Biomass of primary and secondary vegetation in Rondônia, Western Brazilian Amazon

Biomass estimates of primary and different ages of secondary vegetation are reported for a tropical forest region in Rondônia, Western Brazilian Amazon. The estimates are based on published allometric equations, and on vegetation composition and allometric data collected in areas of primary forest and secondary vegetation of ages 2, 3, 5, 9, 11, 16 and 18 years. Primary forest biomass estimates varied from 290 to 495 t ha^–1. Secondary vegetation biomass estimates accounted for 40–60% of the primary forest biomass after 18 years of abandonment. Secondary growth rates in lightly used areas are estimated to have varied from 6.6 to 8.7 t ha^–1 y^–1 between the third and the eighteenth years after abandonment. CO₂ sequestration by regrowing vegetation is discussed for two scenarios of land abandonment.     

Shell colour polymorphism in the chiton Ischnochiton striolatus (Gray, 1828) (Mollusca: Polyplacophora) and habitat heterogeneity

Shell colour polymorphism was examined in a population of the polyplacophoran Ischnochiton striolatus (Gray, 1828) living on intertidal rocks in Búzios, Rio de Janeiro State, Brazil. Nine shell colours were identified: green (most common), grey, pink, cream, brown, orange, white, black and purple. The species habitat was also examined using three rock characteristics: volume; turnover frequency, caused by hydrodynamic disturbance; and chromatic composition. Chitons were most frequently encountered on the undersides of rocks of intermediate volume which experienced medium-intensity hydrodynamic disturbance, and which harboured a chromatically rich biotic community. These findings were in agreement with the Intermediate Disturbance Hypothesis. As chitons depend on the biotic community on rocks for food and shelter, a greater variety of colours could increase the chances of camouflage of the morphs against the background, favouring crypsis. It is likely that the frequency at which intermediate-volume rocks are overturned − thus exposing the chitons on them to light − would be sufficient for visual predators to act as selective agents.  © 2005 The Linnean Society of London, Biological Journal of the Linnean Society , 2005, 85 , 543–548.     

Factors determining length distribution and abundance of the European eel, Anguilla anguilla, in the River Mondego (Portugal)

1. The distribution and abundance of the European eel, Anguilla anguilla, were investigated in the Mondego River, a strongly modified river in central Portugal. Nine freshwater sites, located below the first impassable obstacle to eel migration, were surveyed for 2 years. The study was conducted monthly during the first year and seasonally during the second year. Fish were caught by electric fishing and, physical and biotic variables potentially influencing eel length distribution and abundance were determined at each sampling session. 2. Canonical correspondence analysis (CCA) was used to explain the relationships between abiotic and biotic habitat variables, and eel length distribution. Spatial variation was strongly associated with distance from the sea, number of obstacles, river width and percentage of instream cover. Depth, river flow, water temperature and cannibalism had weaker effects on the longitudinal distribution, but contributed as explanatory variables for the model. The influence of spatial variables outweighed the importance of temporal variables as predictors in this model. 3. Length distribution changed in space from a dominance of small eels (<100 mm) closer to the sea to larger eels (≥250 mm) in the upper reaches of the river. The smallest length class (eels <100 mm) was strongly associated with wider stretches where instream cover, mainly composed of aquatic submerged macrophytes, was abundant (>75% area coverage). On the contrary, larger eels (≥250 mm) preferred deeper stretches with stronger river flow and less instream cover. 4. The effect of biotic interactions with conspecifics as well as with the non‐native red swamp crayfish Procambarus clarkii, in sites with poor instream cover, modified this general pattern of distribution leading to fewer eels <100 mm at some sites closer to the sea. Therefore, despite the ubiquity and plasticity shown by this species, there were clear ontogenetic variations in habitat use such that the first two canonical axes of a CCA accounted for 58.4% of the spatial variability in size structure.     

Do distributional shifts of northern and southern species of algae match the warming pattern?

Well-documented changes in species abundances and distributions coinciding with global warming have been increasing during recent years. A trend of raising sea-surface temperature has also been observed along the Portuguese coast which could affect intertidal species' ranges. The present study aimed at evaluating the direction and intensity of distribution changes of macroalgae in the area. The last 50-year trend of coastal air and sea temperature was reassessed, providing an accurate estimate of the warming process. Information on species' range shifts was obtained by comparing data from recent resurveys with historical records of algal distributions collected during the 1950s and 1960s. Although a prevalence of northward migrations was anticipated, this work showed a marked difference in the average direction of changes between cold- and warm-water species. Cold-water species, when considered together, showed no particular shifting trend, because the number of species that shifted north or south was the same. Contrarily, all shifting warm-water species expanded their range northwards. Therefore, generalizations about poleward range shifts due to increasing temperature should be made with caution.     

