青藏高原草地产量与草畜平衡变化

深入了解青藏高原草地生产力与草畜平衡状态的变化,是青藏高原生态屏障建设和生态环境保护的基础。利用遥感植被指数和叶面积指数产品,基于VIP生态水文过程模型,模拟分析了青藏高原2000—2018年间草地生产力的时空格局,并结合同期农牧业统计资料,分析了青藏高原县域尺度草畜平衡状态的变化。结果表明:青藏高原草地多年平均净初级生产力(NPP)为158.4 g C·m^-2·a^-1;近20年来草地生产力上升趋势明显,显著上升面积的比例为44.7%。气候变暖、降水量增加、草本植物生长期延长和大气CO₂浓度升高是青藏高原草地生产力提高的主要驱动因素。基于草场产量估算的青藏高原平均理论载畜量为1.17 SU·hm^-2,年增长率为0.011 SU·hm^-2。2000年以来青藏高原草地超载情况总体趋于好转,严重超载县的面积比例已降至20%以下,其中超载程度较严重的地区,畜牧业的维持和发展主要依靠作物秸秆补饲。研究结果可为区域农牧业结构调整和生态环境保护提供科学依据。     

龙眼组蛋白去乙酰化酶基因DlHDT1的克隆与特性分析

组蛋白去乙酰化是植物表观遗传调控的重要组成部分,对染色体结构修饰和基因表达调控发挥着重要的作用。为深入探究组蛋白去乙酰化酶基因(histone deacetylase 1,HDT1)在龙眼体胚发生过程中的功能,该研究结合龙眼基因组数据,采用RT-PCR方法克隆得到龙眼组蛋白去乙酰化酶基因(DlHDT1),对其进行生物信息学分析及亚细胞定位观察,同时结合转录组数据分析DlHDT1在体胚发生过程中的FPKM值,并利用qRT-PCR技术检测PEG6000和NaCl处理下DlHDT1的表达模式。结果表明:(1)DlHDT1基因CDS序列全长918 bp,编码305个氨基酸,该蛋白为不稳定亲水性蛋白,不含信号肽和跨膜结构,共含43个磷酸化位点,相对分子量为32 585.54 Da,等电点为4.65;进化树分析显示龙眼DlHDT1与漾濞槭亲缘关系最近(78.76%)。(2)亚细胞定位显示,DlHDT1蛋白定位于细胞核中;顺式作用元件分析发现DlHDT1基因含有大量光响应元件和脱落酸、茉莉酸甲酯等激素及逆境胁迫响应元件;转录组数据显示,DlHDT1在龙眼体胚发生不同时期均有表达,在胚性愈伤组织(EC)阶段表达最低,在球形胚(GE)阶段表达最高。(3)qRT-PCR显示,在PEG6000和NaCl处理下DlHDT1基因,呈下调表达趋势,推测DlHDT1可能参与调控龙眼对干旱及盐胁迫的响应,并存在负调控关系。研究认为,DlHDT1为核定位基因,可能参与龙眼体胚形态建成并在龙眼响应非生物逆境胁迫过程中发挥重要作用。     

