Protection of the villus epithelial cells of the small intestine from rotavirus infection does not require immunoglobulin A

Immunoglobulin A (IgA) is the primary immune response induced in the intestine by rotavirus infection, but vaccination with virus-like particles induces predominantly IgG, not IgA. To definitively assess the role of IgA in protection from rotavirus infection, IgA knockout mice, which are devoid of serum and secretory IgA, were infected and then rechallenged with murine rotavirus at either 6 weeks or 10 months. Following primary rotavirus infection, IgA knockout mice cleared virus as effectively as IgA normal control mice. Rotavirus-infected IgA knockout mice produced no serum or fecal IgA but did have high levels of antirotavirus serum IgG and IgM and fecal IgG, whereas IgA normal control mice made both serum IgA and IgG and fecal IgA. Both IgA normal and IgA knockout mice were totally protected from rotavirus challenge at 42 days. Ten months following a primary infection, both IgA normal and knockout mice still had high levels of serum and fecal antirotavirus antibody and were totally protected from rotavirus challenge. To determine if compensatory mechanisms other than IgG were responsible for protection from rotavirus infection in IgA knockout mice, mice were depleted of CD4(+) T cells or CD8(+) T cells. No changes in the level of protection were seen in depleted mice. These data show that fecal or systemic IgA is not essential for protection from rotavirus infection and suggest that in the absence of IgA, IgG may play a significant role in protection from mucosal pathogens.     

