The yeast carboxyl-terminal repeat domain kinase CTDK-I is a divergent cyclin-cyclin-dependent kinase complex.

Saccharomyces cerevisiae CTDK-I is a protein kinase complex that specifically and efficiently hyperphosphorylates the carboxyl-terminal repeat domain (CTD) of RNA polymerase II and is composed of three subunits of 58, 38, and 32 kDa. The kinase is essential in vivo for normal phosphorylation of the CTD and for normal growth and differentiation. We have now cloned the genes for the two smaller kinase subunits, CTK2 and CTK3, and found that they form a unique, divergent cyclin-cyclin-dependent kinase complex with the previously characterized largest subunit protein CTK1, a cyclin-dependent kinase homolog. The CTK2 gene encodes a cyclin-related protein with limited homology to cyclin C, while CTK3 shows no similarity to other known proteins. Copurification of the three gene products with each other and CTDK-I activity by means of conventional chromatography and antibody affinity columns has verified their participation in the complex in vitro. In addition, null mutations of each of the genes and all combinations thereof conferred very similar growth-impaired, cold-sensitive phenotypes, consistent with their involvement in the same function in vivo. These characterizations and the availability of all of the genes encoding CTDK-I and reagents derivable from them will facilitate investigations into CTD phosphorylation and its functional consequences both in vivo and in vitro.     

per mRNA cycling is locked to lights-off under photoperiodic conditions that support circadian feedback loop function.

Circadian fluctuations in per mRNA and protein are central to the operation of a negative feedback loop that is necessary for setting the free-running period and for entraining the circadian oscillator to light-dark cycles. In this study, per mRNA cycling and locomotor activity rhythms were measured under different light and dark cycling regimes to determine how photoperiods affect the molecular feedback loop and circadian behavior, respectively. These experiments reveal that per mRNA peaks in abundance 4 h after lights-off in photoperiods of < or = 16 h, that, phase shifts in per mRNA cycling and behavioral rhythmicity occur rapidly after flies are transferred from one photoperiod to another, and that photoperiods longer than 20 h abolish locomotor activity rhythms and leave per mRNA at a median constitutive level. These results indicate that the per feedback loop uses lights-off as a phase reference point and suggest (along with previous findings for per01 and tim01) that per mRNA cycling is not regulated via simple negative feedback from the per protein.     

Fructose-1,6-bisphosphate as a metabolic substrate in hog ileum smooth muscle during hypoxial

Exogenously applied fructose-1,6-bisphosphate has been reported to be effective in preventing some damage to the small intestine during ischemia. To determine whether exogenously applied fructose-1,6-bisphosphate protects ileum smooth muscle from damage from hypoxia and from reoxygenation, we examined the effect of fructose-1,6-bisphosphate on the ability of hog ileum smooth muscle to maintain isometric force during hypoxia and to generate isometric force after reoxygenation in the presence of 5 mM glucose. After 180 min of hypoxia, tissues incubated with 20 mM fructose-1,6-bisphosphate maintained significantly greater levels of isometric force than tissues incubated in the absence of exogenous substrate (23% of pre-hypoxia force compared to 16%). During the first contraction following reoxygenation there was a significantly greater force generation in tissues incubated with 20 mM fructose-1,6-bisphosphate during the hypoxia period compared to tissues with no exogenous substrate included during the hypoxia period (29% of pre-hypoxia force compared to 19%). However, glucose always was a better metabolic substrate compared to fructose-1,6-bisphosphate under all experimental conditions. The presence of fructose-1,6-bisphosphate during hypoxia likely improved tissue function by fructose-1,6-bisphosphate entering the cells and acting as a glycolytic intermediate, since during a 120 min period of hypoxia, unmounted ileum smooth muscle metabolized 1,6-¹³C-fructose-1,6-bisphosphate to 3-¹³C-lactate. This conversion of 1,6-¹³C-fructose-1,6-bisphosphate to 3-¹³C-lactate was inhibited by the addition of 1 mM iodoacetic acid, a glycolytic inhibitor. We conclude that exogenously provided fructose-1,6-bisphosphate does provide modest protection of ileum smooth muscle from hypoxic damage by functioning as a glycolytic intermediate and improving the cellular energy state.This work was supported in part by NIH (HL48783 to CDH), NSF (Instrumentation Grant 8908304), and the Department of Physiology of the University of Missouri. T. Juergens was supported by the School of Medicine and the Department of Physiology of the University of Missouri.     

