绿盖粉孢牛肝菌中一个新的甾体糖苷

从绿盖粉孢牛肝菌（Tylopilus virens）中分离得到一个新的麦角甾烷型甾体糖苷,其化学结构通过波谱学方法鉴定为：（22E,24R）-麦角甾-7,22-二烯-5α,6β-二醇-3β-O-[3-（3-苯基丙酰氧基）]-β-D-葡萄吡喃糖苷,命名为tylopiloside（1）,同时,其苷元cerevisterol（2）也从该菌中分离得到。值得注意的是,这种糖片段上有芳环取代的烷酰氧基基团的麦角甾烷型甾体糖苷为真菌中首次报道。     

EFFECTS OF INCREASED TEMPERATURE AND CO2 ON PHOTOSYNTHESIS,GROWTH, AND ELEMENTAL RATIOS IN MARINE SYNECHOCOCCUS AND PROCHLOROCOCCUS (CYANOBACTERIA)1

Little is known about the combined impacts of future CO₂ and temperature increases on the growth and physiology of marine picocyanobacteria. We incubated Synechococcus and Prochlorococcus under present‐day (380 ppm) or predicted year‐2100 CO₂ levels (750 ppm), and under normal versus elevated temperatures (+4°C) in semicontinuous cultures. Increased temperature stimulated the cell division rates of Synechococcus but not Prochlorococcus. Doubled CO₂ combined with elevated temperature increased maximum chl a–normalized photosynthetic rates of Synechococcus four times relative to controls. Temperature also altered other photosynthetic parameters (α, Φ_max, E_k, and ) in Synechococcus, but these changes were not observed for Prochlorococcus. Both increased CO₂ and temperature raised the phycobilin and chl a content of Synechococcus, while only elevated temperature increased divinyl chl a in Prochlorococcus. Cellular carbon (C) and nitrogen (N) quotas, but not phosphorus (P) quotas, increased with elevated CO₂ in Synechococcus, leading to ～20% higher C:P and N:P ratios. In contrast, Prochlorococcus elemental composition remained unaffected by CO₂, but cell volume and elemental quotas doubled with increasing temperature while maintaining constant stoichiometry. Synechococcus showed a much greater response to CO₂ and temperature increases for most parameters measured, compared with Prochlorococcus. Our results suggest that global change could influence the dominance of Synechococcus and Prochlorococcus ecotypes, with likely effects on oligotrophic food‐web structure. However, individual picocyanobacteria strains may respond quite differently to future CO₂ and temperature increases, and caution is needed when generalizing their responses to global change in the ocean.     

水稻化感品种根分泌物中非酚酸类化感物质的鉴定与抑草活性

水稻化感品种能从根系分泌释放化感作用物质 ,长期以来 ,酚酸类物质被认为是水稻根分泌的主要化感物质 ,但这一结论常常被质疑。利用连续循环和直接树脂吸收两种方法采集典型的水稻化感品种 PI31 2 777幼苗的根分泌物 ,并用液相色谱 /质谱(L C/ MS)联用技术鉴定了根分泌物中的非酚酸类物质。结果显示 ,水稻 PI31 2 777幼苗根系能分泌释放 7-甲氧基羟基肟酸、羟基肟酸、3-异丙基 - 5 -乙酰氧基环己烯酮 - 1、5 ,7,4′-三羟基 - 3′,5′-二甲氧基黄酮、二萜内酯 A和二萜内酯 B6个非酚酸类化合物。经液相色谱 (HPL C)定量分析 ,这些化合物在水稻生长 1 0 d的根分泌物中的浓度为 5～ 1 9μmol/ L。进一步的生测结果显示 ,这些化合物在其释放的浓度范围能对稻田常见的稗草和异型莎草有抑制活性 ,尤其是这些化合物的等摩尔混合物的抑草活性增加 ,同时水稻根分泌物的抑草活性与土壤载体显著相关。表明羟基肟酸、环己烯酮、黄酮和二萜内酯四类非酚酸类物质是水稻的主要化感物质 ,这与近期愈来愈多的研究结果一致     

