Phytase enzymology, applications, and biotechnology

Phytases are phosphohydrolases that initiate the step-wise removal of phosphate from phytate. These enzymes have been widely used in animal feeding to improve phosphorus nutrition and to reduce phosphorus pollution of animal waste. The potential of phytases in improving human nutrition of essential trace minerals in plant-derived foods is being explored. This review covers the basic biochemistry and application of phytases, and emphasizes the emerging biotechnology used for developing new effective phytases with improved properties.     

Impacts of glutathione peroxidase-1 knockout on the protection by injected selenium against the pro-oxidant-induced liver aponecrosis and signaling in selenium-deficient mice

Previous research has suggested that repletion of cellular glutathione peroxidase (GPX1) activity by a single injection of Se was dissociated from the Se protection against the pro-oxidant-induced liver necrosis in Se-deficient rodents. Using the GPX1 knockout (GPX1-/-) mice, TUNEL assay, and apoptosis gene expression microarray, we have demonstrated strikingly different impacts of GPX1 knockout on hepatotoxicity and the related signaling induced by an intraperitoneal injection of 12.5 mg paraquat/kg body weight (b.wt.). In both Se-deficient GPX1-/- and wild-type (WT) mice, the paraquat did not induce typical liver necrosis, rather aponecrosis or necrapoptosis, a syncretic process of cell death sharing characteristics of both apoptosis and necrosis. The severity of liver aponecrosis and the associated mortality were reduced to a much greater extent by an injection of Se (ip, 50 microg/kg b.wt. as Na2SeO3) prior to paraquat stress in the WT mice, compared with the GPX1-/- mice. The induced liver aponecrosis seemed to be more apoptotic in the GPX1-/- mice but more necrotic in the WT mice. The paraquat-mediated gene or protein expression of proapoptotic Bax, Bcl-w, and Bcl-X(S), cell survival/death factors GADD45, MDM2, c-Myc, and caspase-3 was upregulated, but that of antiapoptotic Bcl-2 was downregulated in the GPX1-/- mice vs. the WT mice. Overall, these differences between the two groups of mice were related to a low level of liver GPX1 activity in the WT mice that represented < 4% of the normal physiological level. Therefore, the low level of GPX1 activity in the Se-deficient mice can exert a potent role in defending against liver aponecrosis induced by moderate oxidative stress.     

Histidine-114 at subsites E and F can explain the characteristic enzymatic activity of guinea hen egg-white lysozyme

The courses of the reaction catalyzed by guinea hen egg-white lysozyme (GHL), in which Asn113 and Arg114 at subsites E and F in hen egg-white lysozyme (HEL) are replaced by Lys and His, respectively, was studied with the substrate N-acetylglucosamine pentamer, (GlcNAc)5. Although GHL was found to retain the main-chain folding similar to HEL as judged from CD spectroscopy, the courses of GHL showed increased production of (GlcNAc)4 and reduced production of (GlcNAc)2 when compared with HEL. To identify critical residue(s) involved in the alteration in the courses of GHL, two mutant enzymes as to subsites E and F in HEL, N113K and R114H, were prepared by site-directed mutagenesis. Kinetic analysis of these mutants revealed that the mutation of Asn113 to Lys had little effect on the courses of HEL, while the Arg114 to His mutation completely reproduced the courses of GHL, demonstrating that His114 in GHL is the key residue responsible for the characteristic courses of GHL. Computer simulation of the reaction courses of the R114H mutant revealed that this substitution decreased not only the binding free energies for subsites E and F, but also the rate constant of transglycosylation. The Arg residue at position 114 may play an important role in the transglycosylation activity of HEL.     

Radiation hybrid comparative mapping between human chromosome 17 and porcine chromosome 12 demonstrates conservation of gene order

A comparative study of human chromosome 17 (HSA17) and pig chromosome 12 (SSC12) was conducted using both somatic cell hybrid panel (SCHP) and radiation hybrid (RH) panel analysis. Sequences from an expressed sequence tag (EST) project in pig reproduction were examined and six genes and ESTs originally believed to map to HSA17 were selected for this study. The genes/ESTs were TATA box binding protein-associated factor (TAF2N/RBP56), alpha-2-plasmin inhibitor (SERPINF2/PLI), H3 histone family 3B (H3F3B), aminopeptidase puromycin sensitive (NPEPPS), an expressed sequence tag (ESTMI015) and P311 protein (P311). The SCHP analysis mapped five genes/ESTs (TAF2N, H3F3B, SERPINF2, NPEPPS and ESTMI015) to SSC12q11-q15 and SSC12p11-p15 with 100% concordance, and assigned P311 to SSC2 (1/2q24)-q29 with 100% concordance. Radiation hybrid analysis of all six genes confirmed the SCHP mapping results, with average retention frequency of 25%. Recent human sequence data demonstrated that P311 is actually located on HSA5q. As HSA5q and SSC2q show conserved syntenic regions predicted from bi-directional painting, our P311 mapping data is consistent with these results. An expanded comparative SSC12 RH map integrating the five new type I markers and 23 previously mapped loci was established using a LOD score threshold of 4.8. The gene order of the five genes/ESTs on the SSC12 framework RH map (H3F3B-ESTMI015-NPEPPS-TAF2N-SERPINF2) is identical to the HSA17 GB4 map but with inversion of the map as conventionally drawn.     

