Mechanism of adenylate kinase. Are the essential lysines essential?

Using site-specific mutagenesis, we have probed the structural and functional roles of lysine-21 and lysine-27 of adenylate kinase (AK) from chicken muscle expressed in Escherichia coli. The two residues were chosen since according to the nuclear magnetic resonance (NMR) model [Mildvan, A. S., & Fry, D. C. (1987) Adv. Enzymol. 58, 241-313], they are located near the alpha- and the gamma-phosphates, respectively, of adenosine 5'-triphosphate (ATP) in the AK-MgATP complex. In addition, a lysine residue (Lys-21 in the case of AK) along with a glycine-rich loop is considered "essential" in the catalysis of kinases and other nucleotide binding proteins. The Lys-27 to methionine (K27M) mutant showed only slight increases in kcat and Km, but a substantial increase (1.8 kcal/mol) in the free energy of unfolding, relative to the WT AK. For proper interpretation of the steady-state kinetic data, viscosity-dependent kinetics was used to show that the chemical step is partially rate-limiting in the catalysis of AK. Computer modeling suggested that the folded form of K27M could gain stability (relative to the wild type) via hydrophobic interactions of Met-27 with Val-179 and Phe-183 and/or formation of a charge-transfer complex between Met-27 and Phe-183. The latter was supported by an upfield shift of the methyl protons of Met-27 in 1H NMR. Other than this, the 1H NMR spectrum of K27M is very similar to that of WT, suggesting little perturbation in the global or even local conformations.(ABSTRACT TRUNCATED AT 250 WORDS)     

高浓度臭氧胁迫两种园林观赏草的逆境生理特征比较

以两种常见园林观赏草：白穗狼尾草（Pennisetum alopecuroides ‘White’）和拂子茅（Calamagrostis epigeios）作为试验材料,利用开顶箱（OTCs）模拟法,研究了不同高浓度臭氧（O₃,EO）：80 nmol/mol（EO-80）、120 nmol/mol（EO-120）和160 nmol/mol（EO-160）下两种观赏草叶片逆境生理特征的变化规律。结果表明：（1）短期（7 d）内随O₃浓度增加,白穗狼尾草叶绿素和类胡萝卜素含量较对照呈下降趋势,拂子茅较对照无显著变化。（2）在EO-120、EO-160下处理7 d时,两种观赏草叶片的净光合速率（P_n）和气孔导度（g_s）较对照显著下降,且白穗狼尾草下降的幅度均大于拂子茅。（3）不同高浓度O₃胁迫下,两种观赏草叶片丙二醛（MDA）含量较对照均有所升高,其中在EO-160下处理21 d时白穗狼尾草和拂子茅叶片MDA含量分别增加30.2%（P<0.05）和13.5%（P>0.05）,表明在EO-160浓度胁迫下白穗狼尾草受到的膜脂过氧化伤害大于拂子茅。（4）在EO-120和EO-160下处理21 d时,白穗狼尾草叶片可溶性蛋白含量较对照分别显著下降24.2%和43.1%,而拂子茅较对照分别下降19.0%和22.9%（P<0.05）。（5）与对照组相比,高浓度O₃下两种观赏草叶片的过氧化物酶（POD）活性随胁迫时间延长呈下降趋势,超氧化物歧化酶（SOD）活性呈先升后降。（6）综合以上生理特征比较及主成成分分析表明,佛子茅比白穗狼尾草更耐O₃,前者在O₃高污染地区可能会有更高的应用价值。     

茜草科二型花柱植物滇丁香传粉精确性研究

异型花柱是一种受遗传因素控制的花型多态性现象,其适应意义在于提高不同花型间传粉精确性,从而促进异交。为检验二型花柱植物滇丁香（Luculia pinceana）是如何促进异交并确定有效传粉者的类型,实验统计自然种群中长、短柱型的植株数量,测量花部特征,统计自然种群植株柱头上的型间花粉落置的数量和比例,比较型内、型间花粉的萌发率以及花粉管长度,比较不同人工授粉处理结实情况,观察传粉昆虫类型并测量虫体特征。结果表明（1）滇丁香自然居群中长、短柱型植株的数量没有显著性差异。长柱型的筒深、筒直径、开口直径、雄蕊长和柱头长均显著小于短柱型,而长柱型的叶片长和宽、雌蕊长、花药体积、花粉粒体积、柱头厚均显著大于短柱型。（2）自然种群植株柱头上型间花粉所占比例显著低于型内花粉的比例。（3）型间授粉的花粉萌发率以及花粉管长度均大于型内授粉和混合授粉。（4）型间授粉的结实率显著高于型内授粉的结实率,型内授粉具有一定的结实。（5）夜行性长喙条背天蛾（Cechenena lineosa）是滇丁香的有效传粉者,其吻长和滇丁香的花筒深相适应。本研究表明二型花柱植物滇丁香主要是通过与其花部特征相匹配的长喙天蛾实现有效的传粉,通过促进型间花粉的萌发和花粉管的伸长而有利于型间授粉结实,提高传粉精确性。     

