论二次抽样以矫正多样性统计偏差的经典、发展与应用

稀疏标准化是定量古生物工作中矫正多样性统计偏差的常用方法。相比基于样本大小的传统稀疏化,基于采样充分度的改进能更忠实反映多样性信息。然而一些案例对于稀疏化的适用性不够重视,尤其是改进的方法鲜有国内文献介绍。本文阐述了稀疏化的原理,强调了应用的注意事项和改进方法的优势。稀疏化的原理是从大小不同的样本中二次抽样出彼此“公平”的子样本,以比较其分类单元丰富度。传统方法据样本大小衡量公平,改进的方法据采样充分度评估公平,要求子样本在群落中代表的个体频率总和相等。两种思路均可通过计算机模拟多次重复二次抽样或公式推导来计算,已有PAST和iNext等软件可以实现。采样是否充分代表了古生物群落是有效应用该方法的首要前提。     

The complex genome and adaptive evolution of polyploid Chinese pepper (Zanthoxylum armatum and Zanthoxylum bungeanum)

Zanthoxylum armatum and Zanthoxylum bungeanum, known as ‘Chinese pepper’, are distinguished by their extraordinary complex genomes, phenotypic innovation of adaptive evolution and species-special metabolites. Here, we report reference-grade genomes of Z. armatum and Z. bungeanum. Using high coverage sequence data and comprehensive assembly strategies, we derived 66 pseudochromosomes comprising 33 homologous phased groups of two subgenomes, including autotetraploid Z. armatum. The genomic rearrangements and two whole-genome duplications created large (~4.5 Gb) complex genomes with a high ratio of repetitive sequences (>82%) and high chromosome number (2n = 4x = 132). Further analysis of the high-quality genomes shed lights on the genomic basis of involutional reproduction, allomones biosynthesis and adaptive evolution in Chinese pepper, revealing a high consistent relationship between genomic evolution, environmental factors and phenotypic innovation. Our study provides genomic resources and new insights for investigating diversification and phenotypic innovation in Chinese pepper, with broader implications for the protection of plants under severe environmental changes.     

Benzotriazole-Based Polymer Acceptor for High-Efficiency All-Polymer Solar Cells with High Photocurrent and Low Voltage Loss

The power conversion efficiencies (PCEs) of all-polymer solar cells (all-PSCs) have already exceeded 17%. However, the limited absorption range of an all-polymer system results in significantly reduced short-circuit current density (J_sc), which eventually influences the PCE improvement. To broaden the light absorption of polymer acceptors, herein, benzotriazole is introduced in the core unit of small molecule acceptors and thus two narrow-bandgap polymer acceptors named PTz-BO and PTz-C11 featuring the same molecular backbone and different side-chain length are synthesized. Compared with PTz-C11, the PTz-BO based-all PSCs deliver a slightly reduced J_sc, a large open-circuit voltage (V_oc) and a low voltage loss below 0.50 V. Moreover, ternary all-PSCs are constructed by introducing PTz-C11 as a guest component. Benefiting from the reduced recombination, improved exciton generation and dissociation, and balanced charge transport, a high efficiency of 16.58% is obtained for the ternary all-PSCs, with a high J_sc over 25 mA cm⁻² without sacrificing the V_oc. Such result represents the highest efficiency reported for benzotriazole-based all-PSCs in the literature thus far. This work demonstrates the great potential of benzotriazole for the synthesis of efficient narrow-bandgap polymer acceptors.     

内蒙古草原退化群落恢复演替的研究II. 恢复演替时间进程的分析

 根据内蒙古典型草原地带的羊草+大针茅草原退化变型一冷蒿群落封育12年(1983—1994)的动态监测数据进行分析,对群落恢复演替轨迹取得以下认识： 1．依据群落优势种的更替及主分量分析结果可将恢复演替过程划分为冷蒿优势阶段、冷蒿+冰草阶段、冰草优势阶段、羊草优势阶段。 2;退化草原群落在恢复演替过程中,群落生产力的变化表现出阶梯式跃变和亚稳态阶面相间的特点。第一次跃变发生在1984年,上升到第二个阶面,第二次跃变发生在1990年,进入了第三个阶面,已接近于原生群落的生产力。 3．群落生产力与水资源量的关系因恢复演替阶段不同而异。第一亚稳态时期,群落地上现存生物量大体处于166g·m-2的水平上,生长季降水量达176mm以上时,增加降水对群落生产力的提高不发生显著影响。第二亚稳态时期,群落生物量与降水量之间的相关性显著。可推算出群落于物质生产用水量介于1.1～1.6mm·g-1之间。此值在1.1mm·g-1时,群落对水资源的利用效率最高,而在1.6mm·g-1时群落生物量达到最大值。 4．在恢复演替进程中,群落密度的位点常数约为271.5株·m-2,循此常数上下波动,表现出拥挤与稀疏交替发生的过程,构成了恢复演替的节奏性变化。群落生物量的跃变与亚稳态的形成,以及群落密度的拥挤与稀疏交替作用是群落恢复演替的内在机制。恢复演替的速度,到第10年发生了1.78个半变的生态距离。5．草原退化群落恢复演替过程中,按照其节奏性及生产力跃变与亚稳态的规律,调控放牧利用强度或采取技术措施,调节群落拥挤和稀疏的交替过程可加速恢复演替进程。     

