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排序方式: 共有195条查询结果,搜索用时 15 毫秒
41.
42.
Pseudomonas aeruginosa diaminopimelate decarboxylase: evolutionary relationship with other amino acid decarboxylases 总被引:1,自引:0,他引:1
Martin C; Cami B; Yeh P; Stragier P; Parsot C; Patte JC 《Molecular biology and evolution》1988,5(5):549-559
The lysA gene encodes meso-diaminopimelate (DAP) decarboxylase
(E.C.4.1.1.20), the last enzyme of the lysine biosynthetic pathway in
bacteria. We have determined the nucleotide sequence of the lysA gene from
Pseudomonas aeruginosa. Comparison of the deduced amino acid sequence of
the lysA gene product revealed extensive similarity with the sequences of
the functionally equivalent enzymes from Escherichia coli and
Corynebacterium glutamicum. Even though both P. aeruginosa and E. coli are
Gram-negative bacteria, sequence comparisons indicate a greater similarity
between enzymes of P. aeruginosa and the Gram- positive bacterium C.
glutamicum than between those of P. aeruginosa and E. coli enzymes.
Comparison of DAP decarboxylase with protein sequences present in data
bases revealed that bacterial DAP decarboxylases are homologous to mouse
(Mus musculus) ornithine decarboxylase (E.C.4.1.1.17), the key enzyme in
polyamine biosynthesis in mammals. On the other hand, no similarity was
detected between DAP decarboxylases and other bacterial amino acid
decarboxylases.
相似文献
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Recognizing the forest for the trees: testing temporal patterns of cladogenesis using a null model of stochastic diversification 总被引:2,自引:1,他引:1
Computer simulations are developed and employed to examine the expected
temporal distributions of nodes under a null model of stochastic lineage
bifurcation and extinction. These Markovian models of phylogenetic process
were constructed so as to permit direct comparisons against empirical
phylogenetic trees generated from molecular or other information available
solely from extant species. For replicate simulated phylads with n extant
species, cumulative distribution functions (cdf's) of branching times were
calculated, and compared (using the Kolmogorov-Smirnov test statistic D) to
those from three published empirical trees. Molecular phylogenies for
columbine plants and avian cranes showed statistically significant
departures from the null expectations, in directions indicating recent and
ancient species' radiations, respectively, whereas a molecular phylogeny
for the Drosophila virilis species group showed no apparent historical
clustering of branching events. Effects of outgroup choice and phylogenetic
frame of reference were investigated for the columbines and found to have a
predictable influence on the types of conclusions to be drawn from such
analyses. To enable other investigators to statistically test for
nonrandomness in temporal cladogenetic pattern in empirical trees generated
from data on extant species, we present tables of mean cdf's and associated
probabilities under the null model for expected branching times in phylads
of varying size. The approaches developed in this report complement and
extend those of other recent methods for employing null models to assess
the statistical significance of pattern in evolutionary trees.
相似文献
47.
We studied antipredatory responses of lotic mayfly (Baetis) nymphs in a factorial experiment with four levels of fish presence: (1) a freely foraging fish (the European minnow,Phoxinus phoxinus), (2) a constrained fish, (3) water from a fish stream, (4) water from a fishless stream. LargeBaetis nymphs drifted mainly during night-time in treatments involving either the chemical or actual presence of fish, whereas no diel periodicity was observed when the water was not conditioned with fish odour. The response was strongest when the fish was uncaged, which suggests that visual or hydrodynamic cues are needed in addition to chemical ones for an accurate assessment of predation risk. Fish presence had no effect on the drift rates of small nymphs. Instead, they increased their refuge use in the presence of a live fish. Chemical cues alone did not have any effect on the refuge use of any of theBaetis size classes. Our results indicate active drift entry by mayfly nymphs. Because predation pressure is spatially and temporally variable, nymphs must sample the environment in order to locate predator-free areas or areas with low predation risk. Drifting should be the most energy-saving way to do this. To avoid the risk from visually feeding fish, large individuals can sample safely (i.e. enter drift) only at night-time, while the small ones can also do this safely during the day. We suggest that, contrary to some earlier assumptions, mayfly drift is not a fixed prey response. Instead,Baetis nymphs are able to assess the prevailing predation pressure, and they adjust their foraging behaviour accordingly. 相似文献
48.
Diel feeding periodicity, daily ration and prey selectivity in juvenile brown trout in a subarctic river 总被引:4,自引:0,他引:4
P. Kreivi T. Muotka † A. Huusko ‡ A. Mäki-Petäys ‡ A. Huhta ¶ K. Meissner † 《Journal of fish biology》1999,55(3):553-571
Feeding of age-1 brown trout Salmo trutta in a third-order river in northern Finland was usually highest in the twilight hours and lowest around midday. Diel periodicity in food intake was less distinct and rarely significant for age-0 trout. Daily rations declined seasonally, being lowest in October, and highest in June (age-1 trout) or early August (age-0 trout). Prey selection did not differ between day and night, but differences between age classes and sampling dates were distinct. Age-0 trout preferred Ephemerella nymphs in summer and Micrasema larvae later in the season. Age-1 trout fed selectively on caddis larvae on all sample dates. Aerial insects and Baetis nymphs were avoided by both age classes on most occasions. These patterns of preference are probably explained by a trend towards epibenthic feeding, which may be a predominant foraging mode in some trout populations. Nevertheless, repuscular peaks in feeding periodicity suggest that trout were able to capitalize on the increased availability of drifting prey in the twilight, especially in the early summer months. 相似文献
49.
Johan Reinert Vikan Bård Gunnar Stokke Jarkko Rutila Esa Huhta Arne Moksnes Eivin Røskaft 《Evolutionary ecology》2010,24(5):1141-1157
The brood parasitic common cuckoo Cuculus canorus has a history of coevolution that involves numerous passerine hosts, but today only a subset is known to be regularly parasitised
in any area. In some hosts, there is significant variation in the occurrence of parasitism between populations, but still
individuals in non-parasitised populations show strong antiparasite defences. In the present study we compared the strength
of egg rejection of four distant Fennoscandian brambling Fringilla montifringilla populations experiencing different levels of cuckoo parasitism (0–6%). Egg rejection ability was in general very well developed
and we did not find any population differences in the relationship between egg rejection probability and similarity between
host and experimental parasitic eggs. Furthermore, bramblings very rarely made errors in rejection, indicating that selection
against rejection behaviour is likely to be very weak. The brambling-cuckoo system therefore differs from other well studied
systems which are characterised by pronounced spatial and temporal variation in the host’s level of defence. This result is
unlikely to reflect independent replication of the same evolutionary trajectory because the weak breeding site tenacity of
bramblings should result in an extreme amount of gene flow within the distribution area and thus strongly impede localised
responses to selection. Instead, lack of geographic variation has more likely arisen because bramblings respond to selection
as one evolutionary unit, and because the average parasitism pressures have been high enough in the past to cause regional
fixation of rejection alleles and evolution of clutch characteristics that facilitate cost free egg recognition. 相似文献
50.
JC Biro 《Theoretical biology & medical modelling》2006,3(1):15-12