慢病毒介导的GFP-Hsp90αE47A基因在HepG2细胞表达及对细胞增殖性影响的研究

目的：建立真核细胞表达的GFP-Hsp90αE47A基因重组慢病毒载体三质粒包装细胞系统,并检测其对细胞增殖性的影响,为进一步研究HSP90分子伴侣功能奠定基础。方法：制备完整的重组慢病毒载体三质粒系统：转移质粒（Hsp90αE47A/psin-GFP）,包装质粒（ΔNRF）及包膜蛋白质粒（VSV-G）。磷酸钙法将三质粒共转染293T包装细胞,48h后收集病毒上清。将制备好的慢病毒颗粒感染HepG2细胞,在荧光显微镜下观察报告基因GFP的表达情况,Westernblot检测HepG2细胞GFP-Hsp90α表达。MTT法检测细胞增殖情况。结果：转染后的293T和感染后的HepG2细胞能观察到较强的绿色荧光,培养液上清病毒滴度约为3.0×103ifu/μl,HepG2细胞中有GFP-Hsp90α蛋白的表达。内源性Hsp90α表达无明显上升（为对照组的1.05±0.15倍,P〈0.05,t检验）,有明显外源性GFP-Hsp90αE47A蛋白的表达,为对照组内源性Hsp90α的0.68±0.12倍。外源性GFP-Hsp90αE47A蛋白的表达HepG2细胞增殖活性于第4d有明显抑制。（1.051±0.03vs1.349±0.05,P〈0.05,t检验）。结论：成功建立重组慢病毒载体的三质粒包装细胞系统,并将GFP-Hsp90αE47A基因在HepG2细胞中稳定表达,且并未引起细胞明显的热休克反应而导致的内源性Hsp90α增高;且能明显抑制细胞增殖,为后期Hsp90α分子伴侣功能进行研究奠定基础。     

Prediction of potential drivers connecting different dysfunctional levels in lung adenocarcinoma via a protein–protein interaction network

Lung cancer is a serious disease that threatens an affected individual's life. Its pathogenesis has not yet to be fully described, thereby impeding the development of effective treatments and preventive measures. “Cancer driver” theory considers that tumor initiation can be associated with a number of specific mutations in genes called cancer driver genes. Four omics levels, namely, (1) methylation, (2) microRNA, (3) mutation, and (4) mRNA levels, are utilized to cluster cancer driver genes. In this study, the known dysfunctional genes of these four levels were used to identify novel driver genes of lung adenocarcinoma, a subtype of lung cancer. These genes could contribute to the initiation and progression of lung adenocarcinoma in at least two levels. First, random walk with restart algorithm was performed on a protein–protein interaction (PPI) network constructed with PPI information in STRING by using known dysfunctional genes as seed nodes for each level, thereby yielding four groups of possible genes. Second, these genes were further evaluated in a test strategy to exclude false positives and select the most important ones. Finally, after conducting an intersection operation in any two groups of genes, we obtained several inferred driver genes that contributed to the initiation of lung adenocarcinoma in at least two omics levels. Several genes from these groups could be confirmed according to recently published studies. The inferred genes reported in this study were also different from those described in a previous study, suggesting that they can be used as essential supplementary data for investigations on the initiation of lung adenocarcinoma. This article is part of a Special Issue entitled: Accelerating Precision Medicine through Genetic and Genomic Big Data Analysis edited by Yudong Cai & Tao Huang.     

A maize ADP‐ribosylation factor ZmArf2 increases organ and seed size by promoting cell expansion in Arabidopsis

ADP‐ribosylation factors (ARFs) are small GTP‐binding proteins that regulate a wide variety of cell functions. Previously, we isolated a new ARF, ZmArf2, from maize (Zea mays). Sequence and expression characteristics indicated that ZmArf2 might play a critical role in the early stages of endosperm development. In this study, we investigated ZmArf2 function by analysis of its GTP‐binding activity and subcellular localization. We also over‐expressed ZmArf2 in Arabidopsis and measured organ and cell size and counted cell numbers. The expression levels of five organ size‐associated genes were also determined in 35S::ZmArf2 transgenic and wild‐type plants. Results showed that the recombinant ZmArf2 protein purified from Escherichia coli exhibited GTP‐binding activity. Subcellular localization revealed that ZmArf2 was localized in the cytoplasm and plasma membrane. ZmArf2 over‐expression in Arabidopsis showed that 35S::ZmArf2 transgenic plants were taller and had larger leaves and seeds compared to wild‐type plants, which resulted from cell expansions, not an increase in cell numbers. In addition, three cell expansion‐related genes, AtEXP3, AtEXP5 and AtEXP10, were upregulated in 35S::ZmArf2 transgenic lines, while the expression levels of AtGIF1 and AtGRF5, were unchanged. Collectively, our studies suggest that ZmArf2 has an active GTP‐binding function, and plays a crucial role in growth and development in Arabidopsis through cell expansion mediated by cell expansion genes.     

