Are tree trunks habitats or highways? A comparison of oribatid mite assemblages from hoop-pine bark and litter

Abstract Oribatid mites (Acari: Oribatida) are among the most diverse and abundant inhabitants of forest soil and litter, but also have species-rich assemblages on bark and in the canopies of trees. It is unclear whether the trunk of a tree acts simply as a 'highway' for movement of mites into and out of the canopy, or whether the trunk has a distinctive acarofauna. We compare oribatid assemblages from the trunk bark of hoop pine ( Araucaria cunninghamii ) with those from litter collected beneath the same trees. A 1.0 by 0.5 m area of bark was sampled from three trees at each of five sites using a knockdown insecticide. A 1-L sample of leaf litter was collected as close as possible to the base of each sampled tree. Mites were extracted using Tullgren funnels, identified to genus and morphospecies, and counted. Assemblages were almost 100% distinct, with only one oribatid morphospecies ( Pseudotocepheus sp.) collected from both litter and bark. Litter had a higher taxon richness than bark in total and per sample, but oribatids made up a greater percentage of the acarofauna in the bark samples. We had expected that the more consistent physical substrate of bark would be reflected in greater similarity of oribatid faunas on trunks than in litter; however, the opposite proved to be the case. We conclude that hoop-pine trunks are habitats rather than highways for oribatid mites. Based on the observed higher turnover among bark faunas, tree trunks may represent habitat islands whose colonisation by particular oribatid species is more stochastic than that of the more continuous 'sea' of litter.     

Mapping the genetic determinants of pathogenicity and plaque phenotype in swine vesicular disease virus

A series of recombinant viruses were constructed using infectious cDNA clones of the virulent J1'73 (large plaque phenotype) and the avirulent H/3'76 (small plaque phenotype) strains of swine vesicular disease virus to identify the genetic determinants of pathogenicity and plaque phenotype. Both traits could be mapped to the region between nucleotides (nt) 2233 and 3368 corresponding to the C terminus of VP3, the whole of VP1, and the N terminus of 2A. In this region, there are eight nucleotide differences leading to amino acid changes between the J1'73 and the H/3'76 strains. Site-directed mutagenesis of individual nucleotides from the virulent to the avirulent genotype and vice versa indicated that A at nt 2832, encoding glycine at VP1-132, and G at nt 3355, encoding arginine at 2APRO-20, correlated with a large-plaque phenotype and virulence in pigs, irrespective of the origin of the remainder of the genome. Of these two sites, 2APRO-20 appeared to be the dominant determinant for the large-plaque phenotype but further studies are required to elucidate their relative importance for virulence in pigs.     

RPA is an initiation factor for human chromosomal DNA replication

The initiation of chromosomal DNA replication in human cell nuclei is not well understood because of its complexity. To allow investigation of this process on a molecular level, we have recently established a cell-free system that initiates chromosomal DNA replication in an origin-specific manner under cell cycle control in isolated human cell nuclei. We have now used fractionation and reconstitution experiments to functionally identify cellular factors present in a human cell extract that trigger initiation of chromosomal DNA replication in this system. Initial fractionation of a cytosolic extract indicates the presence of at least two independent and non-redundant initiation factors. We have purified one of these factors to homogeneity and identified it as the single-stranded DNA binding protein RPA. The prokaryotic single-stranded DNA binding protein SSB cannot substitute for RPA in the initiation of human chromosomal DNA replication. Antibodies specific for human RPA inhibit the initiation step of human chromosomal DNA replication in vitro. RPA is recruited to DNA replication foci and becomes phosphorylated concomitant with the initiation step in vitro. These data establish a direct functional role for RPA as an essential factor for the initiation of human chromosomal DNA replication.     

IL-18 has IL-12-independent effects in delayed-type hypersensitivity: studies in cell-mediated crescentic glomerulonephritis

IL-18 (formerly known as IFN-gamma-inducing factor) enhances Th1 responses via effects that are thought to be dependent on and synergistic with IL-12. The potential for IL-18 to exert IL-12-independent effects in delayed-type hypersensitivity (DTH) responses was studied in a model of Th1-directed, DTH-mediated crescentic glomerulonephritis induced by planting an Ag in glomeruli of sensitized mice as well as in cutaneous DTH. Sensitized genetically normal (IL-12(+/+)) mice developed proteinuria and crescentic glomerulonephritis with a glomerular influx of DTH effectors (CD4(+) T cells, macrophages, and fibrin deposition) in response to the planted glomerular Ag. IL-12p40-deficient (IL-12(-/-)) mice showed significant reductions in crescent formation, proteinuria, and glomerular DTH effectors. Administration of IL-18 to IL-12(-/-) mice restored the development of histological (including effectors of DTH) and functional glomerular injury in IL-12(-/-) mice to levels equivalent to those in IL-12(+/+) mice. IL-18 administration to IL-12(-/-) mice increased glomerular ICAM-1 protein expression, but did not restore Ag-stimulated splenocyte IFN-gamma, GM-CSF, IL-2, or TNF-alpha production. Sensitized IL-12(+/+) mice also developed cutaneous DTH following intradermal challenge with the nephritogenic Ag. Cutaneous DTH was inhibited in IL-12(-/-) mice, but was restored by administration of IL-18. IL-12(+/+) mice given IL-18 developed augmented injury, with enhanced glomerular and cutaneous DTH, demonstrating the synergistic effects of IL-18 and IL-12 in DTH responses. These studies demonstrate that even in the absence of IL-12, IL-18 can induce in vivo DTH responses and up-regulate ICAM-1 without inducing IFN-gamma, GM-CSF, or TNF-alpha production.     

