Occurrence and spacing of ribosome recognition sites in mRNAs of chloroplasts from higher plants

A computer-aided search for potential ribosome recognition sequences of mRNAs from tobacco chloroplasts shows that more than 90% of mRNA species contain sequences upstream of the respective initiator codons, which allow base pairing with 3′-terminal sequences of small subunit rRNA. This complementarity in several cases involves 16 S rRNA sequences between the canonical CCUCC sequence and the 3′-terminal stem/loop structure. The distances between potential ribosome recognition sequences and initiator codons can be up to 25 nucleotides which is much greater when compared to the spacing of 7±2 nucleotides observed for the classical Shine-Dalgarno sequences in bacterial mRNAs.     

Demonstration of correlations between the 8 and 10 kHz atmospherics and the inflammatory reaction of rats after carrageenan injection

Between the mean daily density of 28 kHz atmospherics and the onset of epileptic fits there is a highly significant correlation coefficient (r) of 0.30; there is a negative coefficient of –0.20 between the fits and the mean daily density of 10 kHz atmospherics. The onset of heart infarction is correlated with 28 kHz atmospherics (r=0.15). Furthermore, we have discovered that sudden deafness is also correlated with certain configurations of atmospherics. In this paper we report the following correlation coefficients between the inflammatory reaction of rats to a carrageenan injection (rci) into a hind paw and the mean daily pulse rate of atmospherics of the same day:r=0.49 for the 8 kHz atmospherics (P<0.02) andr=0.44 for the 10 kHz atmospherics (P<0.04). The correlations between rci reaction and other atmospherics (12 and 28 kHz) are smaller and not significant. By the method of multiple linear regression we found a multipleR=0.54 between rci reaction and the 8 and 10 kHz atmospherics (the regression function for the rci reaction is 0.15+0.004×8 kHz+0.002×10 kHz,P<0.05).     

Structure and function of Y chromosomal DNA

The sequence organization of four different families of Y chromosomal repetitive DNA is characterized at three levels of spatial extension along the Y chromosome of Drosophila hydei. At the lowest level of resolution, DNA blot analysis of Y chromosomal fragments of different lengths and in situ hybridization experiments on metaphase chromosomes demonstrate the clustering of each particular sequence family within one defined region of the chromosome. At a higher level of resolution, family specific repeats can be detected within these clusters by crosshybridization within 10–20 kb long continuous stretches of cloned DNA in EMBL3 phages. At the highest level of resolution, detailed sequence analysis of representative subclones about 1 kb in length reveals a satellite-like head to tail arrangement of family specific degenerated subrepeats as the building scheme common to all four families. Our results provide the first comparative sequence analysis of three novel families of repetitive DNA on the long arm of the F chromosome of D. hydei. Additional data are presented which support the existence of two related subfamilies of repetitive DNA on the short arm of the Y chromosome.     

Die Bestandsentwicklung von Kleinv?geln in Mitteleuropa: Analyse von Fangzahlen

Zusammenfassung Im Mettnau-Reit-Illmitz-Programm (MRI-Programm) der Vogelwarte Radolfzell wurden von 1974–1983 auf drei Fangstationen in Süddeutschland, Norddeutschland und Ostösterreich (Abb. 1) 184 939 Vögel von 37 Kleinvogelarten gefangen. Die Fänge erfolgten jährlich während der gesamten Wegzugperiode von Ende Juni bis Anfang November an Durchzüglern in Japannetzen unter strikter und umfassender Standardisierung aller Fang- und Arbeitsmethoden. Die Fangzahlen (Tab. 1, Abb. 2–6) werden in fünf Regressionsanalysen (Tab. 2–9) auf systematische Änderungen untersucht.Von insgesamt 496 errechenbaren Koeffizienten waren 317 oder 63,9% negativ und nur 179 oder 38,1 % positiv. Bei 34 der 37 untersuchten Arten ließen sich signifikante Trends errechnen. Sie sind für 20 oder 54 % dieser Arten ausschließlich oder überwiegend negativ. 14 Arten zeigten mindestens auf zwei Stationen negative Trends. Nur für insgesamt 10 Arten ließen sich überwiegend positive Trends errechnen. Faßt man negative Trends und Tendenzen (Vorzeichen) zusammen, so ergibt sich für 26 oder 70 % der untersuchten Arten ein negatives Bild. Dieses stark negative Gewicht ist im statistischen Sinne keine zufällige Erscheinung. Da die Bestandszunahmen die Abnahmen nicht aufwiegen konnten, zeigten auch die jährlichen Gesamtfangzahlen aller drei Stationen negative Trends. Die mittlere jährliche Abnahme betrug auf den Stationen Mettnau, Reit und Illmitz etwa 1,6 %. Die Tendenzen und Trends der einzelnen Arten stimmen auf den drei Stationen weitgehend überein. Sie lassen für ihr Zustandekommen auf weitgehend gleichförmige Ursachen bei den durch Mitteleuropa wandernden Populationen schließen.Die Fangzahlen und Literaturdaten zeigen, daß beträchtliche Teile unserer Kleinvogelwelt von Rückgangserscheinungen betroffen sind, wie wir sie von vielen Großvogelarten seit langem kennen. Bei einer Reihe von Arten sind die Abnahmen gravierend und die jährlichen Fangzahlen inzwischen so niedrig, daß sich bei ihnen mit den in den 70er Jahren konzipierten Fanganlagen eine Reihe von Fragestellungen nicht mehr untersuchen lassen. Wir können der weiteren Entwicklung der Bestände unserer derzeit noch artenreichen Kleinvogelwelt — wie der vieler Großvögel — nur mit größter Sorge entgegensehen. Die Ursachen der Rückgänge sind weitgehend unbekannt, und demzufolge mangelt es fast vollständig an geeigneten Gegenmaßnahmen. Bisherige Schutzmaßnahmen haben die Rückgänge nicht aufhalten können. Künftiger Vogelschutz wird sich folglich weitergehender Maßnahmen bedienen müssen.

