Mycorrhizal suppression and phosphorus addition influence the stability of plant community composition and function in a temperate steppe

Nutrient enrichment can reduce ecosystem stability, typically measured as temporal stability of a single function, e.g. plant productivity. Moreover, nutrient enrichment can alter plant–soil interactions (e.g. mycorrhizal symbiosis) that determine plant community composition and productivity. Thus, it is likely that nutrient enrichment and interactions between plants and their soil communities co-determine the stability in plant community composition and productivity. Yet our understanding as to how nutrient enrichment affects multiple facets of ecosystem stability, such as functional and compositional stability, and the role of above–belowground interactions are still lacking. We tested how mycorrhizal suppression and phosphorus (P) addition influenced multiple facets of ecosystem stability in a three-year field study in a temperate steppe. Here we focused on the functional and compositional stability of plant community; functional stability is the temporal community variance in primary productivity; compositional stability is represented by compositional resistance, turnover, species extinction and invasion. Community variance was partitioned into population variance defined as community productivity weighted average of the species temporal variance in performance, and species synchrony defined as the degree of temporal positive covariation among species. Compared to treatments with mycorrhizal suppression, the intact AM fungal communities reduced community variance in primary productivity by reducing species synchrony at high levels of P addition. Species synchrony and population variance were linearly associated with community variance with the intact AM fungal communities, while these relationships were decoupled or weakened by mycorrhizal suppression. The intact AM fungal communities promoted the compositional resistance of plant communities by reducing compositional turnover, but this effect was suppressed by P addition. P addition increased the number of species extinctions and thus promoted compositional turnover. Our study shows P addition and AM fungal communities can jointly and independently modify the various components of ecosystem stability in terms of plant community productivity and composition.     

GII.26型诺如病毒的组织血型抗原结合特征

诺如病毒(Noroviruses,NoVs)是引起全球急性胃肠炎的常见病原.组织血型抗原(Histo-blood groups antigens,HBGAs)是NoVs黏附因子(受体),能促进病毒感染宿主细胞.NoVs主要衣壳蛋白突出(Protruding,P)区是与HBGAs结合的关键结构域.本研究构建了非流行毒株GII.26型NoVsP区的原核表达重组质粒,以谷胱甘肽巯基转移酶(Glutathione s-transferase,GST)亲和层析纯化P蛋白,人鼻病毒的3C蛋白酶去掉GST标签,通过酶联免疫吸附实验探索P蛋白与HBGAs相互作用的特点,借助同源结构模拟以及结构重叠分析其与相应糖分子之间可能存在的对接位点.结果 表明,P蛋白可与包括A型、B型、AB型、O型和非分泌型的215种唾液中的大部分发生结合,但只与19种寡糖中的H双糖结合;模拟的GII.26P单体的空间构象与GII.17类似,可通过糖结合位点的5个氨基酸与H双糖特异性结合.本研究阐明了GII.26 P蛋白与HBGAs的结合特征及潜在分子机制,为进一步揭示GII.26 NoVs可能的流行趋势及研发潜在抗病毒药物奠定一定的基础.     

喀什边境口岸陆运卡车及集装箱污染的新冠病毒基因特征分析

新疆维吾尔自治区喀什地区作为我国与中亚和欧洲的重要陆路货运口岸,来往货物运输频繁,引入新型冠状病毒(SARS-CoV-2)风险大,对我国新型冠状病毒肺炎(COVID-19)疫情防控造成压力.2020年11月我国新疆维吾尔自治区喀什地区发生输入SARS-CoV-2导致的本土聚集性COVID-19疫情.为明确货物运输载体携带SARS-CoV-2的基因特征以及边境快速物流系统作为SARS-CoV-2传播载体的可能性,本研究对2020年11月6日-2020年11月10日期间在喀什边境口岸货运卡车及运输的集装箱采集的35份SARS-CoV-2核酸阳性样本进行SARS-CoV-2全基因组序列测定和比对分析.结果 显示,35份样本ORFlab基因Ct值的中位数(最小值～最大值)为37.64(28.91～39.81),N基因Ct值的中位数(最小值～最大值)为36.50(26.35～39.30),Reads数匹配率的中位数(最小值～最大值)为51.95％(0.86％～99.31％),病毒载量较低;35份样本中基因组覆盖度达到70％以上的共计18份.基于Pango命名法,18条SARS-CoV-2基因组序列分别属于B.1、B.1.1、B.1.9、B.1.1.220、B.1.153和B.1.465共6个不同的基因型,其中3个基因型(B.1、B.1.1和B.1.153)在喀什边境接壤或邻近的四个国家同期采集的病例样本中也有发现.核苷酸突变位点和系统进化树分析显示,同一个地点采集的样本病毒基因组相似程度高;18条序列中的4条与喀什COVID-19疫情毒株代表序列处在同一个进化分支;其中1条序列与喀什COVID-19疫情毒株基因组存在1个或2个核苷酸突变位点差异,高度同源.本研究证实喀什COVID-19疫情期间边境货运卡车和集装箱存在境外多种基因型病毒的污染,其中存在喀什COVID-19疫情毒株的祖父代病毒,高度提示边境快速物流系统卡车及集装箱作为载体携带SARS-CoV-2病毒入境造成了本土疫情,这些数据为我国边境口岸地区的新冠防控策略制定及后续疫情溯源提供了关键的参考依据.     

