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681.
A statistical method is presented for the interpretation of intramolecular distance measurements by the fluorescence energy transfer technique in systems for which the detailed geometries of the donor-acceptor pairs are unknown. This method enables calculation of the probability that a specified distance range corresponds to the actual distance to be measured. It makes use of the numerically calculated probability density function for the distance of interest. The two general systems considered are the single donor-acceptor pair and the multi-donor-single-acceptor transfer. In both systems, the statistical method incorporates the uncertainty in the orientation of the donor and acceptor dipoles. In addition, it can take into account the rotational mobility of the donor dipoles determined by time-dependent emission anisotropy measurements. When more than one donor is involved in the transfer process, the uncertainties associated with the number and location of individual donors and the size and shape of the donor distribution are also incorporated in calculating the distance ranges. Application of the method was demonstrated for a wide range of transfer efficiency and Ro values for the single donor-acceptor system. Specific examples are also presented for interpretation of both single donor-acceptor and multi-donor-single-acceptor energy transfer measurements performed in order to reveal the spatial relationship of the sigma subunit and the rifampicin binding site in the Escherichia coli RNA polymerase (see Wu, C.-W., Yarbrough, L. R., Wu, F. Y.-H., and Hillel, Z. (1976), Biochemistry, preceding paper in this issue). Analysis of these energy transfer data by methods which use average values of the unknown geometrical parameters of the system yielded results similar to those obtained by the statistical method. However, the statistical method represents a more realistic approach to the interpretation of energy transfer measurements since it provides information concerning the entire range of possible distances and their relative likelihood. 相似文献
682.
Cucurbitacins I and D and two new cucurbitacins, isocucurbitacin D and 3-epi-isocucurbitacin D, were isolated from Phormium tenax. A new cucurbitacin, dihydroisocucurbitacin B, was isolated from Marah oreganus. The acid sensitivity of the 2β-hydroxy-3-keto system found in cucurbitacin D was demonstrated. 相似文献
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Daily rhythms of nonshivering thermogenesis NST were studied in common spiny mice Acomys cahirinus, acclimated to different photoperiod regimes (16L:8D and 8L:16D) at a constant ambient temperature of 26°C. Noradrenaline NA (1.5 mg/kg subcutaneous) was injected at: 06:00, 12:00, 18:00 and 24:00 h (±15 min). NST was measured as the ratio between the maximal oxygen consumption (VO2) as response to NA — VO2NA and VO2 measured at 26°C — VO2 min. Rectal temperatures TbNA and Tb min respectively were recorded at the end of VO2 measurements. Significant variations in Tb min, TbNA, and NST were revealed, under the two different photoperiod regimes. Significant differences in VO2 min, NST, Tb min and TbNA were also recorded within each photoperiod acclimation group. These results suggest that daily and photoperiod depended variations in the brown adipose tissue activity, presumably emerge from amount of unoccupied receptors or changes in the receptors affinity to NA. 相似文献
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Floral development in bolting garlic 总被引:5,自引:0,他引:5
Garlic (Allium sativum L.) is a completely sterile plant, propagated only vegetatively. The aim of this research was to study the sequence of morphological
processes occurring during floral initiation and development of a number of bolting garlic accessions from the Allium gene bank in Israel by using SEM. The garlic inflorescence is an umbel-like flower arrangement, the branches (flower clusters)
of which arise from a common meristem. The numerous flowers have a distinct morphology typical of the genus Allium. Flower-stalk elongation precedes the swelling of the apical meristem and its subdivision into several centers of floral development.
Within clusters, floral primordia develop unevenly. Differentiation of topsets begins after floral differentiation on the
peripheral part of the apical surface, and their size, number and rate of development vary among genotypes. At least four
morphological types differing in flower/topset ratio were distinguished among the 12 clones studied in this investigation.
For further studies of flowering physiology and fertility restoration, only clones which can differentiate the greatest proportion
of normal flowers and the least of topsets in the apical meristem should be selected.
Received: 28 June 2000 / Revision accepted: 6 November 2000 相似文献
688.
The generation of binding modes between two molecules, alsoknown as molecular docking, is a key problem in rational drugdesign and biomolecular recognition. Docking a ligand, e.g.,a drug molecule or a protein molecule, to a protein receptor,involves recognition of molecular surfaces as molecules interactat their surface. Recent studies report that the activity ofmany molecules induces conformational transitions by hinge-bending,which involves movements of relatively rigid parts with respectto each other. In ligandreceptor binding, relative rotationalmovements of molecular substructures about their commonhinges have been observed. For automatically predicting flexiblemolecular interactions, we adapt a new technique developed inComputer Vision and Robotics for the efficient recognition ofpartially occluded articulated objects. These type of objectsconsist of rigid parts which are connected by rotary joints(hinges). Our approach is based on an extension and generalizationof the Geometric Hashing and Generalized Hough Transform paradigmfor rigid object recognition. Unlike other techniques whichmatch each part individually, our approach exploits forcefullyand efficiently enough the fact that the different rigid partsdo belong to the same flexible molecule. We show experimentalresults obtained by an implementation of the algorithm for rigidand flexible docking. While the correct, crystalboundcomplex is obtained with a small RMSD, additional, predictivehigh scoring binding modes are generated as well.The diverse applications and implications of this general, powerfultool are discussed 相似文献