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The development of songbird populations in central Europe: Analysis of trapping data

Summary In the Mettnau-Reit-Illmitz-Program (MRI-Program) of the Vogelwarte Radolfzell 184 939 birds of 37 songbird species were caught in the period 1974–1983 on three trapping stations in S. and N. Germany and E. Austria (Fig. 1). Trapping of passage migrants in mist nets occurred annually from the end of June to the beginning of November, the entire autumn migratory period. All trapping and working methods were strictly and comprehensively standardized. The trapping figures (Tab. 1, Fig. 2–6) were analyzed with respect to systematic alterations to gain information about changes in the population levels of species migrating through central Europe. The investigation is based above all on five regression analyses (Tab. 2–9).The most important individual results are: out of a total of 496 coefficients which could be calculated 317 or 63.9 % were negative and only 179 or 38.1 % positive. For 34 of the 37 investigated species significant trends could be calculated. In 20 or 54 % of these species they were (exclusively or predominately) negative. 14 species showed negative trends at least at two stations. Mainly positive trends could be found in only 10 species. Taking negative trends and tendencies (negative signs) together, 26 or 70 % of the species were included. This strongly negative bias is not accidental in a statistical sense. Since the increases could not balance the declines, the annual trapping totals of all three stations also showed negative trends. The mean annual decline in the stations Mettnau, Reit and Illmitz was about 1.6 %. Trends and tendencies of the species show a high degree of agreement for the three stations. This suggests that in the species migrating through central Europe rather uniform factors control the population levels. From the most recent literature results, it appears that most of the species with declining trapping figures in the MRI-Program demonstrate decreases elsewhere.The trapping figures of the MRI-Program and data from the literature together clearly indicate that considerable parts of our small birds are affected by declines as have been known in many large bird species for long time. In a number of species the decreases have been quite dramatic and their annual trapping totals are now so low that a number of problems can no longer be studied. We should be alarmed when considering this negative development among our small birds as we must be with respect to many large bird species. The reasons for the declines are almost unkown and thus there is lack of appropriate counter-measures. Hitherto existing efforts for conservation which are briefly discussed have not been able to prevent the decline. Consequently, bird conservation in the future has to be based on more effective methods. Proposals, briefly raised, will be discussed in a forthcoming paper.

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Mit Unterstützung der Deutschen Forschungsgemeinschaft und gefördert mit Hilfe von Forschungsmitteln des Landes Niedersachsen. 15. Mitteilung aus dem MRI-Programm     

Chromogranin C: A Third Component of the Acidic Proteins in Chromaffin Granules

We characterized a group of acidic proteins of bovine chromaffin granules with an antiserum raised against a protein described by Rosa and Zanini [Eur. J. Cell Biol. 31, 94-98 (1983)] in pituitary gland. In adrenal medulla the proteins reacting with this antiserum are confined to chromaffin granules. Their largest component has a Mr of 86,000 and a pI of 5.0. In addition six proteins of lower molecular weight are recognized by this antiserum. In a cell-free system only one protein is synthesized that can be precipitated with this antiserum. The properties of these proteins are very similar to those of the previously described chromogranins A and B; however, there is no immunological cross-reaction between these protein groups. We suggest this third group of acidic proteins of chromaffin granules be named chromogranins C.     

