基于残差注意力网络模型的浮游植物识别

浮游植物作为水生态系统中最重要的生物组成部分之一,对水环境敏感,在水环境监测中得到了广泛的关注。然而水生环境复杂多样,准确高效地识别浮游植物是监测工作中的一大挑战。当前浮游植物识别方法可分为经典形态学分类、分子标记和人工智能图像识别三类。前两种方法已被广泛采用,但费时费力,不利于监测机构的大规模应用和推广。同样,利用图像进行自动化分类难以在高准确率与高效率上达到平衡。深度学习技术的发展为此提供了新思路。本文提出一种新的深度卷积神经网络RAN-11。该网络以残差注意力网络Attention-56和Attention-92为基础,凭借通道对齐融合主干上的底层特征与顶层特征,通过调整注意力模块和残差快个数以精简结构,并引入了Leaky ReLU激活函数代替ReLU。以太湖11个优势属共计1036张图像为数据来源进行对比验证。除星杆藻外,RAN-11对单一优势属的的查准率都在90%以上,并且有5个优势属达到100%的查准率。RAN-11的识别准确率为95.67%,推理速率为41.5帧/s,不仅比Attention-92（95.19%的准确率,23.6帧/s）更准确,而且比Attention-56（94.71%的准确率,41.2帧/s）更快,真正兼顾了准确率与效率。研究结果表明：（1）RAN-11在查准率、准确率和推理速率上优于原始残差注意力网络,更优于以词包模型为代表的传统图像识别方法;（2）融合多尺度特征、精简网络结构和优化激活函数是提高卷积神经网络性能的有力手段。建立在经典分类基础之上,本文提出新的残差注意力网络来提升浮游植物鉴定技术,并构建出浮游植物自动化识别系统,识别准确率高、易于推广,对于实现水体中浮游植物的自动化监测具有重要意义。     

葛根芩连汤对泄泻肠道湿热证小鼠肠道双糖酶活性的影响

目的探究葛根芩连汤对泄泻肠道湿热证小鼠肠道双糖酶活性的影响。方法采用“高糖高脂+高温高湿+白酒复合灌胃冰水”的方法制备泄泻肠道湿热证小鼠模型,并运用葛根芩连汤进行干预治疗。分别在干预的第0、2、4、6天无菌采集各组小鼠肠黏膜,运用DNS法测定蔗糖酶活性,ONPG法测定乳糖酶活性,观察葛根芩连汤对泄泻肠道湿热证小鼠肠道双糖酶活性的影响。结果经肠道湿热泄泻造模后,小鼠肠道前段和后段黏膜的乳糖酶和蔗糖酶活性均显著下降,与正常组小鼠相比差异有统计学意义(均P<0.01)。随着治疗时间的延长,治疗组小鼠肠道乳糖酶和蔗糖酶活性与正常组相比有显著的提高(均P<0.05),治疗6 d后,肠道前段黏膜蔗糖酶和乳糖酶活性恢复至正常组水平(P>0.05)。肠道后段乳糖酶活性在第4天时最高,后段黏膜蔗糖酶活性在第6天时最高,与正常组和自愈组相比差异有统计学意义(均P<0.05)。结论泄泻肠道湿热证造模使小鼠肠道黏膜蔗糖酶、乳糖酶等双糖酶的活性显著下降,葛根芩连汤能调节泄泻肠道湿热证小鼠肠道黏膜乳糖酶和蔗糖酶的活性,从而发挥治疗泄泻肠道湿热证的疗效。     

The spatial variation of soil bacterial community assembly processes affects the accuracy of source tracking in ten major Chinese cities

Urban soils harbor billions of bacterial cells and millions of species. However, the distribution patterns and assembly processes of bacterial communities remain largely uncharacterized in urban soils. It is also unknown if we can use the bacteria to track soil sources to certain cities and districts. Here, Illumina MiSeq sequencing was used to survey soil bacterial communities from 529 random plots spanning 61 districts and 10 major cities in China. Over a 3,000 km range, community similarity declined with increasing geographic distance(Mantel r=0.62), and community composition was clustered by city(R~2=0.50). Within cities(100 km), the aforementioned biogeographic patterns were weakened. Process analysis showed that homogenizing dispersal and dispersal limitation dominated soil bacterial assembly at small and large spatial scales, respectively. Accordingly, the probabilities of accurately tracking random soil sources to certain cities and districts were 90.0% and 66.7%, respectively. When the tested samples originated from cities that were more than 1,265 km apart, the soil sources could be identified with nearly 100% accuracy. Overall, this study demonstrates the strong distance-decay relationship and the clear geographic zoning of urban soil bacterial communities among cities. The varied importance of different community assembly processes at multiple spatial scales strongly affects the accuracy of microbial source tracking.     