肺癌组织中岩藻糖化糖链结构免疫组化研究

Lewis X(Le~x)、唾液酸化的Lewis X(Sialyl Lewis X,SLe~x)和唾液酸化的双岩藻糖Lewis X(Sialyl Dimeric Lewis X,SDLe~x)是细胞表面外侧带α1,3岩藻糖的糖链结构。本文用免疫组化ABC法研究了肺癌原发灶、转移灶和癌旁组织中这三种抗原结构的表达。结果发现这三种抗原在肺癌细胞表面及胞浆中均有不同程度的表达,而在肺癌癌旁组织及正常肺组织中未见表达。有转移的肺癌和(或)低分化肺癌中这三种抗原结构的表达要明显高于未发生转移和高、中分化肺癌中相同抗原结构的表达。其中以SLe~x的表达与肺癌细胞的转移能力和分化程度关系最为密切。另外,肺癌浸润转移的淋巴结中也有Le~x、SLe~x的明显表达和SDLe~x的少量表达,而未被肺癌浸润转移的淋巴结中就没有它们的表达。     

Construction of a recombinant BHV-1 expressing the VP1 gene of foot and mouth disease virus and its immunogenicity in a rabbit model

Foot-and-mouth disease (FMD) and infectious bovine rhinotracheitis (IBR) are two important infectious diseases of cattle. Using bovine herpesvirus type 1 (BHV-1) as a gene delivery vector for development of live-viral vaccines has gained widespread interest. In this study, a recombinant BHV-1 was constructed by inserting the synthetic FMDV (O/China/99) VP1 gene in the the gE locus of BHV-1 genome under the control of immediately early gene promoter of human cytomegalovirus (phIE CMV) and bovine growth hormone polyadenylation (BGH polyA) signal. After homologous recombination and plaque purification, a recombinant virus named BHV-1/gE⁻/VP1 was acquired and identified. The immunogenicity was confirmed in a rabbit model by virus neutralization test and enzyme-linked immunosorbent assay (ELISA). The result indicated that the BHV-1/gE⁻/VP1 has the potential for being developed as a bivalent vaccine for FMD and IBR.     

猪Ⅱ型圆环病毒浙江株的分离及全基因组结构分析

用PCR方法对从浙江省猪场收集的、以淋巴结肿大和生长迟缓为特征的患猪腹股沟淋巴结进行PCV2检测.将检测为阳性的病料研磨、离心、过滤除菌后,接种PCV-free PK-15细胞进行病毒分离,分离获得3株病毒,命名为HZ0201、HZ0202、NB0301.PK-15细胞增殖所得病毒离心纯化后,在电镜下可观察到直径约为17～20nm,呈二十面体对称的病毒粒子.以组织和病毒的细胞DNA为模板进行PCV2的全基因扩增,测序结果显示,3株病毒分离物全基因序列均由1767bp组成,直接来自病料与细胞分离毒株的核苷酸同源性为100%.基因组内含有11个ORF.通过比较发现,分离毒株与PCV2参考株的同源性介于94.2%～99.7%之间;与PCV1参考株的同源性为77.2%～77.9%.     

铜尾矿废弃地土壤动物多样性特征

土壤动物的恢复、群落演替及其多样性对于铜尾矿废弃地的生态重建具有重要意义.为了解铜尾矿废弃地土壤动物群落多样性特征,在铜陵市铜尾矿区设置4个样地23采样点,共捕获土壤动物4622只个体,隶属5门10纲18目29类.结果表明,铜尾矿自然废弃地与其对照组土壤动物多样性差异明显,自然废弃地土壤动物丰富度指数d、大型土壤动物密度、中小型土壤动物密度、多样性指数H'和D·G指数均小于其对照组且存在显著差异.而复垦废弃地中小型土壤动物密度和D·G指数小于其对照组且存在显著差异,多样性指数H'大于其对照组且差异极显著,其他土壤动物群落指标与其对照组均无显著差异.相似系数q表明,外围林地间土壤动物群落相似性最大,其次是复垦废弃地与外围林地间,自然废弃地与其它3个样地间相似性最小.从垂直分层来看,复垦废弃地土壤动物表聚性强于自然废弃地,尾矿废弃地表聚性强于外围林地.灰色关联分析表明,铜尾矿区土壤理化性质与土壤动物群落结构指标关系密切,其中最重要的因素是土壤含水量和总钾含量,重金属全镉含量也不容忽视,植被因素和土壤全铜含量对土壤动物的影响相对较小.由此可见,土壤含水量、土壤基质的优劣、土壤有机质与营养元素的含量等因素限制了铜尾矿废弃地土壤动物的恢复与重建,而这些因素的改善主要归功于尾矿废弃地的土地复垦和作物种植.所以,尾矿废弃地的复垦与利用有利于土壤动物的恢复与重建.