温度对中华倒刺鲃不同生理生态性能的影响:驯化有益假说的验证

驯化有益假说(Beneficial acclimation hypothesis)认为生物表型的适应性变化会增强其在诱导这些变化产生的环境中的生理机能或适合度。然而,由于动物不同生理生态性能对环境驯化的响应可能不一致,那么,测试表型性状的选择对驯化有益假说的验证就尤为关键。为此,整合表征动物生存适合度的不同生理生态性能并探究其对环境驯化的响应模式就十分必要。以我国长江中上游广泛分布的中华倒刺鲃(Spinibarbus sinensis)为对象,考察了驯化温度(18℃、28℃)和测试温度(18℃、28℃)及其交互作用对该物种有氧运动能力和无氧运动能力的影响,为驯化有益假说等相关假说的验证提供参考。研究发现,中华倒刺鲃不同生理生态性能对温度驯化的响应存在差异:(1)驯化温度对表征中华倒刺鲃无氧运动能力的快速启动游泳无显著影响(除最大加速度外)(P>0.05),研究数据倾向于支持无益假说(No-advantage hypothesis);(2)驯化温度对表征中华倒刺鲃有氧运动能力的临界游泳速度(Critical swimming speed,Ucrit)和最大代谢率(Maximum metabolic rate, MMR)影响显著(P<0.05),18℃驯化-18℃测试下的Ucrit和MMR均优于28℃驯化-18℃测试下的Ucrit和MMR,结果部分支持驯化有益假说和冷有益假说(Cooler is better hypothesis);(3)驯化温度、测试温度、游泳速度对中华倒刺鲃的运动代谢率(Active metabolic rate,MO2)和单位距离能量消耗(The energetic cost of transport, COT)影响显著(P<0.05)。值得关注的是,当游泳速度小于30 cm/s时,驯化温度对MO2和COT无影响,结果支持无益假说;而当游泳速度大于30 cm/s时,在特定的流速下经过28℃驯化的中华倒刺鲃无论在28℃还是18℃的测试环境下MO2和COT均较低,结果倾向于支持热有益假说(Warmer is better hypothesis)。研究结果提示:驯化有益假说并不具有普遍性,热驯化相关假说的验证不仅受表型性状选择的影响,而且还与测试的环境选择压力有关。     

Tsp2 Facilitates Tumor-associated Fibroblasts Formation and Promotes Tumor Progression in Retroperitoneal Liposarcoma

Retroperitoneal liposarcoma (RLPS) is the most common subtype of retroperitoneal soft tissue sarcoma, characterized by a high recurrence rate and insensitivity to radiotherapy and chemotherapy. The function of tumor microenvironmental components, especially tumor-associated fibroblasts (TAFs), remains unclear in RLPS. The crosstalk between tumor cells and stromal cells should be clarified for therapy target discovery in RLPS. In this study, we demonstrated that TAFs from dedifferentiated liposarcoma (DDLPS) could attract LPS cells and promote their proliferation and migration. However, although α-SMA is positively expressed in RLPS, its expression does not indicate prognosis. By screening differentially expressed genes, performing Oncomine visualization, TCGA gene expression correlation analysis and qPCR verification, we determined that thrombospondin-2 (THBS2) gene expression was related to TAFs. The expression of Tsp2 protein, which was encoded by THBS2, was correlated with α-SMA expression, and it was an independent predictive factor for disease-free survival and recurrence-free survival in patients with RLPS. In vitro, Tsp2 facilitated the transformation of bone marrow-derived fibroblasts (BMFs) to TAFs and promoted the malignant biological behaviors of LPS cells by activating the MAPK/MEK/ERK pathway. Therefore, suppression of Tsp2 is expected to be a promising treatment method for RLPS patients.     

高寒草甸物种多样性对藏系牧羊放牧行为的影响

为探究草原植物物种多样性对家畜放牧行为的影响及其机制,在青藏高原高寒草甸开展藏系牧羊轮牧试验,调查植被物种多样性,观察藏系牧羊采食速率、觅食速率和采食时间,并计算藏系牧羊日采食量。结果表明：两年间,植物物种丰富度与藏系牧羊采食速率呈显著正相关关系（P<0.05）;觅食速率、采食时间和日采食量对放牧率响应敏感（P<0.05）,呈夏秋增冬春减的趋势。植物Shannon-Wiener指数与藏系牧羊的采食时间显著负相关（P<0.05）;在暖季或8羊/hm²放牧率下植物Shannon-Wiener指数与藏系牧羊日采食量呈显著正相关（P<0.05）。Pilelou均匀度指数与藏系牧羊采食速率和采食时间显著负相关（P<0.05）;在暖季或8羊/hm²放牧率下Pilelou均匀度指数与藏系牧羊日采食量呈显著负相关（P<0.05）。植物物种丰富度对藏系牧羊放牧行为贡献较大,且放牧藏系牧羊的采食速率和采食时间比觅食速率和日采食量对植物物种丰富度响应更敏感,以用植物物种丰富度为自变量可以更好预测藏系牧羊放牧行为。放牧管理通过影响植被物种多样性从而进一步影响了藏系牧羊放牧行为。放牧行为不仅是评价草地营养价值和家畜生产力的关键指标,也是草地健康管理的基础。因此,明确草原植物物种多样性-藏系牧羊放牧行为的互作机制有助于更好的提高藏系牧羊地生产力,维护草原生态健康。     