Phylogenetic evidence for horizontal transmission of group I introns in the nuclear ribosomal DNA of mushroom-forming fungi

Group I introns were discovered inserted at the same position in the nuclear small-subunit ribosomal DNA (nuc-ssu-rDNA) in several species of homobasidiomycetes (mushroom-forming fungi). Based on conserved intron sequences, a pair of intron-specific primers was designed for PCR amplification and sequencing of intron-containing rDNA repeats. Using the intron-specific primers together with flanking rDNA primers, a PCR assay was conducted to determine presence or absence of introns in 39 species of homobasidiomycetes. Introns were confined to the genera Panellus, Clavicorona, and Lentinellus. Phylogenetic analyses of nuc-ssu-rDNA and mitochondrial ssu-rDNA sequences suggest that Clavicorona and Lentinellus are closely related, but that Panellus is not closely related to these. The simplest explanation for the distribution of the introns is that they have been twice independently gained via horizontal transmission, once on the lineage leading to Panellus, and once on the lineage leading to Lentinellus and Clavicorona. BLAST searches using the introns from Panellus and Lentinellus as query sequences retrieved 16 other similar group I introns of nuc-ssu-rDNA and nuclear large-subunit rDNA (nuc-lsu-rDNA) from fungal and green algal hosts. Phylogenetic analyses of intron sequences suggest that the mushroom introns are monophyletic, and are nested within a clade that contains four other introns that insert at the same position as the mushroom introns, two from different groups of fungi and two from green algae. The distribution of host lineages and insertion sites among the introns suggests that horizontal and vertical transmission, homing, and transposition have been factors in intron evolution. As distinctive, heritable features of nuclear rDNAs in certain lineages, group I introns have promise as phylogenetic markers. Nevertheless, the possibility of horizontal transmission and homing also suggest that their use poses certain pitfalls.      