Chlorophyll f-driven photosynthesis in a cavernous cyanobacterium

Chlorophyll (Chl) f is the most recently discovered chlorophyll and has only been found in cyanobacteria from wet environments. Although its structure and biophysical properties are resolved, the importance of Chl f as an accessory pigment in photosynthesis remains unresolved. We found Chl f in a cyanobacterium enriched from a cavernous environment and report the first example of Chl f-supported oxygenic photosynthesis in cyanobacteria from such habitats. Pigment extraction, hyperspectral microscopy and transmission electron microscopy demonstrated the presence of Chl a and f in unicellular cyanobacteria found in enrichment cultures. Amplicon sequencing indicated that all oxygenic phototrophs were related to KC1, a Chl f-containing cyanobacterium previously isolated from an aquatic environment. Microsensor measurements on aggregates demonstrated oxygenic photosynthesis at 742 nm and less efficient photosynthesis under 768- and 777-nm light probably because of diminished overlap with the absorption spectrum of Chl f and other far-red absorbing pigments. Our findings suggest the importance of Chl f-containing cyanobacteria in terrestrial habitats.The textbook concept that oxygenic phototrophs primarily use radiation in the visible range (400–700 nm) has been challenged by several findings of unique cyanobacteria and chlorophylls (Chl) over the past two decades (Miyashita et al., 1996; Chen et al., 2010; Croce and van Amerongen, 2014) Unicellular cyanobacteria in the genus Acaryochloris primarily employ Chl d for oxygenic photosynthesis at 700–720 nm (Miyashita et al., 1996) and thrive in shaded habitats with low levels of visible light but replete of near-infrared radiation (NIR, >700 nm, Kühl et al., 2005; Behrendt et al., 2011, 2012). Furthermore, Chl f was recently discovered in filamentous (Chen et al., 2010; Airs et al., 2014; Gan et al., 2014) and unicellular cyanobacteria (Miyashita et al., 2014), enabling light harvesting even further into the NIR region up to ∼740 nm, often aided by employing additional far-red light-absorbing pigments such as Chl d and phycobiliproteins (Gan et al., 2014). Whereas the biochemical structure (Willows et al., 2013) and biophysical properties (Li et al., 2013; Tomo et al., 2014) of Chl f have been studied in detail, the actual importance of this new chlorophyll for photosynthesis is hardly explored (Li et al., 2014).Chlorophyll f has been found in cyanobacteria originating from aquatic/wet environments: the filamentous Halomicronema hongdechloris from stromatolites in Australia (Chen et al., 2012), a unicellar morphotype (Strain KC1) from Lake Biwa in Japan (Akutsu et al., 2011; Miyashita et al., 2014) and a filamentous Leptolyngbya sp. strain (JSC-1, Gan et al., 2014) from a hot-spring and in a unicellular Chlorogloeopsis fritschii strain from rice paddies (Airs et al., 2014). In this study, we report on a unicellular Chl f-containing cyanobacterium originating from a wet cavernous habitat and demonstrate its capability of NIR-driven oxygenic photosynthesis. Enrichments of the new cyanobacterium were obtained from a dense dark green-blackish biofilm dominated by globular morphotypes of Nostocaceae growing on moist limestone outside Jenolan Caves, NSW, Australia. The sampling site was heavily shaded even during mid-day with low irradiance levels of 400- to 700-nm light varying from 0.5 to 5 μmol photons m⁻² s⁻¹. Biofilms were carefully scraped off the substratum and kept in shaded zip-lock bags in a moist atmosphere until further processing. Samples were then incubated at 28 °C in a f/2 medium under NIR at 720 nm (∼10 μmol photons m⁻² s⁻¹) yielding conspicuous green cell aggregates after several months of incubation. Repeated transfer of the aggregates into fresh medium resulted in a culture predominated by green cell clusters (Figure 1a), exhibiting orange-red fluorescence upon excitation with blue light (Figure 1b). Transmission electron microscopy revealed that the green clusters consisted of slightly elongated unicellular cyanobacteria (∼1- to 2-μm wide and ∼2- to 3-μm long), with stacked thylakoids and embedded in a joint polymer matrix (Figure 1c). Hyperspectral microscopy (Kühl and Polerecky, 2008) of the clusters revealed distinct troughs in the transmission spectra at absorption maxima indicative of Chl a (675–680 nm) and Chl f (∼720 nm; Figure 1d, red line). In situ spectral irradiance measurements at the sampling site showed strong depletion of visible wavelengths in the 480- to 710-nm range (Figure 1d, gray line), whereas highest light levels were found in the near-infrared region of the solar spectrum at 710–900 nm. The presence of Chl a and f was further confirmed in enrichment cultures using high-performance liquid chromatography-based pigment analysis (Figure 1e, Supplementary Figure S1), while no Chl d was detected. In addition, weak spectral signatures of carotenoids and phycobilins, with absorption occurring at ∼495 and 665 nm, were evident in the hyperspectral data. Cyanobacteria, including those producing Chl d/f, are known to actively remodel their pigment content in response to the available light spectrum (Stomp et al., 2007; Chen and Scheer, 2013; Gan et al., 2014) and Chl d/f has almost exclusively been found in cyanobacteria grown under far-red light and not under visible light (Kühl et al., 2005; Chen et al., 2010; Airs et al., 2014; Gan et al., 2014; Li et al., 2014; Miyashita et al., 2014). Recent work describes this acclimation response as ‘Far-Red Light photoacclimation'' (FaRLiP), which, in strain JSC-1, comprises a global change in gene expression and structural remodeling of the PSII/PSI core proteins and phycobilisome constituents (Gan et al., 2014). The extent to which this arrangement results in optimized photosynthetic performance is only known for the NIR (=710 nm)-acclimated strain JSC-1, where exposure to wavelengths >695 nm resulted in 40% higher O₂ evolution rates as compared with cells that were previously adapted to red light (645 nm; Gan et al., 2014). Yet the discrimination of actinic wavelengths and their relative effect on gross photosynthesis in Chl f-containing cells needs further investigation. Using an O₂ microsensor and the light–dark shift method (Revsbech et al., 1983) on embedded Chl f-containing aggregates, we found maximal gross photosynthesis rates (∼1.06 μmol O₂ cm⁻³ s⁻¹) to occur at irradiances of ∼250 μmol photons m⁻² s⁻¹ of 742 nm (half-bandwidth, HBW, 25 nm, Figures 2a and b) with light saturation to occur very early at ∼35 μmol photons m⁻² s⁻¹. Further red-shifted actinic light, that is, 768 nm (HBW 28 nm) and 777 nm (HBW 30 nm), yielded lower O₂ evolution rates, which, in all likelihood, are an effect of the diminished overlap with far-red light-absorbing pigments, including Chl f (Figures 2a and b). As O₂ evolution rates were measured on non-axenic cell aggregates, 16S rDNA amplicon sequencing was employed to determine the microbial diversity found within the enrichment culture. This revealed the presence of a variety of bacterial types, including anoxygenic phototrophs, yet all sequences for known oxygenic phototrophs in the data set (∼9.3% of all reads on the order level, Supplementary Figure S2) formed a single operational taxonomic unit (OTU) closely affiliated with the Chl f-containing strain KC1 (Miyashita et al., 2014, Figure 2c).Open in a separate windowFigure 1Imaging and pigment analysis of Chl f-containing cyanobacteria isolated from a cavernous low-light environment. (a) Representative bright field microscope image of cultured cells grown under 720 nm NIR. (b) Fluorescence image of the same cells as in a, excited at 450–490 nm, with emission being detected at >510 nm. (c) Transmission electron microscopy of a Chl f-containing cyanobacterium with densely stacked thylakoid membranes. (d) Transmittance spectrum of cell aggregate determined by hyperspectral imaging (red line). Ambient light conditions at the site of isolation (gray line), as measured by a spectroradiometer. Note the Chl f-specific in vivo absorption at ∼720 nm in the transmittance spectrum (dotted line). Small insert picture denotes the cells and area of interest (black arrow) from which the spectrum was taken. (e) In vitro absorption spectrum of Chl f extracted from enrichment cultures and analyzed via high-performance liquid chromatography. The two Chl f-specific absorption peaks (404 and 704 nm in acetone:MeOH solvent) are indicated.Open in a separate windowFigure 2Taxonomic affiliation and O₂ evolution of Chl f-containing cells as determined by O₂ microelectrode measurements and 16 S rDNA amplicon sequencing. (a) Emission spectra of narrow-band light-emitting diodes (LEDs) used in this study, with peak emissions at 742, 768 and 777 nm indicated by a–c, respectively. (b) Gross photosynthesis measured via an O₂ microsensor placed in a clump of agarose-embedded Chl f-containing cells. Different NIR irradiance was administered by the LEDs in a and by altering the distance of the LEDs to the embedded cells. (c) Phylogenetic affiliation of known Chl f and/or Chl d-containing cyanobacteria (highlighted in gray) and their respective habitat/place of isolation. Taxonomy was determined by clustering all known oxygenic phototrophs found in enrichment cultures from this study (at order level) into a single OTU (=292 bp length, see Supplementary Materials for details). Phylogeny was inferred using Maximum-likelihood in conjunction with the GTR +I +G nucleotide substitution model, tree stability was tested using bootstrapping with 100 replicates. The analysis involved 39 nucleotide sequences each truncated to a length of 292 bp. Here, the green-sulphur bacterium Chlorobium tepidum TLS was chosen as the outgroup.This advocates that cells from our enrichment culture are related to KC1 cells and supports, in conjunction with further morphological-, physiological- and ultrastructural evidence, that Chl f is extending the usable light spectrum for oxygenic photosynthesis in a cavernous low-light environment. Given the lifestyle and known habitats of recognized Chl d/f-producing cyanobacteria (Figure 2c), we propose that many, if not all, surface-associated cyanobacteria are intrinsically capable of producing far-red light-absorbing pigments and to actively employ them in oxygenic photosynthesis as a result of FaRLiP or similar, yet unknown, mechanisms.     

