Comparative Evaluation of Three Supplements for Helicobacter pylori Growth in Liquid Culture

Helicobacter pylori, a microaerophilic fastidious bacterium, has been cultured on various plating and broth media since its discovery. Although the agar media can be sufficient for the identification, typing, and antibiotic resistance studies, no secretory antigen of H. pylori can be evaluated in such media. Thus, satisfactory growth of H. pylori in liquid culture which is needed for analysis of secretory proteins without the presence of interfering agents is in demand. We assessed the impact of β-cyclodextrin, Fetal Bovine Serum (FBS), and charcoal as supplements for H. pylori growth. Furthermore, we aimed to identify the most favorable supplement that supports the secretion of the dominant secretory protein, vacuolating cytotoxin (VacA). Five clinical strains were cultured on broth media and the growth, viability, morphology, and protein content of each strain were determined. Our results revealed that β-cyclodextrin supports the growth rate, viability, and cell lysate protein content to the extent similar to FBS. Application of β-cyclodextrin is found to postpone spiral to coccoid conversion up to 72 h of incubation. Although FBS supports a higher VacA protein content, presence of interfering macromolecules in FBS questions its utility particularly for purposes of studying extra cellular proteins such as VacA. This study recommends further application of β-cyclodextrin as a culture supplement with the potential capacity in neutralizing toxic compounds and flourishing the secretion of H. pylori proteins without addition of interfering proteins.     

Synthesis and characterization of novel organosoluble and optically active aromatic polyesters containing <Emphasis Type="SmallCaps">l</Emphasis>-methionine and phthalimide pendent groups

5-(4-Methylthio-2-phthalimidylbutanoylamino)isophthalic acid (5) as a novel diacid monomer containing phthalimide and flexible chiral groups was prepared by dehydration of l-methionine and phthalic anhydride followed by reacting with thionyl chloride and then treating with 5-aminoisophthalic acid (5AIPA) in dry N,N-dimethylacetamide (DMAc). A series of novel polyesters (PEs) containing phthalimide group was prepared by the reaction of diacid monomer 5 with several aromatic diols via direct polyesterification with tosyl chloride/pyridine/dimethylformamide (DMF) system as condensing agent. The resulting new polymers were obtained in good yields and inherent viscosities ranging between 0.21 and 0.51 dLg⁻¹ were characterized with FT-IR, ¹H NMR, elemental and thermogravimetric analysis techniques. These polymers are readily soluble in polar organic solvents such as DMAc, DMF, dimethyl sulfoxide and protic solvents such as sulfuric acid. Specific rotation experiments demonstrate the optical activity induction due to successful insertion of l-methionine in the structure of pendent groups. Thermogravimetric analysis showed that the 10% weight loss temperature in a nitrogen atmosphere were more than 315°C, which indicates that the resulting PEs have good thermal stability.     

l-cysteine-induced fabrication of spherical titania nanoparticles within poly(ether-imide) matrix

In the presented study, a new l-cysteine-containing diamine is synthesized and fully characterized and its application for the in situ sol–gel fabrication of poly(ether-imide)/titania nano hybrid materials is investigated. The electron microscopic photographs (TEM, FE-SEM and AFM) of the resulted materials confirm the production of spherical nanoparticles with well dispersion and narrow particle size distribution which is a usual challenge in the sol–gel methods. In addition to the positive effects on the particles morphology, the existence of amino acid containing pendant groups in the structure of polymer chains led to the comprehensive interaction with titania phase. As a result, the improvement in the flexibility of polymer backbone (as one of the most serious difficulties in polyimides processing) is obtained while its thermal stability dose is not sacrificed (confirmed by TGA and DSC techniques).     

Identification of the Triticoid-type grains (Poaceae) from archaeobotanical assemblages in southwest Asia as Heteranthelium piliferum (Banks & Sol.) Hochst.

Vegetation History and Archaeobotany - The so-called Triticoid-type grains are known from several prehistoric sites in southwest Asia and their identification has long been unclear. They resemble...     

Evaluation of the adjuvant activity of naloxone,an opioid receptor antagonist,in combination with heat-killed Listeria monocytogenes vaccine

We have previously demonstrated the adjuvant activity of naloxone (NLX), a general opioid antagonist, using a DNA vaccine for herpes simplex virus type 1. Here, the adjuvant activity of NLX has been evaluated using a heat-killed Listeria monocytogenes (HKLM) vaccine as a model for general immunization against intracellular bacteria. BALB/c mice were divided into three groups: the Vac group received the HKLM vaccine alone; the NLX–Vac group received the HKLM vaccine in combination with the adjuvant NLX; and the control group received phosphate buffered saline (PBS). Our results indicate that the administration of NLX as an adjuvant enhances the ability of the HKLM vaccine to increase lymphocyte proliferation, delayed type hypersensitivity, and skewing of the immune response toward a T-helper 1 (Th1) pattern. Additionally, combination of NLX with the HKLM vaccine improves protective immunity against L. monocytogenes. In conclusion, administration of NLX as an adjuvant for the HKLM vaccine can enhance cell-mediated immunity and shift the immune response to Th1.     