小麦中期染色体银染蛋白的分析

对小麦中期染色体中银染蛋白的大小、形状和分布频率进行图像分析,看到：染色体顺的银染蛋白以颗粒状的形式存在,其大小不同,分布不均匀,数量差异也较大;从形状来看,大的银粒为点状,小的银粒有的为点状,有的实际为短纤维状,结果表明：染色体骨架在小麦中是真实存在的,骨架蛋白以颗粒和纤维状的形式分布于整个染色体中。     

Structural and functional relationships of human DNA polymerases

A continuing theme of our laboraory, has been the understanding of human DNA polymerases at the structural level. We have purified DNA polymerases delta, epsilon and alpha from human placenta. Monoclonal antibodies to these polymerases were isolated and used as tools to study their immunochemical relationships. These studies have shown that while DNA polymerases delta, epsilon and alpha are discrete protiens, they must share common structural features by virtue of the ability of several of our monoclonal antibodies to exhibit cross-reactivity. A second approach we have taken is the molecular cloning of human DNA polymerase delta and epsilon. We have cloned the DNA polymerase delta cDNA, and this has allowed us to compare its primary structure to those of human polymerase alpha and other members of this polymerase family. Multiple sequence alignments have revealed that human DNA polymerase delta is also closely related to the herpes virus family of DNA polymerases. In situ hybridization has shown that the human DNA polymerase delta gene is localized to chromosome 19 q13.3–q13.4. In order to further determine the functional regions of the DNA polymerase δ structure we are currently expressing human pol δ inE. coli and baculovirus systems. Other work in our laboratory is directed toward examining the expression of DNA polymerase δ during the cell cycle.     

Chromosome organization revealed upon the decondensation of telophase chromosomes inAllium

Chromosomes of root tip cells ofAllium cepa andAllium sativum were studied in early, middle and late telophase to examine the organization of mitotic chromosomes, taking advantage of the naturally occurring chromosome dispersion during the process of decondensation in telophase. Longitudinal and transverse sections of telophase chromosomes viewed under the transmission electron microscope showed that mitotic chromosomes inAllium were composed of helically coiled 400–550 nm chromatin fibres. In some regions of the longitudinal sections, these chromatin fibres were seen to be orientated parallel to one another but formed roughly a right angle to the long axis of the chromosome. In transverse sections, the telophase chromosome appeared to have a hollow centre encircled by the 400–550 nm chromatin fibre which in turn was a hollow tube structure formed by the coiling of a thinner fibre of 170–200 nm. In addition, cross views of chromatin fibres of 170–200 nm and 50–70 nm were also identified in telophase chromosome preparations. These two organizational levels of chromatin fibres also showed a hollow centre. The process of decondensation of telophase chromosomes is described, and some morphological characteristics associated with the activities of chromosome decondensation are analysed. Based on the observations made onAllium chromosomes in this study, various models of chromosome organization are discussed.     

玛曲县植被覆被变化及其对环境要素的响应

植被覆被变化是气象要素和人类活动综合作用的结果,能够反映区域内生态系统的演替趋势。玛曲高寒生态区作为黄河上游重要的水源涵养和补给区,具有维持区域生物多样性和生态安全,保障经济社会健康发展的重要作用,因此厘清该区域植被变化与气候及人类活动等环境要素的相互关系有助于为玛曲县生态治理与恢复提供科学参考。鉴于此,以2000-2015年MODIS/NDVI数据为基础,结合同期气象与人类活动数据,应用趋势分析法、相关分析以及通径分析等方法,分析了玛曲县植被NDVI的时空变化规律,并详细探讨了气象要素和人类活动对植被覆被变化的影响。结果表明：（1）2000-2015年玛曲县NDVI呈波动上升趋势,上升速率为0.01015/10a;各土地利用/覆被类型中,增加幅度由大到小依次为高山稀疏植被、湿地、沙化草甸、山地疏林地、高寒草甸、亚高山硬叶灌丛、亚高山阔叶灌丛和高寒草原;增加面积占相应地类总面积比例由大到小分别是高山稀疏植被（75.57%）、山地疏林地（71.45%）、沙化草甸（71.18%）、湿地（70.66%）、高寒草甸（68.15%）、亚高山硬叶灌丛（66.96%）、亚高山阔叶灌丛（66.24%）和高寒草原（66.05%）;（2）气象要素中,气温与NDVI间具有显著正相关（P < 0.05）,是影响植被覆被的决定性因子,利于植被的生长与发育;降水与NDVI间相关不显著（P > 0.05）,对植被覆被的影响较小;（3）人类活动要素中,与放牧强度密切相关的大牲畜存栏数和羊存栏数是植被生长的主控因子,其中大牲畜存栏数呈显著的抑制作用（P < 0.05）,羊存栏数具有较强的促进作用（P < 0.05）;（4）通径分析发现,气温、大牲畜存栏数和羊存栏数的决定系数依次为0.3005,-0.0563和0.0128,说明气温对NDVI的综合作用强度最高、大牲畜存栏数次之,羊存栏数最低;此外,剩余通径系数为0.53。该数值较大,表明仍有部分对NDVI增加存在影响的环境要素未考虑到,需在今后的研究中给予关注。