葡萄VvIQD10果形相关基因定位及其互作研究

以葡萄6个不同果形品种盛花期花序为材料,通过荧光定量PCR方法分析比较葡萄IQ67结构域(IQ67 domain, IQD)基因家族成员VvIQD10的表达;从椭圆形葡萄品种‘天山’中克隆出VvIQD10基因编码区序列,对其进行生物信息学分析,采用亚细胞定位瞬时表达载体转化烟草的方法研究VvIQD10蛋白在细胞中的分布情况,并通过酵母双杂交实验和双分子荧光互补试验进行蛋白互作研究。结果表明:(1)VvIQD10基因在长果形葡萄品种中的表达量高于近圆形葡萄品种。(2)VvIQD10基因开放阅读框长度为1 401 bp,编码466个氨基酸。(3)VvIQD10蛋白为不稳定亲水性蛋白,无信号肽和跨膜区,但含保守的IQ67结构域,主要结构为α螺旋和随机卷曲,与猕猴桃IQD家族成员(PSS09955.1)亲缘关系最为接近。(4)VvIQD10蛋白主要定位于微管和质膜,并且直接与细胞骨架组织相关蛋白——钙调素类蛋白(VvCML)相互作用。研究认为,VvIQD10基因可能参与葡萄果形调控,葡萄VvCML蛋白从胞质到微管的募集依赖于VvIQD10,推测VvIQD10蛋白可能通过和钙调素类蛋白相结合来调控细胞骨架运动,进而参与葡萄果实形状的变化。     

呼吸道合胞病毒IgM抗体AlphaLISA快速检测方法的建立

呼吸道合胞病毒(Respiratory syncytial virus,RSV)属于副粘液病毒科,是一种下呼吸道感染最主要的RNA病毒.呼吸道合胞病毒感染是引起全球婴幼儿高致死率的呼吸道感染病原,仅次于疟疾,但用于检测RSV感染的选择相对较少.本文通过抗原抗体结合原理,建立呼吸道合胞病毒(RSV)IgM抗体AlphaLISA快速检测方法.小鼠抗人IgM单克隆抗体偶联的受体微球与临床血清样品中RSV特异性IgM抗体结合,RSV特异性IgM抗体再与生物素标记的RSV抗原结合,生物素连接偶联链霉亲和素的供体微球;受体微球和供体微球的距离被拉近小于200nm,680nm荧光激发供体微球生成单线态氧,扩散给受体微球,发射波长为520～620nm的荧光,荧光强度与血清中RSV特异性IgM抗体呈正比.结果显示,该方法批内变异系数与批间变异系数均小于10％,不与其他呼吸道病原体发生交叉反应,与间接免疫荧光法具有较好的一致性,总符合率达83.33％.该方法具有微量检测、快速省时、操作简便等优势,可快速检测RSV的IgM抗体,为早期确诊RSV感染提供高效可行方案.     

Evolution and diversity of axon guidance Robo receptor family genes

The diversity of axon guidance (AG) receptors reflects gains in complexity of the animal nervous system during evolution. Members of the Roundabout (Robo) family of receptors interact with Slit proteins and play important roles in many developmental processes, including AG and neural crest cell migration. There are four members of the Robo gene family. However, the evolutionary history of Robo family genes remain obscure. We analyzed the distribution of Robo family members in metazoan species ranging in complexity from hydras to humans. We undertook a phylogenetic analysis in metazoans, synteny analysis, and ancestral chromosome mapping in vertebrates, and detected selection pressure and functional divergence among four mammalian Robo paralogs. Based on our analysis, we proposed that the ancestral Robo gene could have undergone a tandem duplication in the vertebrate ancestor; then one round of whole genome duplication events occurred before the divergence of ancestral lamprey and gnathostome, generating four paralogs in early vertebrates. Robo4 paralog underwent segmental loss in the following evolutionary process. Our results showed that Robo3 paralog is under more powerful purifying selection pressure compared with other three paralogs, which could correlate with its unique expression pattern and function. Furthermore, we found four sites under positive selection pressure on the Ig1‐2 domains of Robo4 that might interfere with its binding to Slits ligand. Diverge analysis at the amino acid level showed that Robo4 paralog have relatively greater functional diversifications than other Robo paralogs. This coincides with the fact that Robo4 predominantly functions in vascular endothelial cells but not the nervous system.     