Aquatic macrophytes diversity in lagoons of a tropical floodplain: The role of connectivity and water level

Abstract The goal of this research is to evaluate how the assemblages of aquatic macrophytes in marginal floodplain habitats, with different degrees of connectivity to the main river, respond to water level fluctuations. Samples were carried out quarterly (May 2000 to March 2002) in seven lagoons of the Upper Paraná River floodplain (22°30′ and 22°45′‐S and 53°15′ and 53°30′‐W) with different degrees of connectivity (connected and disconnected to the main river). In each lagoon, a shore‐pelagic zone transect was marked and at every 2 m the depth and the cover of each aquatic macrophyte species were recorded (Domin‐Krajina scale) in a quadrat of 0.25 m². A total of 29 aquatic macrophyte species and an unusual decrease in water level were recorded in August 2001. Drawdown had a negative impact on species richness, only in connected lagoons, which was shown by a positive relationship between depth and species number (r‐Spearman = 0.86; P < 0.01). Depth affected Beta diversity positively (r‐Spearman = 0.79; P < 0.05). Drawdown affected the connected and disconnected lagoons differently, which can be attributed to their different morphometry. In this period, ‘habitat contraction’ was higher on connected lagoons. Positive correlation between mean species number and depth, and between beta diversity and depth, are factors that support this affirmation. Indicator species analysis showed that for disconnected lagoons, Oxycaryum cubense (Cyperaceae), Polygonum meissnerianum (Polygonaceae) and P. ferrugineum, with indicator values (IndVal) of 53, 30 and 25%, respectively, were indicator species. Salvinia spp. (Salvinaceae) (62%), P. acuminatum (44%) and the Ricciaceae Ricciocarpus natans (0%) were the indicator species of the connected lagoons.     

Isolation and characterization of two dinucleotide and four tetranucleotide polymorphic microsatellite loci in the Iberian midwife toad Alytes cisternasii

The Iberian midwife toad Alytes cisternasii is an endemic species of the southwestern and central parts of the Iberian Peninsula. Allozyme analysis of Iberian midwife toads indicated no inter‐ or intrapopulation variation and a more sensitive method is required to quantify genetic differentiation and gene flow between populations of this species. We describe here the development of primers for the amplification by the polymerase chain reaction (PCR) of six polymorphic microsatellite loci in A. cisternasii.     

Isolation and characterization of polymorphic microsatellite loci in the scarlet ibis (Eudocimus ruber— Threskiornithidae‐Aves)

Here we presented 10 polymorphic microsatellite loci obtained from scarlet ibis through an enriched genomic library. The analysis of 45 individuals from three Brazilian natural populations showed allelic diversity ranged from three to 17 alleles, observed heterozygosity ranged from 0.03 to 0.92, and expected heterozygosity ranged from 0.06 to 0.92. These highly variable microsatellite loci can provide means for assessing overall genetic variation in its remnant natural populations, which may help the development of effective conservation programs.     

Further Characterization of Carbohydrate-Containing Fractions from Trypanosoma mega1

Epimastigotes of Trypanosoma mega were submitted to phenol extraction after lipid extraction, providing an extract whose carbohydrate portion (30%) contained fucose, ribose, xylose, mannose, galactose, and glucose. The purified fraction recovered in the void volume of Bio Gel P-150 gave on SDS-PAGE a band of M_r～ 55,000 positive for protein and carbohydrate and a diffuse band strongly positive for carbohydrate and lipids (M_r～ 22,000). The structural analysis of the carbohydrate moiety of this fraction by GLC-MS indicated the presence of nonreducing end groups of fucopyranose, mannopyranose, and galactopyranose, 3-O- and 4-O-substituted and 2,3- and 2,4-di-O-substituted galactopyranosyl units. Extraction of this fraction with chloroform/methanol/water provided a soluble fraction that on SDS-PAGE gave rise to a carbohydrate and lipid-positive band (M_r～ 22,000). This fraction contained fucose, mannose, and galactose (1:1:1). As main branch points, 2,3-di-O-substituted galactopyranosyl units were present according to methylation data. Similar proportions of fucopyranosyl, mannopyranosyl, galactopyranosyl end units were present. The presence of lipids in this fraction was confirmed by methanolysis following isolation and characterization of the corresponding fatty acid methyl esters. Palmitic acid (16:0) and an 18:1 fatty acid were the predominant fatty acids.