芍药苷对巨细胞病毒感染小鼠脑组织损伤及海马神经元细胞凋亡的影响

海马组织在学习、记忆中发挥着重要作用,而且海马组织对巨细胞病毒(Cytomegalovirus,CMV)感染非常敏感,会使海马组织中的神经元大量丢失,神经元细胞发生凋亡.芍药苷可以减轻小鼠炎性脑损伤,其可能与提高机体抗氧化能力、清除体内自由基有关,但是芍药苷在CMV感染小鼠中研究甚少.为探讨芍药苷对CMV感染小鼠脑组织损伤及海马神经元细胞凋亡的影响,本研究将新生昆明小鼠随机分为4组:对照组、小鼠巨细胞病毒组(MCMV组)、芍药苷低剂量组(Pae-L组)和芍药苷高剂量组(Pae-H组),后三组通过腹腔注射MCMV病毒悬液建立模型,之后对照组和MCMV组经腹腔注射生理盐水,Pae-L组经腹腔注射10 mg/kg芍药苷,Pae-H组经腹腔注射30 mg/kg芍药苷;荧光定量PCR检测各组小鼠脑组织中MCMV-DNA载量的变化;Morris水迷宫检测各组小鼠学习记忆功能指标的变化;蛋白质免疫印迹(Western Blot)检测各组小鼠脑组织中MMP-9的表达变化;NeuN免疫染色检测各组小鼠海马组织中NeuN阳性细胞的变化;TUNEL染色检测各组小鼠海马组织中神经元细胞凋亡的变化;Western Blot检测各组小鼠海马组织中Bax、Bcl-2蛋白表达的变化.结果显示,与对照组比较,MCMV组小鼠的逃避潜伏期明显增加,穿越平台次数明显减少,脑组织中MMP-9蛋白表达水平显著上调,海马组织中NeuN阳性细胞数目显著减少,海马组织中神经元细胞凋亡指数显著增加,海马组织中Bax蛋白表达水平显著上调,Bcl-2蛋白表达水平显著下调;与MCMV组比较,Pae-L组和Pae-H组小鼠脑组织中MCMV-DNA载量减少,逃避潜伏期减少,穿越平台次数增加,脑组织中MMP-9蛋白表达水平下调,海马组织中NeuN阳性细胞数目增加,海马组织中神经元细胞凋亡指数减少,海马组织中Bax蛋白表达水平下调,Bcl-2蛋白表达水平明显上调.本研究提示,芍药苷能够改善MCMV感染引起的脑损伤,减轻海马组织中神经元细胞的凋亡.     

African Swine Fever Virus MGF-110-9L-deficient Mutant Has Attenuated Virulence in Pigs

African swine fever virus(ASFV) is the etiological agent of African swine fever(ASF), an often lethal disease in domestic and wild pigs. ASF represents a major threat to the swine industry worldwide. Currently, no commercial vaccine is available because of the complexity of ASFV or biosecurity concerns. Live attenuated viruses that are naturally isolated or genetically manipulated have demonstrated reliable protection against homologous ASFV strain challenge. In the present study, a mutant ASFV strain with the deletion of ASFV MGF-110-9 L(ASFV-D9 L) was generated from a highly virulent ASFV CN/GS/2018 parental strain, a genotype II ASFV. Relative to the parental ASFV isolate, deletion of the MGF-110-9 L gene significantly decreased the ability of ASFV-D9 L to replicate in vitro in primary swine macrophage cell cultures. The majority of animals inoculated intramuscularly with a low dose of ASFV-D9 L(10 HAD50) remained clinically normal during the 21-day observational period. Three of five ASFV-D9 L-infected animals displayed low viremia titers and low virus shedding and developed a strong virus-specific antibody response, indicating partial attenuation of the ASFV-D9 L strain in pigs. The findings imply the potential usefulness of the ASFV-D9 L strain for further development of ASF control measures.     

基于转录组分析酸枣仁斯皮诺素生物合成途径的相关基因

采用转录组测序技术分析酸枣仁(Ziziphi spinosae semen)不同发育时期基因表达差异,识别酸枣仁黄酮生物合成途径的相关基因,为进一步分析酸枣仁中黄酮类成分生物合成相关酶基因提供研究基础.以3个不同生长发育时期的酸枣仁样本为供试材料,采用Illumina Hiseq 4000进行转录组测序,并从头拼接,对转录本进行功能注释和差异性分析.经StringTie软件组装拼接得到74472个转录本,其中有26.83％在NR、Swiss-Prot、Pfam、GO、KOG、KEGG数据库中得到注释;代谢通路分析结果发现,在酸枣仁转录组中与黄酮类合成途径相关的11条差异表达基因可能编码斯皮诺素合成途径的一些酶类.酸枣仁中黄酮类成分斯皮诺素相关转录本信息为阐明斯皮诺素在生长期的积累提供重要依据,为提高酸枣仁品质研究提供参考.     

Congruent spatial patterns of species richness and phylogenetic diversity in karst flora: Case study of Primulina (Gesneriaceae)