High glucose concentration induces endothelial cell proliferation by regulating cyclin‐D2‐related miR‐98

Cyclin D2 is involved in the pathology of vascular complications of type 2 diabetes mellitus (T2DM). This study investigated the role of cyclin‐D2‐regulated miRNAs in endothelial cell proliferation of T2DM. Results showed that higher glucose concentration (4.5 g/l) significantly promoted the proliferation of rat aortic endothelial cells (RAOECs), and significantly increased the expression of cyclin D2 and phosphorylation of retinoblastoma 1 (p‐RB1) in RAOECs compared with those under low glucose concentration. The cyclin D2‐3′ untranslated region is targeted by miR‐98, as demonstrated by miRNA analysis software. Western blot also confirmed that cyclin D2 and p‐RB1 expression was regulated by miR‐98. The results indicated that miR‐98 treatment can induce RAOEC apoptosis. The suppression of RAOEC growth by miR‐98 might be related to regulation of Bcl‐2, Bax and Caspase 9 expression. Furthermore, the expression levels of miR‐98 decreased in 4.5 g/l glucose‐treated cells compared with those treated by low glucose concentration. Similarly, the expression of miR‐98 significantly decreased in aortas of established streptozotocin (STZ)‐induced diabetic rat model compared with that in control rats; but cyclin D2 and p‐RB1 levels remarkably increased in aortas of STZ‐induced diabetic rats compared with those in healthy control rats. In conclusion, this study demonstrated that high glucose concentration induces cyclin D2 up‐regulation and miR‐98 down‐regulation in the RAOECs. By regulating cyclin D2, miR‐98 can inhibit human endothelial cell growth, thereby providing novel therapeutic targets for vascular complication of T2DM.     

稻田蜘蛛与飞虱制约关系及其利用

1972—1991年间,我们对稻田蜘蛛及其相关害虫—褐稻虱进行了较为系统的调查研究。本文主要论述稻田蜘蛛种类多,发生量大,繁殖力强.与稻飞虱的季节消长、生态分布、变态类型相一致,彼此制约关系明显,有良好的保护利用价值。创造有利于蜘蛛发生发展的环境,合理施用化学农药,既是保护利用蜘蛛的有效途径,又可保护飞虱的其它天敌,发挥多种天敌联合控制飞虱的作用,在经济、生态与社会三方面都可收到显著效益。     

Epithelium Expressing the E7 Oncoprotein of HPV16 Attracts Immune-Modulatory Dendritic Cells to the Skin and Suppresses Their Antigen-Processing Capacity

Antigen presenting cells (APCs) in skin can promote either antigen-specific effector functions or antigen tolerance, and thus determine clearance or persistence of cutaneous viral infections. Human papillomavirus (HPV) infections can persist in squamous epithelium in immunocompetent individuals, and some persisting HPV infections, particularly with HPV16, promote malignant epithelial transformation. Here, we investigate whether local expression of the HPV16 protein most associated with malignant transformation, HPV16-E7, affects the phenotype and function of APC subsets in the skin. We demonstrate an expanded population of Langerhans cells in HPV16-E7 transgenic skin with distinct cell surface markers which express immune-modulatory enzymes and cytokines not expressed by cells from non transgenic skin. Furthermore, HPV16-E7 transgene expression in keratinocytes attracts new APC subsets to the epidermis. In vivo migration and transport of antigen to the draining lymph node by these APCs is markedly enhanced in HPV16-E7 expressing skin, whereas antigen-processing, as measured by proteolytic cleavage of DQ-OVA and activation of T cells in vivo by APCs, is significantly impaired. These data suggest that local expression of HPV16-E7 in keratinocytes can contribute to persisting infection with this oncogenic virus, by altering the phenotype and function of local APCs.     

口蹄疫病毒外源序列插入位点的研究进展

伴随着对口蹄疫病毒(FMDV)蛋白结构功能的深入研究,发现FMDV能够表达外源基因片段。通过对FMDV的基因进行改造和修饰研究,进而实现了不同应用目的,如提高病毒滴度、引入标记、提高免疫应答、降低致病性等。文中主要从FMDV接受外源基因插入位点角度来介绍现阶段关于FMDV表达外源基因相关进展。     

间充质干细胞分化为心肌细胞的诱导方法研究进展

间充质干细胞作为一种取材方便、易于分离培养、体外扩增快、免疫原性低的成体干细胞,具有自我更新和多向分化潜能,可在体内外不同的诱导条件下分化为心肌细胞,是理想的心肌再生治疗的种子细胞。本文综述了间充质干细胞分化为心肌细胞的诱导方法,包括化学试剂、中药制剂、机械力和电磁刺激、心肌环境因子、损伤组织条件培养、组织工程方法等,为其在心肌损伤性疾病尤其是心肌梗死治疗中的应用提供基础。