Adaptation to High-Intensity, Low-Wavelength Light among Surface Blooms of the Cyanobacterium Microcystis aeruginosa

Natural populations of the nuisance bloom cyanobacterium Microcystis aeruginosa obtained from the eutrophic Neuse River, N.C., revealed optimal chlorophyll a-normalized photosynthetic rates and resistance to photoinhibition at surface photosynthetically active radiation (PAR) intensities. At saturating PAR levels these populations exhibited higher photosynthetic rates in quartz than in Pyrex vessels. Eucaryotic algal populations obtained from the same river failed to counteract photoinhibition. At saturating PAR levels, such populations generally yielded lower photosynthetic rates in quartz containers than they did in Pyrex containers. Cultivation of natural Microcystis populations under laboratory conditions led to physiologically distinct populations which had photoinhibitory characteristics similar to those of other cultured cyanobacterial and eucaryotic algae. Our findings indicate that (i) photosynthetic production among natural surface populations is best characterized and quantified in quartz rather than Pyrex incubation vessels; (ii) extrapolation of natural photoinhibitory trends from laboratory populations is highly subjective to culture and PAR histories and may yield contradictory results; and (iii) buoyant surface-dwelling populations, rather than exhibiting senescence, are poised at optimizing PAR utilization, thereby maintaining numerical dominance in eutrophic waters when physico-chemical conditions favor bloom formation.     

Coassimilation of dietary fat and benzo(a)pyrene in the small intestine: an absorption model using the killifish

Benzo(a)pyrene (BP) was dissolved in dietary fat and fed in a single dose to killifish (Fundulus heteroclitus). Fluorescence microscopic examinations of small intestinal content and frozen sections of whole small intestine revealed that during fat digestion BP was codispersed in liquid crystalline product phases produced during lipolysis (1979. Patton, J. S., and M. C. Carey, Science. 204: 145-148) and then coabsorbed with dietary lipid followed by its reappearance in intracellular fat droplets. During the time that the absorbed fat remained in the enterocytes, BP fluorescence was initially concentrated in the intracellular fat droplets and then spread throughout the cytosol of the enterocytes. Tissue analyses showed that BP was rapidly metabolized in the intestine and transported to the gallbladder. These studies show that separation of a dissolved hydrophobic carcinogen from dietary fat occurs primarily after the fat has been digested, dispersed, absorbed, and reassembled in the enterocyte. The inability of the enterocyte to discriminate between dietary fat and dissolved carcinogenic compounds may be a partial explanation of the observed link between high fat diets and the incidence of some cancers. In vertebrates, the intestine and not the liver, appears to be the major site of metabolism of dietary polycyclic aromatic hydrocarbons (PAHs).     

Application of fast atom bombardment mass spectrometry to chlorogenic acids

The technique of positive- and negative-ion fast atom bombardment mass spectrometry has been shown to be capable of producing molecular mass and useful fragmentation information for the structural elucidation of chlorogenic acids. The mass spectra of chlorogenic acid and the related compounds 3′-O-methylchlorogenic acid, neochlorogenic acid, 4,5-dicaffeoyl quinic acid and 1,5-dicaffeoyl quinic acid are compared with those obtained by electron impact mass spectrometry.     

k-Binding and Degradation of [3H]Dynorphin A (1–8) and [3H]Dynorphin A (1–9) in Suspensions of Guinea Pig Brain Membranes

Following incubation of [3H]dynorphin A (1-8) and [3H]dynorphin A (1-9) with suspensions of guinea pig brain membranes, analysis of the supernatants by HPLC has shown that both peptides are degraded at 25 degrees C and at 0 degrees C. Bestatin and captopril reduce degradation at 0 degrees C but for a similar degree of protection at 25 degrees C arginine-containing dipeptides are also required. The effects of these peptidase inhibitors on the degradation profiles indicate that [3H]dynorphin A (1-8) has three main sites of cleavage: the Tyr1-Gly2, Arg6-Arg7, and Leu5-Arg6 bonds. With [3H]dynorphin A (1-9) as substrate the Arg7-Ile8 and Ile8-Arg9 bonds are also liable to cleavage. In binding assays, in contrast to the effects of peptidase inhibitors on the degradation of unbound [3H]dynorphin A (1-8) and [3H]dynorphin A (1-9), bestatin and captopril have little effect on the binding characteristics of the tritiated dynorphin A fragments at the kappa-site at 0 degrees C. However, at 25 degrees C binding is low in the absence of peptidase inhibitors. When binding at mu- and delta-sites is prevented, the maximal binding capacities of [3H]dynorphin A (1-8), [3H]dynorphin A (1-9), and [3H](-)-bremazocine at the kappa-site are similar; [3H]dynorphin A (1-9) has 5-10 times higher affinity for the kappa-site than [3H]dynorphin A (1-8). Comparison of the effects of peptidase inhibitors on unbound dynorphin A fragments with their effects in binding assays suggests that the bound peptides are protected from the action of peptidases.