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101.
Jorge Mansur Medina Juliany Cola Fernandes Rodrigues Otacilio C Moreira Geórgia Atella Wanderley de Souza Hector Barrabin 《Memórias do Instituto Oswaldo Cruz》2015,110(1):48-55
Phytomonas serpens are flagellates in the family Trypanosomatidae that parasitise the
tomato plant (Solanum lycopersicum L.), which results in fruits with low commercial
value. The tomato glycoalkaloid tomatine and its aglycone tomatidine inhibit the
growth of P. serpens in axenic cultures. Tomatine, like many other saponins, induces
permeabilisation of the cell membrane and a loss of cell content, including the
cytosolic enzyme pyruvate kinase. In contrast, tomatidine does not cause
permeabilisation of membranes, but instead provokes morphological changes, including
vacuolisation. Phytomonas treated with tomatidine show an increased accumulation of
labelled neutral lipids (BODYPY-palmitic), a notable decrease in the amount of
C24-alkylated sterols and an increase in zymosterol content. These
results are consistent with the inhibition of 24-sterol methyltransferase (SMT),
which is an important enzyme that is responsible for the methylation of sterols at
the 24 position. We propose that the main target of tomatidine is the sterols
biosynthetic pathway, specifically, inhibition of the 24-SMT. Altogether, the results
obtained in the present paper suggest a more general effect of alkaloids in
trypanosomatids, which opens potential therapeutic possibilities for the treatment of
the diseases caused by these pathogens. 相似文献
102.
Direct infusion ESI‐IT‐MSn alkaloid profile and isolation of tetrahydroharman and other alkaloids from Bocageopsis pleiosperma maas (Annonaceae) 下载免费PDF全文
103.
Seong Min Lee Erin M. Riley Mark B. Meyer Nancy A. Benkusky Lori A. Plum Hector F. DeLuca J. Wesley Pike 《The Journal of biological chemistry》2015,290(29):18199-18215
1,25-Dihydroxyvitamin D3 (1,25(OH)2D3) plays an integral role in calcium homeostasis in higher organisms through its actions in the intestine, kidney, and skeleton. Interestingly, although several intestinal genes are known to play a contributory role in calcium homeostasis, the entire caste of key components remains to be identified. To examine this issue, Cyp27b1 null mice on either a normal or a high calcium/phosphate-containing rescue diet were treated with vehicle or 1,25(OH)2D3 and evaluated 6 h later. RNA samples from the duodena were then subjected to RNA sequence analysis, and the data were analyzed bioinformatically. 1,25(OH)2D3 altered expression of large collections of genes in animals under either dietary condition. 45 genes were found common to both 1,25(OH)2D3-treated groups and were composed of genes previously linked to intestinal calcium uptake, including S100g, Trpv6, Atp2b1, and Cldn2 as well as others. An additional distinct network of 56 genes was regulated exclusively by diet. We then conducted a ChIP sequence analysis of binding sites for the vitamin D receptor (VDR) across the proximal intestine in vitamin D-sufficient normal mice treated with vehicle or 1,25(OH)2D3. The residual VDR cistrome was composed of 4617 sites, which was increased almost 4-fold following hormone treatment. Interestingly, the majority of the genes regulated by 1,25(OH)2D3 in each diet group as well as those found in common in both groups contained frequent VDR sites that likely regulated their expression. This study revealed a global network of genes in the intestine that both represent direct targets of vitamin D action in mice and are involved in calcium absorption. 相似文献
104.
Muricea is an amphi-American genus. Verrill proposed dividing the species from the Pacific Ocean into three genera and established the genus Eumuricea for five eastern Pacific species with tubular calyces. Eumuricea is basically characterized by colonies with elongate, cylindrical calyces with truncate margins and star-like opercula, and the occurrence of unilateral spinous spindles. According to these characteristics, Eumuricea does not show enough difference from Muricea to be treated as a separate genus. Original type material of Eumuricea was morphologically analysed and illustrated using optical and scanning electron microscopy. We conclude that the eastern Pacific species should be placed in the genus Muricea and form a group characterised by tubular calyces that comprises four species at present, Muricea
acervata, Muricea
hispida, Muricea
squarrosa, and Muricea
tubigera and a dubious species Muricea
horrida. Lectotypes were designated for Muricea
squarrosa and Muricea
hispida to establish their taxonomic status. The genus Eumuricea has also been misunderstood by former authors who erroneously assigned species to it. For these species we propose new combinations: Swiftia
pusilla, Astrogorgia
splendens and Astrogorgia
ramosa. 相似文献
105.