Regulating cell–cell junctions from A to Z

Epithelial sheets often present a “cobblestone” appearance, but the mechanisms underlying the dynamics of this arrangement are unclear. In this issue, Choi et al. (2016. J. Cell Biol. http://dx.doi.org/10.1083/jcb.201506115) show that afadin and ZO-1 regulate tension and maintain zonula adherens architecture in response to changes in contractility.The textbook view of epithelial cells is that once such cells adopt a close, hexagonal packing, their “honeycomb” or “cobblestone” arrangement is static. This fixed appearance is misleading, as these cells are more like players in a rugby scrum, locked in a tussle in which the forces exerted by each of the players on the others maintains their seemingly static arrangement, but by a very dynamic force balance. How such balance is maintained in epithelia is a subject of substantial interest. A crucial role is played by F-actin and nonmuscle myosin II isoforms, which are deployed in contractile networks that transiently attach to cell–cell junctions to generate tensile forces along cell–cell boundaries (Lecuit and Yap, 2015). Contractile arrays of actomyosin are regulated by the monomeric G protein Rho, its upstream regulators, including Rho guanine nucleotide exchange factors (Quiros and Nusrat, 2014), and its effectors ROCK/Rho kinase and Shroom3 (Nishimura and Takeichi, 2008), but also by tension-mediated feedback between the myosin network and the junction (Lecuit and Yap, 2015). Cell–cell adhesion, including cadherin-dependent adhesion, also plays a crucial role in this process. As cells engage with one another via interactions of the extracellular domains of their cadherin complexes, they transduce forces to the actomyosin cytoskeleton through catenins. β-Catenin binds to the cytoplasmic domain of classical cadherins and recruits α-catenin, which binds F-actin.Given the dynamic nature of epithelia, the attachment of contractile actomyosin networks to junctions are also subject to regulation. One aspect of epithelial architecture that has received relatively little attention is that a typical epithelial monolayer (Fig. 1 A) displays two main types of cell–cell interfaces: bilateral junctions (BCJs), in which two cells establish a relatively long stretch of contact, and cellular vertices, which represent a confluence of three or more cell edges to form tricellular junctions (TCJs) or multicellular junctions. TCJs are not well understood, but are known to contain unique molecular components (Furuse et al., 2014; Flores-Benitez and Knust, 2015). In this issue, Choi et al. show that the multivalent scaffolding proteins afadin and ZO-1/2 regulate the spacing of and tension along lateral contacts in cultured cells, thereby shedding light on how contractile arrays containing bilateral and tri- or multicellular contact points are regulated in epithelia.Open in a separate windowFigure 1.ZO proteins and afadin regulate junctional tension and organization in cultured cells. (A) Untreated MDCK cells have sinuous cell boundaries, whereas ZO KD cells show extremely straight boundaries. When ZO proteins and afadin are knocked down, cells adopt contact zones of irregular length with other cells, sometimes clustering into foci (asterisks). Images courtesy of Mark Peifer (Choi et al., 2016). (B) A model for actomyosin organization at adherens junctions (adapted from Choi et al., 2016). Contractile actomyosin arrays run parallel to bicellular junctions and are anchored by side-on attachments (pink circles). At TCJs, end-on binding of actin, likely stabilized by afadin, anchors actomyosin filaments. In ZO KD cells, contractile elements and cadherin complexes collapse toward TCJs, and myosin minifilaments adopt a regularly spaced arrangement.Afadin and ZO-1/2 are far from new players at junctions. Afadin binds α-catenin, actin, and other cytoskeletal and junctional proteins and associates with the transmembrane protein nectin, which appears to form an alternative adhesion system at adherens junctions (Mandai et al., 2013). The zonula occludens proteins ZO-1 and ZO-2 are tight junction proteins that bind claudins and are required for tight junction formation (Itoh et al., 1999; Balda and Matter, 2008). In addition, ZO proteins also bind to α-catenin (Itoh et al., 1997), are involved in establishing the zonula adherens (ZA; Ikenouchi et al., 2007), and potentiate cadherin-dependent adhesion in Caenorhabditis elegans (Lockwood et al., 2008) and Drosophila melanogaster (Choi et al., 2011). Knockdown of ZO-1 and ZO-2 (ZO KD) in MDCK cells has previously been shown (Fanning et al., 2012) to lead to dramatic alterations of the ZA: F-actin and myosin IIs assemble into striking apical arrays at the ZA, spaced at regular intervals. In addition, the normally sinuous boundaries between cells give way to very straight borders (Fig. 1 A).Using superresolution microscopy, diffraction-limited junctional laser ablation, cell morphometry, kinetic analysis, and a whole-monolayer approach to contractility, Choi et al. (2016) now extend this story. To test whether contractility is increased after ZO KD, the authors first measured the recoil after laser ablation of ZO KD cells; an increase in recoil velocity indicated that the straight junctional boundaries between ZO-depleted cells are under tension. Imaging analysis of BCJs showed that the increase in contractility in ZO KD cells is associated with a strikingly dynamic behavior of the BCJs. Individual BCJs were found to undergo periods of shortening and elongation, whereas neighboring BCJs underwent compensatory, opposite changes in length. These changes in contractility have effects on the entire tissue sheet as well: whereas control cell sheets remained flat when detached from the substratum, ZO KD cells contracted into a cup-like shape. This constriction was blocked by the myosin inhibitor blebbistatin. Overall, these experiments indicated that ZO proteins regulate myosin assembly and contractility across the cellular sheet.To dissect the protein network mediating increased contractility in ZO KD cells, Choi et al. (2016) examined the role of ROCK and found that ROCK inhibitors abolished the straight BCJs, which became curvilinear. Additionally, Shroom3, which is known to recruit ROCK (Nishimura and Takeichi, 2008), was cytoplasmic in control cells but junctional in ZO KD cells. Transient Shroom3 overexpression led to ROCK recruitment to the ZA and drove formation of an actomyosin network similar to that in ZO KD cells. Conversely, Shroom3 knockdown resulted in loss of the actomyosin arrays in ZO KD cells. Collectively, these data indicated that Shroom3 is an effector of increased apical contractility in ZO KD cells.The researchers used ZO KD cells to test how tissue integrity is maintained despite elevated contractibility