Role of cysteine residues in thermal inactivation of fungal Cel6A cellobiohydrolases

Numerous protein engineering studies have focused on increasing the thermostability of fungal cellulases to improve production of fuels and chemicals from lignocellulosic feedstocks. However, the engineered enzymes still undergo thermal inactivation at temperatures well below the inactivation temperatures of hyperthermophilic cellulases. In this report, we investigated the role of free cysteines in the thermal inactivation of wild-type and engineered fungal family 6 cellobiohydrolases (Cel6A). The mechanism of thermal inactivation of Cel6A is consistent with disulfide bond degradation and thiol–disulfide exchange. Circular dichroism spectroscopy revealed that a thermostable variant lacking free cysteines refolds to a native-like structure and retains activity after heat treatment over the pH range 5–9. Whereas conserved disulfide bonds are essential for retaining activity after heat treatment, free cysteines contribute to irreversible thermal inactivation in engineered thermostable Cel6A as well as Cel6A from Hypocrea jecorina and Humicola insolens.     

Perforation of ABS pipes by boring bivalve Martesia striata: a case study

Acrylonitrile butadiene styrene (ABS) pipes are considered to be immune for boring organisms. However, inspection of the offshore cooling water conduits of Lumut combined cycle power plant, Malaysia show that ABS pipes may not necessarily be immune for wood boring pholads, Martesia striata. M. striata caused heavy damage by drilling holes in ABS pipes used (about 5 years) for transportation of hypochlorite from the station towards the intake domes. Hole sizes ranged from 3 to 19 mm² with an average of 11 mm². Unlike other boring animals (e.g. Lithophaga), M. striata penetration is not assisted by chemical dissolution of the substrates and therefore, attack is not limited to calcium carbonate substrates. In this context, material like low dense concrete and rocks, wood, PVC, ABS, etc. is subject to attack of M. striata. It is unknown which synthetic polymerics can be expected to be completely immune for boring bivalves.     

Effect of guanidine on carbohydrate metabolism of rat.

The effect of guanidine hydrochloride on oxidative and non-oxidative energy mechanisms was studied in the liver, muscle and kidney of albino rat. Significant changes were observed indicating disturbance in the glycolytic and citric acid cycle oxidations of tissues.     

Molecular docking analysis of DNA ligase from Staphylococcus aureus with identical polysaccharides

Staphylococcus aureus has been recognized as an important human pathogen for more than 100 years. DNA ligase is the main protein responsible for the replication of S. aureus. DNA ligase was selected as successive target to control the replication mechanism. The antibacterial activity of polysaccharide is known. Therefore, it is of interest to study the activity of Polysaccharide analogues against DNA ligase in S. aureus using molecular docking analysis. We report ten analogues using scoring parameters with best two analogues as potential drug candidate for the combat of S. aureus infection.     

Creatine metabolism of uremic rats.

The effect of guanidine hydrochloride on creatine metabolism of uremic rat was studied. Significant changes were observed in the creatine profiles of liver, kidney and muscle as a function of guanidine hydrochloride.     

The porin AaxA protein model from Chlamydia pneumonia

Chlamydophila pneumoniae is an intracellular pathogen accountable for various acute respiratory infections. C. pneumoniae has a gene cluster which encodes a putative outer membrane porin (aaxA), arginine decarboxylase (CPn1032 or aaxB) and a putative cytoplasmic membrane transporter (CPn1031 or aaxC). Therefore, it is of interest to document a molecular protein model of porin AaxA from Chlamydia pneumonia to gain structure to functional insight on the protein.     

Insecticidal Toxic Proteins Produced by Photorhabdus luminescens akhurstii,a Symbiont of Heterorhabditis indica

We describe the isolation and characterization of an insect pathogenic bacterium from the entomopathogenic nematode Heterorhabditis indica (Karnataka strain), an isolate from the southern regions of India. The strain has been identified and characterized by phenotypic, biochemical tests and PCR-RFLP analysis of the 16S rRNA gene as Photorhabdus luminescens subsp. akhurstii. The insecticidal toxin complex produced by this bacterium has been purified through a series of steps including ultrafiltration, anion exchange chromatography, and gel filtration chromatography. The toxin consists of two protein complexes of approximately 1,000 kD and was active against the larvae of Spodoptera litura and Galleria mellonella.