Franziska Volland-Voigt Achim Br?uning Oswaldo Ganzhi Thorsten Peters Hector Maza 《Trees - Structure and Function》2011,25(1):39-48
Stem diameter increments of the broadleaved deciduous tree species Tabebuia chrysantha were measured with high-resolution dendrometers in a tropical lower montane forest and in a dry forest in southern Ecuador,
the latter showing a distinct dry season. Those analyses were complemented by wood anatomical studies on regularly collected
microcores to determine the season of active cambial growth and the time of formation of annual growth boundaries. The length
of the cambial active period varied between 3 and 7 months at the tropical lower montane forest and 2 and 4 months in the
dry forest, respectively. During dry days, amplitudes of daily stem diameter variations correlated with vapour pressure deficit.
During October and November, inter-annual climate variations may lead to dry and sunny conditions in the tropical lower montane
forest, causing water deficit and stem diameter shrinkage in T. chrysantha. The results of the climate–growth analysis show a positive relationship between tree growth and rainfall as well as vapour
pressure deficit in certain periods of the year, indicating that rainfall plays a major role for tree growth. 相似文献
106.
107.
Mi-Youn K Brusniak Sung-Tat Kwok Mark Christiansen David Campbell Lukas Reiter Paola Picotti Ulrike Kusebauch Hector Ramos Eric W Deutsch Jingchun Chen Robert L Moritz Ruedi Aebersold 《BMC bioinformatics》2011,12(1):1-15
Background
Copy number variants (CNVs), including deletions, amplifications, and other rearrangements, are common in human and cancer genomes. Copy number data from array comparative genome hybridization (aCGH) and next-generation DNA sequencing is widely used to measure copy number variants. Comparison of copy number data from multiple individuals reveals recurrent variants. Typically, the interior of a recurrent CNV is examined for genes or other loci associated with a phenotype. However, in some cases, such as gene truncations and fusion genes, the target of variant lies at the boundary of the variant.Results
We introduce Neighborhood Breakpoint Conservation (NBC), an algorithm for identifying rearrangement breakpoints that are highly conserved at the same locus in multiple individuals. NBC detects recurrent breakpoints at varying levels of resolution, including breakpoints whose location is exactly conserved and breakpoints whose location varies within a gene. NBC also identifies pairs of recurrent breakpoints such as those that result from fusion genes. We apply NBC to aCGH data from 36 primary prostate tumors and identify 12 novel rearrangements, one of which is the well-known TMPRSS2-ERG fusion gene. We also apply NBC to 227 glioblastoma tumors and predict 93 novel rearrangements which we further classify as gene truncations, germline structural variants, and fusion genes. A number of these variants involve the protein phosphatase PTPN12 suggesting that deregulation of PTPN12, via a variety of rearrangements, is common in glioblastoma.Conclusions
We demonstrate that NBC is useful for detection of recurrent breakpoints resulting from copy number variants or other structural variants, and in particular identifies recurrent breakpoints that result in gene truncations or fusion genes. Software is available at http://http.//cs.brown.edu/people/braphael/software.html. 相似文献108.
109.
110.
The phlebotomine sand fly Lutzomyia longipalpis is the most important vector of American visceral leishmaniasis (AVL), the disseminated and most serious form of the disease in Central and South America. In the natural environment, most female L. longipalpis are thought to survive for less than 10 days and will feed on blood only once or twice during their lifetime. Successful transmission of parasites occurs when a Leishmania-infected female sand fly feeds on a new host. Knowledge of factors affecting sand fly longevity that lead to a reduction in lifespan could result in a decrease in parasite transmission. Catalase has been found to play a major role in survival and fecundity in many insect species. It is a strong antioxidant enzyme that breaks down toxic reactive oxygen species (ROS). Ovarian catalase was found to accumulate in the developing sand fly oocyte from 12 to 48 hours after blood feeding. Catalase expression in ovaries as well as oocyte numbers was found to decrease with age. This reduction was not found in flies when fed on the antioxidant ascorbic acid in the sugar meal, a condition that increased mortality and activation of the prophenoloxidase cascade. RNA interference was used to silence catalase gene expression in female Lu. longipalpis. Depletion of catalase led to a significant increase of mortality and a reduction in the number of developing oocytes produced after blood feeding. These results demonstrate the central role that catalase and ROS play in the longevity and fecundity of phlebotomine sand flies. 相似文献