粤北南岭大宝山矿流域山水林田湖草修复阻力与优先级分析

遵循“防源、控流、治汇”理念,以粤北南岭大宝山矿区作为风险源,以所在流域为研究区,分析研究区主要阻力因素,采用最小累积阻力模型建立区域生态阻力面;利用Jenks自然断点法,分析生态修复优先级,提出分区治理重点和对策。研究结果表明：研究区综合阻力系数处于9-32之间,各评价指标的阻力面空间分布格局相似,其阻力值呈现出东南部大,西北部小的空间格局;长期的矿业开采污染了流域生态环境,且距离矿区越近的区域生态修复的优先性越高。将研究区分为4个优先级区,各区修复优先性依次为Ⅰ区 > Ⅱ区 > Ⅲ区 > Ⅳ区。Ⅰ区重点在于治水,提高pH、降低重金属有效态含量和增加地表植被覆盖度。Ⅱ区重点在于河流治理与治土,确保污染减排,增强拦泥库的废水调节。Ⅲ区、Ⅳ区核心在治土,逐步改善土壤条件。研究结果为修复项目在时空尺度上落地和科学治理提供科学依据。     

乳粉中嗜热菌污染研究进展

嗜热菌是乳粉中的常见污染菌,是影响乳粉品质的一个重要因素。本文综述乳粉中嗜热菌的种类、污染源对乳品工业的危害及其控制手段的研究进展,为国内相关领域研究提供参考。     

资源型城市土地利用转型及其对生境质量的影响——以乌海市为例

资源型城市前期发展导致了生境丧失或退化,实现高质量转型需要深入理解城市转型与生态环境质量之间的关系,土地利用转型特征及其对生境质量的影响规律研究为此提供依据与支撑。以资源型城市--乌海市为研究区,通过地学信息图谱和InVEST模型探究2005-2018年乌海市土地利用转型特征、生境质量时空变化及土地利用转型对生境质量的影响。结果表明：（1）2005-2018年乌海市土地利用变化趋势发生改变,土地利用转型明显,土地利用变化图谱单元数量逐渐增加78.14%,分布范围逐渐广泛。主要表现为草地与建设用地、采矿用地之间的相互转化,第一阶段（2005-2015年）草地大面积减少,建设用地和采矿用地大面积增加,第二阶段（2015-2018年）趋势相反。（2）乌海市生境质量变化呈现先强退化后弱提升趋势。2005-2015年乌海市18.75%的区域生境质量退化,提升面积较小;2015-2018年生境质量提升面积略大于退化面积。（3）2005-2015年草地向采矿用地、建设用地转化是区域生境质量降低的主要原因,2015-2018年区域生境质量提升的主导因素是采矿用地和建设用地向草地转化。研究结果揭示了资源型城市土地利用转型过程中生境质量的响应规律,可为资源型城市土地利用转型决策提供参考。     

CD36 aggravates podocyte injury by activating NLRP3 inflammasome and inhibiting autophagy in lupus nephritis

A major cause of proteinuria in lupus nephritis (LN) is podocyte injury, and determining potential therapeutic targets to prevent podocyte injury is important from a clinical perspective in the treatment of LN. CD36 is involved in podocyte injury in several glomerulopathies and was reported to be a vital candidate gene in LN. Here, we determined the role of CD36 in the podocyte injury of LN and the underlying mechanisms. We observed that CD36 and NLRP3 (NLR family pyrin domain containing 3) were upregulated in the podocytes of lupus nephritis patients and MRL/lpr mice with renal impairment. In vitro, CD36, NLRP3 inflammasome, and autophagy were elevated accompanied with increased podocyte injury stimulated by IgG extracted from lupus nephritis patients compared that from healthy donors. Knocking out CD36 with the CRISPR/cas9 system decreased the NLRP3 inflammasome levels, increased the autophagy levels and alleviated podocyte injury. By enhancing autophagy, NLRP3 inflammasome was decreased and podocyte injury was alleviated. These results demonstrated that, in lupus nephritis, CD36 promoted podocyte injury by activating NLRP3 inflammasome and inhibiting autophagy by enhancing which could decrease NLRP3 inflammasome and alleviate podocyte injury.Subject terms: Mechanisms of disease, Inflammasome, Lupus nephritis, Autophagy