Museum archives revisited: Central Asiatic hawkmoths reveal exceptionally high late Pliocene species diversification (Lepidoptera,Sphingidae)

Three high‐elevation Hyles species of Central Asia have proven difficult to sample, and thus, only a limited number of specimens are available for study. Ancient DNA techniques were applied to sequence two mitochondrial genes from ‘historic’ museum specimens of Hyles gallii, Hyles renneri and Hyles salangensis to elucidate the phylogenetic relationships of these species. This approach enabled us to include the holotypes and paratypes. The status of H. salangensis as a species endemic to a mountain range north of Kabul in Afghanistan is confirmed by this study. It is most closely related to Hyles nicaea and H. gallii, and quite distant from the clade comprising the species from Hyles vespertilio to Hyles tithymali, despite this group and H. salangensis both completely lacking an arolium on the pretarsus. Our results show that the samples assigned to H. renneri and Hyles livornica tatsienluica are conspecific and so we reinstate Hyles tatsienluica stat. nov. as the valid name for this species and synonymize H. renneri syn. nov. with it. This study shows that the distribution range postulated for H. tatsienluica extends from Nepal well into the mountains of south‐western China. The distribution ranges of H. livornica and H. tatsienluica overlap. The study confirms the previously proposed synonymies of Hyles nepalensis, Hyles gallii intermedia and Hyles gallii tibetanica with H. gallii. Extensive species sampling (over 80% of Hyles species) in this study allowed additional analyses. The dated phylogeny reveals the global Hyles hawkmoth radiation to be much more recent than previously thought: it began in the Late Miocene and culminated in a Pleistocene burst of diversification in the Northern Hemisphere. Ancestral ranges of basal nodes were reconstructed as highly equivocal, but the Neotropics has the highest probability in the two oldest nodes. Although the origins of the Madagascan and Australian species also remain ambiguous, a large crown clade of fifteen species was reconstructed to have originated in the Palaearctic. The wide distribution ranges of the two migratory species, H. livornica and H. gallii, appear to blur any traces of the biogeographic origin of the clades containing these species. Specialization in larval host plant use onto particular plant families from the ancestral condition ‘polyphagous’ may have led to an increased rate of speciation and phylogenetic diversification in three subgroups of Hyles (the Hawaiian clade, the Hyles centralasiae group and the Hyles euphorbiae complex).     

Effects of Habitat Disturbance can be Subtle Yet Significant: Biodiversity of Hawkmoth-Assemblages (Lepidoptera: Sphingidae) in Southeast-Asia

Sphingid biodiversity was compared in a large number of light-trapping samples on Borneo and elsewhere in the Indo-Australian tropics, using our own quantitative light-trapping samples supplemented by other collectors’ published and unpublished data. No effects of anthropogenic habitat disturbance on the within-habitat diversity (measured as Fisher’s α) were observed, but the faunal composition of assemblages differs significantly under varying degrees of disturbance. Altitude, year of sampling and sampling regime (full night vs. part of the night) were identified as additional parameters that influence the composition of local samples. The frequency of subfamilies in samples varies under different disturbance regimes: Smerinthinae decline along a gradient from primary habitats to heavily disturbed sites, while Macroglossinae show the reverse trend. Connections between the reactions of subfamilies to disturbance and altitude and potential life-history differences between the subfamilies are discussed. Hypothetically, capital breeding Smerinthinae might be commoner and more speciose in stable primary habitats, whereas many income breeding Macroglossinae are probably adapted to thrive in ephemeral, disturbed habitats. Furthermore, we show that estimates from local samples fall short of the total known species richness of Borneo by about 10%.     

Scientific Note: First record of the remarkable clearwing moth,Akaisphecia melanopuncta O. Gorbunov & Arita, 1995 (Sesiidae: Sesiinae: Osminiini), from Thailand,with comments on likely Batesian mimicry

The sesiid moth, Akaisphecia melanopuncta O. Gorbunov & Arita, 1995, is recorded from Thailand for the first time, having originally been described from Vietnam and subsequently recorded from Laos. Photographs of a living individual are presented that illustrate that in life it is a very good mimic of red-and-black aposematic Hemiptera (Heteroptera) such as various predatory pyrrhocorids.     