Interactions between selenium and sulphur nutrition in Arabidopsis thaliana

Selenium (Se) is an essential plant micronutrient, but is toxic at high tissue concentrations. It is chemically similar to sulphur (S), an essential plant macronutrient. The interactions between Se and S nutrition were investigated in the model plant Arabidopsis thaliana (L.) Heynh. Arabidopsis plants were grown on agar containing a complete mineral complement and various concentrations of selenate and sulphate. The Se/S concentration ratio in the shoot ([Se](shoot)/[S](shoot)) showed a complex dependence on the ratio of selenate to sulphate concentration in the agar ([Se](agar)/[S](agar)). Increasing [S](agar) increased shoot fresh weight (FW) and [S](shoot), but decreased [Se](shoot). Increasing [Se](agar) increased both [Se](shoot) and [S](shoot), but reduced shoot FW. The reduction in shoot FW in the presence of Se was linearly related to the shoot Se/S concentration ratio. These data suggest (i) that Se and S enter Arabidopsis through multiple transport pathways with contrasting sulphate/selenate selectivities, whose activities vary between plants of contrasting nutritional status, (ii) that rhizosphere sulphate inhibits selenate uptake, (iii) that rhizosphere selenate promotes sulphate uptake, possibly by preventing the reduction in the abundance and/or activity of sulphate transporters by sulphate and/or its metabolites, and (iv) that Se toxicity occurs because Se and S compete for a biochemical process, such as assimilation into amino acids of essential proteins.     

Of fleas and geese: the impact of an increasing nest ectoparasite on reproductive success

Past studies on the relationship between nest ectoparasites and avian fitness have been primarily limited to altricial hosts. Life history strategies of precocial and altricial birds vary considerably, limiting our ability to infer the effect of nest parasites on fitness of precocial species. Ross's Chen rossii and lesser snow goose Chen caerulescens caerulescens populations have been growing at unprecedented high rates. New limiting factors on vital rates of these precocial birds may arise after populations have been released from previously regulating factors. The flea Ceratophyllus vagabundus vagabundus is an apparently newly emerging nest parasite in the arctic goose colony at Karrak Lake, Nunavut, Canada. We examined the relationship between flea abundance (measured by the proportion of goose eggs covered by blood in each nest) and goose reproductive success from 2001–2004. In three of four years of study, nest success was inversely related to flea abundance in nests. Despite the potential for high costs to individuals, the overall effects of fleas on goose nesting success have thus far been small. We demonstrated that nest parasites negatively influence reproductive success of precocial bird hosts despite host life history strategy of leaving the nest quickly after hatch, which results in minimal exposure to nest parasites compared to altricial birds that raise their young in the nest.     

A ditopic receptor for cation binding and facilitated transport through a supported liquid membrane

The binding properties of an artificial receptor towards a series of cations including Li⁺, Na⁺, K⁺, Mg²⁺, Ca²⁺, Ba²⁺, Fe²⁺ and Al³⁺ in acetonitrile are described. The receptor comprises a photo-responsive pyrene unit connected via a short spacer to a 2,2′:6′,2″-terpyridine metal ion binding site. Interaction of cations with the receptor was monitored by changes in absorption profile and the association constants calculated for 1:1 and 1:2 cation:ligand binding fall within the range log β = 3-12. The receptor is highly fluorescent and quenching of the emission is observed upon cation binding. The potassium picrate transport properties of the membrane-bound receptor are also described. This receptor when immobilised in a polymer support, which separates two aqueous solutions, has been shown to transport potassium ions in the dark with a flux rate of 1.5 × 10⁸ mol/s m². In contrast, when the membrane-bound receptor is selectively illuminated with light (λ > 400 nm), the flux increases to 2.0 × 10⁸ mol/s m². The transport efficiency depends on the nature of the trap used in the receiver phase.