MA诱导方案与DA诱导方案对老年急性髓系白血病患者血清炎症因子及复发率的影响

目的:探讨米托蒽醌联合阿糖胞苷(MA方案)与柔红霉素联合阿糖胞苷(DA方案)对老年急性髓系白血病(AML)患者血清炎症因子及复发率的影响。方法:选取2015年1月~2018年1月期间深圳市人民医院收治的老年AML患者129例,根据治疗方案的不同将患者分为DA组(n=64,DA方案治疗)和MA组(n=65,MA方案治疗),比较两组患者疗效、炎症因子、不良反应及复发情况。结果:MA组治疗后的临床总有效率高于DA组(P<0.05)。两组患者治疗后血清干扰素γ诱导蛋白-10(IP-10)、巨噬细胞炎症蛋白-1α(MIP-1α)及可溶性细胞间黏附分子1(sICAM-1)水平均降低,且MA组低于DA组(P<0.05)。MA组完全缓解患者中累计复发率低于DA组(P<0.05)。两组不良反应发生率比较无差异(P>0.05)。结论:与DA诱导方案相比,MA诱导方案治疗老年AML患者,可有效改善炎症因子水平,减少复发,且用药安全性较好。     

黄色肉芽肿性胆囊炎与胆囊癌的临床特征分析及螺旋CT检查的鉴别诊断价值

目的:研究黄色肉芽肿性胆囊炎(XGC)与胆囊癌的临床特征分析及螺旋CT检查的鉴别诊断价值。方法:选取从2018年1月-2020年12月于我院接受腹部螺旋CT检查的41例XGC患者纳入研究,记作XGC组,另取同期医院接受腹部螺旋CT检查的45例胆囊癌患者作为胆囊癌组。分析两组临床特征、螺旋CT检查结果表现,比较两组血清血管内皮生长因子(VEGF)、糖类抗原19-9(CA19-9)水平的差异。并以病理检查为金标准,分析螺旋CT检查用作XGC与胆囊癌鉴别诊断的价值。结果:XGC组患者食欲下降、体重下降人数占比均低于胆囊癌组(均P<0.05);而两组腹痛、黄疸、发热、白细胞(WBC)升高、谷丙转氨酶(ALT)升高、谷草转氨酶(AST)升高、胆囊扩张发生率对比差异无统计学意义(均P>0.05)。XGC组囊壁增厚均匀、壁内有低密度结节人数占比均低于胆囊癌组,而有肿大淋巴结人数占比高于胆囊癌组(均P<0.05)。螺旋CT检查诊断XGC的灵敏度、特异度、准确度分别为95.12(39/41)、95.56%(43/45)、95.35%(82/86)。XGC组患者血清VEGF、CA19-9水平均低于胆囊癌组,差异均有统计学意义(均P<0.05)。结论:XGC患者食欲下降、体重下降发生率低于胆囊癌患者,螺旋CT检查鉴别诊断XGC与胆囊癌的价值较高,值得临床关注。     

Genomes of 12 fig wasps provide insights into the adaptation of pollinators to fig syconia

Figs and fig pollinators are one of the few classic textbook examples of obligate pollination mutualism. The specific dependence of fig pollinators on the relatively safe living environment with sufficient food sources in the enclosed fig syconia implies that they are vulnerable to habitat changes. However, there is still no extensive genomic evidence to reveal the evolutionary footprint of this long-term mutually beneficial symbiosis in fig pollinators. In fig syconia, there are also non-pollinator species. The non-pollinator species differ in their evolutionary and life histories from pollinators. We conducted comparative analyses on 11 newly sequenced fig wasp genomes and one previously published genome. The pollinators colonized the figs approximately 66.9 million years ago, consistent with the origin of host figs. Compared with nonpollinators, many more genes in pollinators were subject to relaxed selection. Seven genes were absent in pollinators in response to environmental stress and immune activation. Pollinators had more streamlined gene repertoires in the innate immune system, chemosensory toolbox, and detoxification system. Our results provide genomic evidence for the differentiation between pollinators and nonpollinators. The data suggest that owing to the long-term adaptation to the fig, some genes related to functions no longer required are absent in pollinators.