The karst landform in southern China is renowned for its high levels of species diversity and endemism. Globally, karst ecosystems are under threat from unsustainable anthropogenic disturbance and climate changes and are among the most threatened ecosystems worldwide. In this study, we used the typical karst endemic genus in southern China, Primulina Hance, as a model to identify areas within the karst landform with high diversity and to investigate congruence between phylogenetic and species‐based measures of diversity. Using phylogenetic information and species distribution data, we measured geographical patterns of diversity with four metrics: species richness (SR), corrected weighted endemism (CWE), phylogenetic diversity (PD), and phylogenetic endemism (PE). Our results revealed a high spatial congruence among SR, PD, and PE, with hotspot areas identified in the Nanling Mountains (i.e., north Guangdong and northeast Guangxi) and southeast Yungui Plateau (i.e., north and southwest Guangxi), whereas the hotspots of CWE are comparatively uniform throughout the geographic extent. The categorical analysis of neo‐ and paleoendemism identified a pattern of mixed neo‐ and paleoendemism in numerous grid cells, suggesting that karst areas in southern China have acted as both “museums” and “cradles” of plant evolution. Conservation gap analysis of hotspots revealed that the majority of prioritized hotspots (>90%) of the genus are outside of protected areas, therefore indicating the limited effectiveness of national nature reserves for the karst flora. Overall, our results suggest that the karst flora merits more conservation attention and SR can be an effective surrogate to capture PD in conservation planning.     

Slc20a1b is essential for hematopoietic stem/progenitor cell expansion in zebrafish

Science China Life Sciences - Hematopoietic stem and progenitor cells (HSPCs) are able to self-renew and can give rise to all blood lineages throughout their lifetime, yet the mechanisms regulating...     

A botanical medicine dragon’s blood exhibited clinical antithrombosis efficacy similar to low molecular weight heparin

Deep vein thrombosis(DVT) is a common complication following traumatic fracture with a 0.5%–1% annual incidence. Low molecular weight heparin(LMWH) is the most commonly used anticoagulation drug for DVT prevention, but treatment with LMWH is invasive. Our aim is to compare the antithrombotic effect of dragon's blood, an oral botanical anticoagulant medicine approved by the Chinese FDA, with LMWH in patients undergoing hip fracture surgery and to explore the molecular mechanisms of anticoagulation treatment. Our study recruited patients and divided them into LMWH and dragon's blood treatment group. Coagulation index tests, Doppler ultrasound and m RNA sequencing were performed before and after anticoagulation therapy. There was no significant difference in postoperative DVT incidence between the two groups(23.1% versus 15.4%,P=0.694). D-dimer(D-D) and fibrinogen degradation product(FDP) showed significant reductions in both groups after anticoagulation treatments. We identified SLC4 A1, PROS1, PRKAR2 B and seven other genes as being differentially expressed during anticoagulation therapy in both groups. Genes correlated with coagulation indexes were also identified. Dragon's blood and LMWH showed similar effects on DVT and produced similar gene expression changes in patients undergoing hip fracture surgery, indicating that dragon's blood is a more convenient antithrombosis medicine(oral) than LMWH(hypodermic injection).     

Is oral microbiome of children able to maintain resistance and functional stability in response to short-term interference of ingesta?

Dear Editor, A series of studies had focused on the ecological stability of human microbiome (Lozupone et al.,2012;Faith et al.,2013;Moya and Ferrer,2016).Despite the continuous perturbation and the highly personalized composition within the human microbiome (Human Microbiome Project,2012),healthy adults stably maintain their microbial communities in terms of space and time (Faith et al.,2013;Moya and Ferrer,2016;Oh et al.,2016).This stability is proved to be critical for the well-being of human body (Lozupone et al.,2012).On the contrary,major shifts in microbial community composition are often related to diseases (Lynch and Pedersen,2016).     

Lower Emsian biostratigraphy and event stratigraphy of Ha Giang Province,northern Vietnam

A new species of rugose coral, Sanidophyllum dubium n. sp., and the typical Emsian (Early Devonian) rugose coral Xystriphylloides nobilis are described from the Mia Le Formation in northern Vietnam. The lower Emsian index conodonts ranging from the Polygnathus excavatus zone to the P. nothoperbonus zone are illustrated. The biostratigraphic correlation between northern Vietnam and South China shows that the Mia Le Formation in northern Vietnam is early Emsian in age, and its upper part can be correlated with the lower part of the Shizhou Member of the Yukiang Formation in Liujing, Guangxi and its equivalents in South China. Based on the study of the lower Emsian biostratigraphic sequence, the disappearance of Xystriphylloides nobilis fauna in the overlying bed of the uppermost Mia Le Formation and the extinction of the “tonkinensis fauna” (sensu lato) in the interval between the basal Si Phai Formation and the uppermost Mia Le Formation demonstrate the influence of the Yujiang Event in northern Vietnam.