and how junctions are remodeled to maintain integrity when increased tension is present. Afadin is a good candidate: the Drosophila homologue of afadin, Canoe, plays roles in convergent extension and collective cell migration; in its absence, actomyosin networks at the apex of constricting epithelial cells in the embryo contract in a catastrophic, uncontrolled fashion (Sawyer et al., 2009), suggesting a potential role for afadin in the maintenance of tissue integrity during morphogenetic movements. Choi et al. (2016) therefore turned their attention to afadin. ZO KD cells have significantly more afadin at their adherens junctions and TCJs, a pattern reminiscent of the normal distribution of Canoe in Drosophila (Sawyer et al., 2009). Knocking down afadin by shRNA in ZO KD cells led to further defects in cell–cell boundary maintenance. In addition to the taut appearance of bicellular borders, cell boundary length became much more irregular, with occasional foci of highly contracted cells (Fig. 1 A). Velocimetry analysis and live-cell imaging indicated that loss of both ZO proteins and afadin led to large-scale cell movements within the monolayer not seen after ZO KD alone.New imaging techniques used by Choi et al. (2016) revealed further details about the changes in actomyosin arrays in ZO KD cells. Superresolution imaging of myosin light chain kinase staining via structured illumination showed that myosin II assembles into arrays of myosin minifilaments spaced ∼415 nm apart along bicellular contacts. Superresolution and transmission electron microscopy also revealed reorganization of F-actin and E-cadherin at TCJs in ZO KD cells. Lateral F-actin bundles appeared to terminate end-on at TCJs at sites where E-cadherin was present. ZO KD therefore induces assembly of a remarkably ordered actomyosin array along BCJs, and these arrays appear to be separate contractile units that anchor end-on at the ZA. Moreover, based on staining for vinculin and a specific epitope in αE-catenin that serve as markers for regions under high tension (Yonemura et al., 2010), the end-on attachments of actin cables to the ZA at TCJs experience significant tensile stress. Strikingly, although vinculin and αE-catenin accumulation at TCJs was relatively uniform after ZO KD, their distribution was more heterogeneous after ZO/afadin KD. Differences in staining paralleled differences in cell border length and correlated with the level of tension measured at BCJs after laser cutting, suggesting that afadin contributes to the ability of cells to distribute forces at TCJ/multicellular junctions throughout the monolayer. Lastly, the researchers investigated whether internal cues downstream of ZO KD are sufficient for myosin recruitment or whether such recruitment depends on mechanical cues exerted by neighboring cells. They designed an assay mixing small islands of wild-type cells surrounded by ZO KD cells (or vice versa) and found that the development of the contractile array at the ZA depends on the contractility of neighboring cells; however, afadin recruitment to the ZA was less dependent on the sustained contractility of neighboring cells. Taking these data together, Choi et al. (2016) propose that cells respond to elevated contractility by increasing junctional afadin; because combined ZO/afadin knockdown dramatically alters cell shape and barrier function in response to elevated contractility, afadin acts as a robust scaffold that maintains ZA architecture most crucially at TCJs.Although many aspects of the model proposed by Choi et al. (2016) remain to be tested, their data suggest new features regarding the detailed assembly of actomyosin contractile arrays in confluent cells (Fig. 1 B). In control cells, actomyosin arrays presumably extend parallel to individual BCJs. Choi et al. (2016) propose that these actomyosin bundles act as separate contractile units that terminate near TCJs, allowing the generation of tension along BCJs. In ZO KD cells, excessive assembly of actomyosin filaments, perhaps exacerbated by the tendency of F-actin/myosin minifilament arrays to self-assemble, somehow leads to regularly spaced actomyosin arrays, and perhaps collapse of cadherin complexes and other components toward TCJs. There is a precedent for such lateral collapse of cadherin-dependent attachments: it is a prominent feature of cadherin complexes at sites of high tension in the epidermis of the C. elegans embryo (Choi et al., 2015). If the new model of Choi et al. (2016) is correct, then the foci seen in ZO KD/afadin KD cells may be similar to what happens in a game of tug of war when one team stops pulling. If some end-on attachments (assisted by afadin) fail, filaments might be expected to collapse along BCJs as the other, still tethered end of a set of filaments contracts toward the remaining attachment at the opposite cell vertex.Several other interesting questions remain. First, what is the relationship of the striking, regularly spaced bipolar myosin II minifilaments that form in ZO KD cells to myosin arrays in normal cells? It is clear that untreated cells have junctional actomyosin networks, but not with this strict periodicity. One possibility is that this spacing is simply an epiphenomenon; when not appropriately anchored along junctions, actomyosin networks may self-organize as they are known to do in other systems, such as in the contractile ring and in migrating cells (Srivastava et al., 2015; Fenix et al., 2016). More optimistically, the spacing may represent an intensified version of processes that operate in normal cells at bicellular and multicellular contact sites. If so, components of the model of Choi et al. (2016) will require further investigation. For example, the organization of F-actin along BCJs remains unclear, as are the proteins that mediate the side-on binding envisioned in this model. It is also uncertain whether proteins assist bundling of filaments and what role dynamic growth and shrinkage of actin filaments plays in end-on binding. In some contexts, junctions are capable of seeding polymerization of F-actin (Brieher and Yap, 2013), and it may be that actin dynamics are important in the processes studied here.A second question has to do with the community events within monolayers that Choi et al. (2016) describe. The neighbor effects on ZA morphology that they document are intriguing, as are the long-range accelerated movements of cells lacking both ZO proteins and afadin. Collective properties of monolayers are only beginning to be explored; connecting these properties with subcellullar events is an exciting future challenge. Whatever the answers to these new questions, the work of Choi et al. (2016) refines our understanding of the roles of key scaffolding proteins in organizing and anchoring junctions in epithelia.     