New triple-helix DNA stabilizing agents

Several substituted quinolin-4-amines and heteroaromatic analogs were synthesized and evaluated for interaction with triplex polydA.2polydT and duplex polydA.polydT by using UV-thermal melting experiments. Excellent triple-helix DNA ligands with high affinity toward T.A.T triplets and triple/duplex selectivity were designed through a rational approach.     

3D-QSAR,molecular docking,and molecular dynamic simulations for prediction of new Hsp90 inhibitors based on isoxazole scaffold

Heat shock protein 90(Hsp90), as a molecular chaperone, play a crucial role in folding and proper function of many proteins. Hsp90 inhibitors containing isoxazole scaffold are currently being used in the treatment of cancer as tumor suppressers. Here in the present studies, new compounds based on isoxazole scaffold were predicted using a combination of molecular modeling techniques including three-dimensional quantitative structure–activity relationship (3D-QSAR), molecular docking and molecular dynamic (MD) simulations. Comparative molecular field analysis (CoMFA) and comparative molecular similarity indices analysis (CoMSIA) were also done. The steric and electrostatic contour map of CoMFA and CoMSIA were created. Hydrophobic, hydrogen bond donor and acceptor of CoMSIA model also were generated, and new compounds were predicted by CoMFA and CoMSIA contour maps. To investigate the binding modes of the predicted compounds in the active site of Hsp90, a molecular docking simulation was carried out. MD simulations were also conducted to evaluate the obtained results on the best predicted compound and the best reported Hsp90 inhibitors in the 3D-QSAR model. Findings indicate that the predicted ligands were stable in the active site of Hsp90.     

The effects of gelatin,fibrin-platelet glue and their combination on healing of the experimental critical bone defect in a rat model: radiological,histological, scanning ultrastructural and biomechanical evaluation

Fibrin-platelet glue (FPG) is a blood derivative, in which platelets and fibrinogen are concentrated in a small plasma volume, by differential centrifugation and precipitation. It can form a three-dimensional and biocompatible fibrin scaffold with a myriad of growth factors and proteins that are released progressively to the local environment and contribute to the accelerated postoperative bone healing. Gelatin (Gel) is a derivative of collagen and can promote cell adhesion and proliferation due to its unique sequence of amino acids, so it is suitable for bone tissue applications. This study examined the effects of Gel, FPG and their combinations as bone scaffold on the healing of surgically created critical-size defects in rat radius. Fifty critical size defects of 5 mm long were bilaterally created in the radial diaphysis of 25 rats. The animals were randomly divided into five equal groups as empty defect, autograft, Gel, FPG and Gel–FPG groups (n = 10 in each group). Radiographs of each forelimb were taken postoperatively on the 1st day and then at the 28th and 56th days post injury to evaluate bone formation, union and remodeling of the defect. After 56 days, the rats were euthanized and their harvested healing bone samples were evaluated by histopathology, scanning electron microscopy (SEM) and biomechanical testing. The results of present study showed that the Gel alone did not significantly affect bone healing and regeneration; however, the Gel treated defects promoted healing more than those that were left untreated (negative control). Furthermore, the FPG-enhanced grafts provided a good scaffold containing numerous growth factors for proliferation of osteoinduction and was effective in improving the structural and functional properties of the newly formed bone more than that of the untreated and also the Gel treated groups. Incorporation of Gel into the FPG scaffold improved healing potential of the FPG scaffold; however, it was still inferior to the autograft (positive control). Although the Gel–FPG scaffolds had best effectiveness during bone regeneration, it still needs to be further enhanced by incorporation of the ceramic and osteoinductive biomaterials.     

Neural network models for earthquake magnitude prediction using multiple seismicity indicators

Neural networks are investigated for predicting the magnitude of the largest seismic event in the following month based on the analysis of eight mathematically computed parameters known as seismicity indicators. The indicators are selected based on the Gutenberg-Richter and characteristic earthquake magnitude distribution and also on the conclusions drawn by recent earthquake prediction studies. Since there is no known established mathematical or even empirical relationship between these indicators and the location and magnitude of a succeeding earthquake in a particular time window, the problem is modeled using three different neural networks: a feed-forward Levenberg-Marquardt backpropagation (LMBP) neural network, a recurrent neural network, and a radial basis function (RBF) neural network. Prediction accuracies of the models are evaluated using four different statistical measures: the probability of detection, the false alarm ratio, the frequency bias, and the true skill score or R score. The models are trained and tested using data for two seismically different regions: Southern California and the San Francisco bay region. Overall the recurrent neural network model yields the best prediction accuracies compared with LMBP and RBF networks. While at the present earthquake prediction cannot be made with a high degree of certainty this research provides a scientific approach for evaluating the short-term seismic hazard potential of a region.     

Induction of tenogenic differentiation of equine adipose-derived mesenchymal stem cells by platelet-derived growth factor-BB and growth differentiation factor-6

Molecular Biology Reports - Managing&nbsp;tendon healing process is complicated mainly due to&nbsp;the limited regeneration capacity of tendon tissue. Mesenchymal stem cells (MSCs) have...