-latitude shelves (42% maximum) and occasional high-latitude excursions of platform carbonates. We speculate that reduced tropical shelf area in the icehouse tropics forced the migration of the many carbonate-secreting organisms into higher latitudes and, where terrigenous input was sufficiently low, extensive carbonate platform could develop.     

3. THE GOLDEN ORIOLE (Oriolus oriolus) IN HOLLAND

Even though Sfax salina in Tunisia hosts a significant part of the Mediterranean population of Pied Avocet Recurvirostra avosetta, data on the breeding ecology of this species in this area are lacking. Such data are nonetheless necessary, not only for the understanding of the ecology and dynamics of this species in general, but also for conservation purposes. In this paper we use the results of a one-year monitoring of nests in Sfax salina to provide information on its nesting parameters, in particular nesting phenology, colony size and hatching success. Our results show that Pied Avocets formed dense colonies at the beginning of the nesting season, but colony size decreased as the nesting season advanced. Clutch size varied between 1 and 7 eggs, similar to other Mediterranean and European populations. Hatching success, estimated by the Mayfield method, was relatively low, mainly due to predation by stray dogs. Overall, our work shows that relatively high nest losses occur here. It also highlights the need for management efforts aiming to enhance the reproductive success in this artificial habitat. Creation of suitable and safe nesting sites is proposed.     

Mercapturic acids as biomarkers of exposure to electrophilic chemicals:applications to environmental and industrial chemicals

The use of mercapturic acids (N-acetyl-L-cysteine S-conjugates, MAs) in the biological monitoring of human exposure to environmental and industrial chemicals is receiving more and more attention. Mercapturic acids (MAs) are formed from glutathione (GSH) S-conjugates via the MA-pathway. Although this pathway can lead to different end-products, the formation of MAs is the predominant route in most species, including man. Two GSH S-transferases (GSTs) show genetic polymorphisms in humans and this can have major consequences for individual susceptibility to toxic effects and for MA formation. In occupational toxicology, adducts to biomacromolecules are also used as biomarkers. DNA adducts are a measure for the effective dose, while protein adducts are related to the dose at critical site. Both type of adducts are normally determined in blood, while MAs are determined in urine. Most MAs are excreted with relatively short half-lifes, allowing a direct evaluation of the occupational circumstances. For many compounds similar (linear) dose-dependency was found for MA excretion, formation of macromolecular adducts, and for various biomarkers of toxic effects. These relations together with fact that MAs relate to the electrophilic character of compounds, allows for the conclusion that MAs are biomarkers of toxicologically relevant internal doses of chemicals or their metabolites. An overview will be given here of the use of MAs in the assessment of internal human exposure to electrophilic environmental and industrial chemicals. Additionally, the formation of GSH S-conjugates, their catabolism to MAs and several of the frequently used analytical approaches are discussed. When appropriate, the influence of genetic polymorphisms on formation of MAs and on susceptibility to toxicity will be discussed for different chemicals as well.     

Dealing with allometry in linear and geometric morphometrics: a taxonomic case study in the Leporinus cylindriformis group (Characiformes: Anostomidae) with description of a new species from Suriname