A comparison of snRNP-associated Sm-autoantigens: human N, rat N and human B/B''.

N is a tissue-specific, Sm-epitope bearing, snRNP-associated protein found predominantly in brain. The cDNA sequence encoding human N is compared to those for rat N and human B/B'. The amino acid sequences of human and rat N are 100% conserved. Although the amino acid sequences of N and B/B' are very similar to each other, B/B' contains 50 amino acids which are not present in N. On Northern blots the cDNAs encoding N and B/B' recognize two different RNA species. A comparison of the codon usage, as specified by the open reading frames of N and B/B' as well as results from Southern blots, show that N and B/B' are derived from different genes.     

Coexistence of acid phosphatase and acid mucosubstance in the nucleoid of human blood platelet granules

Summary Fine structural localization of acid phosphatase and acid mucosubstance in the human blood platelet has shown that these two components coexist in the platelet granules. Within the granules acid phosphatase activity and acid mucosubstance both appear confined to the nucleoid region. Additionally, heavy acid phosphatase activity filled occasional small cytoplasmic bodies as well as elongated irregular cell organelles which latter appeared to correspond with atypical granules in morphologic preparations. A complex of mucosubstance with nonenzymatic protein, sequestering the lysosomal enzyme, or a complex of mucosubstance with the enzyme reversibly inactivating it, might explain the cytochemical latency of acid phosphatase in certain lysosomes and the masked dialyzed iron affinity in these sites after glutaraldehyde fixation.     

Methylation of lysine residues of histone fractions in synchronized mommalian cells

Synchronized cultures of mammalian cells were labeled with ¹⁴C-methyl methionine. Labeled methionine methyl groups were incorporated into certain histone fractions, forming methyl lysine. Incorporation of labeled methyl group into histone fractions as ¹⁴C-methyl lysine was followed through the cell cycle from late G₁ into early M. The ¹⁴C-methyl lysine contents of fractions F2a and F3 began to rise in S and reached maxima after termination of DNA and histone synthesis, coincident with the beginning of mitosis, and began to fall by mid-M. The ¹⁴C-methyl lysine content of fraction F2b rose to a maximum early in S, coincident with initiation of DNA synthesis, and rapidly decreased to its original unmethylated level by late S. Fraction F1 remained unmethylated during the period G₁-M. Evidence is presented to demonstrate differential methylation of histone fractions and to substantiate differential temporal coupling of the methylation of specific histone fractions with histone and DNA biosynthesis.     

19F nuclear magnetic resonance as a probe of anticodon structure in 5-fluorouracil-substituted Escherichia coli transfer RNA