中国棉铃虫核型多角体病毒DNA聚合酶基因的克隆和序列分析

应用谷实夜蛾核型多角体病毒（ＨｚＳＮＰＶ）ＤＮＡ聚合酶基因ＨｉｎｄⅢ／ＰｓｔⅠ３５９６ｂｐ片段作探针,经Ｓｏｕｒｔｈｅｒｎｂｌｏｔ杂交,克隆了中国棉铃虫核型多角体病毒（ＨａＳＮＰＶ）完整的ＤＮＡ聚合酶基因,大小约为３．４ｋｂ。限制性内切酶分析表明,ＨａＳＮＰＶＤＮＡ聚合酶基因限制性内切酶图谱与ＨｚＳＮＰＶ相似。用双脱氧链终止法测定该基因部分核苷酸序列（８０５ｂｐ）,推导出编码区２０６ａ。序列同源性比较显示,ＨａＳＮＰＶＤＮＡ聚合酶与ＨｚＳＮＰＶ之间具有高度的同源性;与ＬｄＭＮＰＶ、ＡｃＭＮＰＶ、ＢｍＳＮＰＶ、ＣｆＭＮＰＶ和ＯｐＭＮＰＶ也具有一定的同源性     

蚯蚓体内一种纤溶酶原激活剂(e-PA)的部分性质研究

从赤子爱胜蚓（Ｅｉｓｅｎｉａｆａｅｔｉｄａ）中纯化出的一种纤溶酶原激活剂（ｅ－ＰＡ）在纤维蛋白平板上可表现出三种活性,分别记为：ＣＦＰｇ,ｕＣＦＰｇ和ｕＣＦ．为更好了解各种活性与ｅ－ＰＡ的纤溶能力的关系,考察了在ＳＤＳ和不同抑制剂存在下各种活性的变化．结果表明,ＳＤＳ可以增强ＣＦＰｇ活性且使得ｅ－ＰＡ变得对一些抑制剂更敏感;ｌｅｕｐｅｐｔｉｎ,ｃｈｙｍｏｓｔａｔｉｎ,ｐｅｐｓｔａｔｉｎ,ａｐｒｏ－ｔｉｎｉｎ,ｐｈｅｎｙｌｍｅｔｈｙｌｓｕｌｆｏｎｙｌｆｌｕｏｒｉｄｅ（ＰＭＳＦ）和ｄｉｔｈｉｏｔｈｒｅｉｔｏｌ（ＤＴＴ）对ｕＣＦ没有影响;ｐｅｐ－ｓｔａｔｉｎ能增强ＣＦＰｇ和ｕＣＦＰｇ活性,Ｅ－６４（一种巯基抑制剂）能增强ｕＣＦＰｇ和ｕＣＦ活性．这些现象说明不能简单将ｅ－ＰＡ归结为丝氨酸蛋白酶或巯基蛋白酶．此外又以纤溶酶原为底物,分析了ｅ－ＰＡ在体外降解天然蛋白质的肽键特异性,结果表明：ｅ－ＰＡ可以切割碱性氨基酸,小的中性氨基酸及Ｍｅｔ的羧基端,同时ｅ－ＰＡ确能将纤溶酶原切割为纤溶酶;这一结论为ｅ－ＰＡ有可能成为新型溶栓药物提供了生化基础．     

蚯蚓体内一种纤溶酶原激活剂(e-PA)对ATEE的降解

赤子爱胜蚓（Ｅｉｓｅｎｉａｆｅｔｉｄａ）体内的一种纤溶酶原激活剂（ｅ－ＰＡ）能够降解人工合成底物Ｎ－乙酰－Ｌ－酪氨酸乙酯（ＡＴＥＥ）,该降解反应的最适ｐＨ为８．５,而且在０．２ｍｏｌ／ＬＮａ２ＨＰＯ４中的活性要强于在０．０５ｍｏｌ／ＬＴｒｉｓ－ＨＣｌ（ｐＨ８．５）中．分别测定了ｅ－ＰＡ的大小亚基及全酶在０．２ｍｏｌ／ＬＮａ２ＨＰＯ４与０．０５ｍｏｌ／ＬＴｒｉｓ－ＨＣｌ（ｐＨ８．５）两种体系中的Ｋｍ和Ｋｃａｔ．结果表明,在０．２ｍｏｌ／ＬＮａ２ＨＰＯ４中,全酶的ＡＴＥＥ活性远远高于大小亚基单独的ＡＴＥＥ活性,而在０．０５ｍｏｌ／ＬＴｒｉｓ－ＨＣｌ（ｐＨ８．５）中则没有这种现象．从蛋白质结构的角度对这一结果作了解释．用不同抑制剂和ｅ－ＰＡ作用,结果表明,ｐｅｐｓｔａｔｉｎ,Ｅ－６４和ＥＤＴＡ对ｅ－ＰＡ的ＡＴＥＥ活性都有不同程度的抑制,这一点与ｅ－ＰＡ的ＢＡＥＥ活性不同．     

Nitric oxide inhibits larval settlement in Amphibalanus amphitrite cyprids by repressing muscle locomotion and molting

Nitric oxide (NO) is a universal signaling molecule and plays a negative role in the metamorphosis of many biphasic organisms. Recently, the NO/cGMP (cyclic guanosine monophosphate) signaling pathway was reported to repress larval settlement in the barnacle Amphibalanus amphitrite. To understand the underlying molecular mechanism, we analyzed changes in the proteome of A. amphitrite cyprids in response to different concentrations of the NO donor sodium nitroprusside (SNP; 62.5, 250, and 1000 μM) using a label‐free proteomics method. Compared with the control, the expression of 106 proteins differed in all three treatments. These differentially expressed proteins were assigned to 13 pathways based on KEGG pathway enrichment analysis. SNP treatment stimulated the expression of heat shock proteins and arginine kinase, which are functionally related to NO synthases, increased the expression levels of glutathione transferases for detoxification, and activated the iron‐mediated fatty acid degradation pathway and the citrate cycle through ferritin. Moreover, NO repressed the level of myosins and cuticular proteins, which indicated that NO might inhibit larval settlement in A. amphitrite by modulating the process of muscle locomotion and molting.