The biodiversity of Diptera in Old World rain forest surveys: a comparative faunistic analysis

Aim Identify the taxonomic patterns and the relative importance of particular families of Diptera sampled in comparative biodiversity surveys carried out at seven rain forest locations. We test and quantify the contention that different trapping methods routinely target different families. We identify the south–north (and upland/lowland) patterns and generate a set of hypotheses concerning mechanisms underlying these patterns. Location Australia and Papua New Guinea. Methods A total of 28,647 Diptera collected using canopy knockdown, yellow pan (water) traps and Malaise traps have been sorted to 56 families following these surveys. Comparative analyses across sites from Lamington National Park in south‐east Queensland, Australia to the Kau Wildlife area in Madang Province, Papua New Guinea, of the dipteran assemblages, and separately, of the 14 families which collectively made up 95.8% of the sample, are presented. Results Ordination by multi‐dimensional scaling and analyses of variances showed that the three methods complemented each other in terms of target families and, together, sampled a large proportion of the expected fauna of these sites. Ordinations on a method‐by‐method basis permitted the identification of groups of sites and analyses of variance indicated which taxa differed significantly across these groups. Main conclusions Recurrent patterns and associated hypotheses about their generation emerge from the data. These mirror floristic differences and reflect the biogeographic history of the sites since the Miocene. Clear linkages between the lowland faunas of Papua New Guinea and northern Australia are evident and are reflected in the abundances of the Dolichopodidae, Empididae, Muscidae and Tipulidae (other groupings underlined the essential difference of the New Guinean fauna which had characteristic proportions of Cecidomyiidae, Chironomidae, Dolichopodidae, Phoridae and Psychodidae). A subtropical grouping of families was evident comprising, inter alia, Chloropidae, Mycetophilidae, Drosophilidae and Phoridae which was frequently linked with the higher elevation tropical fauna at Robson's Creek, Atherton Tablelands. The long isolated, high elevation, rain‐forested massif at Eungella, central Queensland often emerged as a unique entity in the analyses, characterized by the high numbers of and proportions of Chironomidae, Psychodidae, Tipulidae and Empididae. This study supports the case for the wider use of Diptera in biodiversity analyses, complementing extensive earlier analyses which have used, predominantly, large coleopteran assemblages. The results indicate the potential power of family‐level analyses at large geographical scales and contribute to the ongoing debate on ‘taxonomic sufficiency’.     

Reconsideration of anopheline mosquito phylogeny (Diptera: Culicidae: Anophelinae) based on morphological data

The phylogeny of anopheline mosquitoes (Culicidae: Anophelinae) is re‐examined using morphological data derived from adults, fourth‐instar larvae and pupae. Based on the data set of Sallum et al. (2000), we add some previously missing data and simplify and recode characters to eliminate ambiguities and more accurately reflect homologies, with special emphasis on characters of the male genitalia that provide the main criteria for the subgeneric classification of genus Anopheles. The principal aim of the study is to assess objectively the phylogenetic relationships and classification of two taxa not included by Sallum et al. (2000): Anopheles corethroides, a representative of the Australasian Stigmaticus Group, and An. kyondawensis, an unusual Oriental species whose adult and pupal stages were only recently discovered. The revised data set consists of 167 characters for 66 species representing the three traditionally recognised genera of Anophelinae, the six traditionally accepted subgenera of genus Anopheles and all informal series and most species groups of subgenera Anopheles, Cellia and Nyssorhynchus. The data are analysed using equal weighting (EW) and implied weighting (IW). Analysis under EW generates a strict consensus tree with principal lineages consistent with those reported by Sallum et al. (2000). Analysis under IW supports the monophyly of Anophelinae, the basal position of Chagasia, the monophyly of subgenera Cellia, Kerteszia and Nyssorhynchus, and the sister relationship of Kerteszia + Nyssorhynchus, but otherwise yields relationships that differ significantly in one respect or another from those obtained in all previous analyses of both morphological and molecular data. Subgenus Anopheles is arrayed as a polyphyletic lineage basal to a monophyletic clade comprising the Neotropical Kerteszia + Nyssorhynchus and the Old World Cellia in a sister‐group relationship. Bironella, Lophopodomyia and Stethomyia are firmly nested within subgenus Anopheles, which would nevertheless still be paraphyletic if these taxa were subsumed within it. Anopheles kyondawensis is well supported as the sister group of Bironella + all other Anopheles. Bironella, Stethomyia, An. corethroides and several other Anopheles clades are each strongly supported in a pectinate series of relationships, terminating in the clade comprising subgenera Cellia, Kerteszia and Nyssorhynchus. These relationships and other aspects of the phylogeny are discussed in relation to the formal and informal classification of genus Anopheles.