The use of 19F nuclear magnetic resonance (n.m.r.) spectroscopy as a probe of anticodon structure has been extended by investigating the effects of tetranucleotide binding to 5-fluorouracil-substituted Escherichia coli tRNA(Val)1 (anticodon FAC). 19F n.m.r. spectra were obtained in the absence and presence of different concentrations of oligonucleotides having the sequence GpUpApX (X = A,G,C,U), which contain the valine codon GpUpA. Structural changes in the tRNA were monitored via the 5-fluorouracil residues located at positions 33 and 34 in the anticodon loop, as well as in all other loops and stems of the molecule. Binding of GpUpApA, which is complementary to the anticodon and the 5'-adjacent FUra 33, shifts two resonances in the 19F spectrum. One, peak H (3.90 p.p.m.), is also shifted by GpUpA and was previously assigned to FUra 34 at the wobble position of the anticodon. The effects of GpUpApA differ from those of GpUpA in that the tetranucleotide induces the downfield shift of a second resonance, peak F (4.5 p.p.m.), in the 19F spectrum of 19F-labeled tRNA(Val)1. Evidence that the codon-containing oligonucleotides bind to the anticodon was obtained from shifts in the methyl proton spectrum of the 6-methyladenosine residue adjacent to the anticodon and from cleavage of the tRNA at the anticodon by RNase H after binding dGpTpApA, a deoxy analog of the ribonucleotide codon. The association constant for the binding of GpUpApA to fluorinated tRNA(Val)1, obtained by Scatchard analysis of the n.m.r. results, is in good agreement with values obtained by other methods. On the basis of these results, we assign peak F in the 19F n.m.r. spectrum of 19F-labeled tRNA(Val)1 to FUra 33. This assignment and the previous assignment of peak H to FUra 34 are supported by the observation that the intensities of peaks F and H in the 19F spectrum of fluorinated tRNA(Val)1 are specifically decreased after partial hydrolysis with nucleass S1 under conditions leading to cleavage in the anticodon loop. The downfield shift of peak F occurs only with adenosine in the 3'-position of the tetranucleotide; binding of GpUpApG, GpUpApC, or GpUpApU results only in the upfield shift of peak H. The possibility is discussed that this base-specific interaction between the 3'-terminal adenosine and the 5-fluorouracil residue at position 33 involves a 5'-stacked conformation of the anticodon loop. Evidence also is presented for a temperature-dependent conformational change in the anticodon loop below the melting temperature of the tRNA.     

Fluorine-19 nuclear magnetic resonance studies of the structure of 5-fluorouracil-substituted Escherichia coli transfer RNA

19F nuclear magnetic resonance has been used to study fully active Escherichia coli tRNA1Val in which 5-fluorouracil has replaced more than 90% of all uracil and uracil-derived modified bases. The 19F spectrum of the native tRNA contains resolved resonances for all 14 incorporated 5-fluorouracils. These are spread over a 6 ppm range, from 1.8 to 7.7 ppm downfield of the standard free 5-fluorouracil. The 19F resonances serve as sensitive monitors of tRNA conformation. Removal of magnesium or addition of NaCl produces major, reversible changes in the 19F spectrum. Most affected is the lowest field resonance (peak A) in the spectrum of the native tRNA. This shifts 2-3 ppm upfield as the Mg2+ concentration is lowered or the NaCl concentration is raised. Thermal denaturation of the tRNA results in a collapse of the spectrum to a single broad peak centered at 4.7 ppm. Study of the pH dependence of the 19F spectrum shows that five incorporated fluorouracils with 19F signals in the central, 4-5.5 ppm, region of the spectrum, peaks C, D, E, F, and H, are accessible to titration in the pH 4.5-9 range. All have pKa's close to that of free 5-fluorouridine (ca. 7.5). Evidence for a conformation change in the tRNA at mildly acidic pHs, ca. 5.5, is also presented. Four of the titratable 5-fluorouracil residues, those corresponding to peaks D, E/F, and H in the 19F spectrum of fluorine-labeled tRNAVal1, are essentially completely exposed to solvent as determined by the solvent isotope shift (SIS) on transfer of the tRNA from H2O to 2H2O. These are also the 5-fluorouracils that readily form adducts with bisulfite, a reagent that reacts preferentially with pyrimidines in single-stranded regions. On the basis of these results, resonances D, E, F, and H in the middle of the 19F spectrum are attributed to 5-fluorouracils in non-base-paired (loop) regions of the tRNA. Evidence from the ionic strength dependence of the 19F spectrum and arguments based on other recent studies with fluorinated tRNAs support earlier suggestions [Horowitz, J., Ofengand, J., Daniel, W. E., & Cohn, M. (1977) J. Biol. Chem. 252, 4418-4420] that the resonances at lowest field correspond to tertiary hydrogen-bonded 5-fluorouracils. Consideration of ring-current effects and the preferential perturbation of upfield 19F resonances by the cyclophotoaddition of 4'-(hydroxymethyl)-4,5',8-trimethylpsoralen, which is known to react most readily with pyrimidines in double-stranded regions, permits initial assignment of upfield resonances to 5-fluorouracils in helical stems.(ABSTRACT TRUNCATED AT 400 WORDS)