To achieve maximum efficacy, taxonomic studies that seek to distinguish amongst species must first account for allometric shape variation within species. Two recently developed software packages (SMATR and MorphoJ) offer regression‐based allometric approaches that are notable for their statistical power and ease of use and that may prove highly useful to taxonomists working with linear or geometric morphometric data. We investigate species delimitation of the slender‐bodied fishes in the Leporinus cylindriformis group using these programs and demonstrate the utility of the allometric corrections that they provide. Without allometric correction, many pairs of species are difficult to distinguish on the basis of morphometrics, but once regressions are used to account for marked allometric variation within species, most of the recognized species in this group can be readily distinguished with linear or geometric morphometrics, particularly using variation in the depth of the body. Both approaches returned congruent patterns of separation amongst putative species, but the geometric approach in MorphoJ distinguished amongst four more pairs of species than did the linear approach in SMATR and appears to provide slightly more statistical power. Based on distinctive morphometrics, meristics, and coloration, a highly elongate species of Leporinus from the Suriname, Corantijn, and Coppename rivers of Suriname is described herein as a new species, Leporinus apollo sp. nov. The unique L. cylindriformis holotype from Porto de Moz, Brazil differs in morphology, meristics, and pigmentation from specimens commonly referred to that species from the main basin of the Amazon; the latter specimens may represent an additional undescribed species. The L. cylindriformis holotype itself may represent a rare species or a specimen collected at the edge of its native range. Measurements of the holotype and paratype of Leporinus niceforoi, which were collected in the Amazonian slope of Colombia, differ substantially from similarly pigmented and putatively conspecific specimens from Amazonian portions of Ecuador and Peru. Recently collected specimens from Colombia are needed to determine whether the observed morphometric variation encompassed by the current concept of L. niceforoi indicates a morphocline within a single species, suggests the presence of multiple cryptic species, or results from shrinkage of the types. In all these cases, linear or geometric morphometric data can reliably differentiate amongst species, but only after one accounts for allometric shape variation. The new SMATR and MorphoJ software packages both offer easy and effective approaches to such allometrically informed taxonomy, and may prove useful to any systematist working on taxa that change shape as they grow. © 2011 The Linnean Society of London, Zoological Journal of the Linnean Society, 2011, 162 , 103–130.     

The biogeography of the western Mediterranean: elucidating contradictory distribution patterns of differentiation in Maniola jurtina (Lepidoptera: Nymphalidae)

In the western Palaearctic, the Mediterranean zone is an important region where taxa and genes of thermophilous organisms are preserved during glacial stages and new clades are generated. This is achieved through the existence of refugia over Mediterranean Europe and North Africa, where organisms persisted and continued to evolve during the cold phases. However, it is not clear in detail how these refugia function for the maintenance of ancestral taxa, the evolution of new taxa, and as launching pads during postglacial colonizations of northern Europe. One outstanding issue is the incongruence of findings from different marker systems. For the butterfly Maniola jurtina, morphometry and allozyme data analyzed for populations scattered over Europe and North Africa show congruent patterns for Sicily and the Maghreb but produce discrepant results for the Italian mainland. This discrepancy between allozyme and morphological data can be explained by recent gene flow in the wake of postglacial range expansions and shifts. It is evident that colonization histories are far more complex than originally considered. We highlight different aspects of colonization and evolutionary history emerging from the joint use of different marker systems and advocate multiple uses of different markers in paleobiogeographic reconstructions to explore evolutionary events and colonization pathways. © 2011 The Linnean Society of London, Biological Journal of the Linnean Society, 2011, 103 , 571–577.     

Fish Trypanosomes: Their Position in Kinetoplastid Phylogeny and Variability as Determined from 12S rRNA Kinetoplast Sequences

Fish trypanosomes have traditionally been classified according to the host species from which they were isolated, each isolate being regarded as a distinct species. To test the soundness of this practice, the genetic variabilities of the kinetoplast 12S rRNA-encoding genes of different fish trypanosomes isolates were compared. The DNAs were extracted from trypanosomes cloned from blood samples of 15 donors representing ten different fish species in four orders from waters of three major river systems of Central and Northern Europe. Comparison with other trypanosomatid sequences revealed that the fish trypanosomes form a monophyletic group with Trypanosoma brucei as a sister group. Pairwise comparisons of genetic distances yielded a wide range of continuous variation with no indication of any discontinuities attributable to barriers to gene flow. The genetic distances did not correlate with either the identity of the host species or geography. The host specificity of fish trypanosomes appears to be limited.     

Feeding Ecology of Arctic-Nesting Sandpipers During Spring Migration Through the Prairie Pothole Region

ABSTRACT We evaluated food habits of 4 species of spring-migrant calidrid sandpipers in the Prairie Pothole Region (PPR) of North Dakota. Sandpipers foraged in several wetland classes and fed primarily on aquatic dipterans, mostly larvae, and the midge family Chironomidae was the primary food eaten. Larger sandpiper species foraged in deeper water and took larger larvae than did smaller sandpipers. The diverse wetland habitats that migrant shorebirds use in the PPR suggest a landscape-level approach be applied to wetland conservation efforts. We recommend that managers use livestock grazing and other tools, where applicable, to keep shallow, freshwater wetlands from becoming choked with emergent vegetation limiting chironomid production and preventing shorebird use.