Temperatur- und osmotische Resistenz von Meeresalgen der bretonischen Küste

Ohne ZusammenfassungProfessor Dr. Karl Höfler zum 65. Geburtstag in dankbarer Verehrung gewidmet.     

Autophosphorylation of JAK2 on tyrosines 221 and 570 regulates its activity

The tyrosine kinase JAK2 is a key signaling protein for at least 20 receptors in the cytokine/hematopoietin receptor superfamily and is a component of signaling by insulin receptor and several G-protein-coupled receptors. However, there is only limited knowledge of the physical structure of JAK2 or which of the 49 tyrosines in JAK2 are autophosphorylated. In this study, mass spectrometry and two-dimensional peptide mapping were used to determine that tyrosines 221, 570, and 1007 in JAK2 are autophosphorylated. Phosphorylation of tyrosine 570 is particularly robust. In response to growth hormone, JAK2 was rapidly and transiently phosphorylated at tyrosines 221 and 570, returning to basal levels by 60 min. Analysis of the sequences surrounding tyrosines 221 and 570 in JAK2 and tyrosines in other proteins that are phosphorylated in response to ligands that activate JAK2 suggests that the YXX[L/I/V] motif is one of the motifs recognized by JAK2. Experiments using JAK2 with tyrosines 221 and 570 mutated to phenylalanine suggest that tyrosines 221 and 570 in JAK2 may serve as regulatory sites in JAK2, with phosphorylation of tyrosine 221 increasing kinase activity and phosphorylation of tyrosine 570 decreasing kinase activity and thereby contributing to rapid termination of ligand activation of JAK2.     

Passive multivariable temperature and conductivity RFID sensors for single-use biopharmaceutical manufacturing components

Single-use biopharmaceutical manufacturing requires monitoring of critical manufacturing parameters. We have developed an approach for passive radio-frequency identification (RFID)-based sensing that converts ubiquitous passive 13.56 MHz RFID tags into inductively coupled sensors. We combine several measured parameters from the resonant sensor antenna with multivariate data analysis and deliver unique capability of multiparameter sensing and rejection of environmental interferences with a single sensor. We demonstrate here the integration of these RFID sensors into single-use biopharmaceutical manufacturing components. We have tested these sensors for over 500 h for measurements of temperature and solution conductivity with the accuracy of 0.1°C (32-48°C range) and accuracy of 0.3-2.9 mS/cm (0.5-230 mS/cm range). We further demonstrate simultaneous temperature and conductivity measurements with an individual RFID sensor with the accuracy of 0.2°C (5-60°C range) and accuracy of 0.9 mS/cm (0.5-183 mS/cm range). Developed RFID sensors provide several important features previously unavailable from other single-use sensing technologies such as the same sensor platform for measurements of physical, chemical, and biological parameters; multi-parameter monitoring with individual sensors; and simultaneous digital identification.     

Temporal variations of the postnatal rat urinary proteome as a reflection of systemic maturation

The rat kidney matures during the first 2 wk of life, suggesting that temporal variations in the urinary proteome may occur during this period. We describe the urine proteome during postnatal development in the rat and demonstrate specific proteomic changes corresponding to developmental milestones. Urine was collected from 30 rats at five postnatal (P) days of life (P1, P3, P7, P14, and >P30) by bladder aspiration. The proteome was assessed by nano-ESI-LC-MS/MS. For identification, we used stringent criteria to provide a 1% false positive rate at the peptide level. The proteins in common at each time interval decreased during postnatal maturation. When comparing all five developmental times, six proteins were ubiquitously present. We detected 14 proteins involved with cellular adhesion, structure, or proliferation and differentiation only during neonatal development. Additionally, 30 proteins were specific to adults, of which 13 originated from the prostate or seminal vesicle. This is the first MS characterization of the normal urinary proteome in early postnatal rodent development that demonstrates distinct differences correlating with different stages of tissue maturation. Further characterization of the normal urinary proteome may provide the basis for identification of urinary biomarkers of diseases of the urinary tract.     

Climate-Driven Ichthyoplankton Drift Model Predicts Growth of Top Predator Young

Climate variability influences seabird population dynamics in several ways including access to prey near colonies during the critical chick-rearing period. This study addresses breeding success in a Barents Sea colony of common guillemots Uria aalge where trophic conditions vary according to changes in the northward transport of warm Atlantic Water. A drift model was used to simulate interannual variations in transport of cod Gadus morhua larvae along the Norwegian coast towards their nursery grounds in the Barents Sea. The results showed that the arrival of cod larvae from southern spawning grounds had a major effect on the size of common guillemot chicks at fledging. Furthermore, the fraction of larvae from the south was positively correlated to the inflow of Atlantic Water into the Barents Sea thus clearly demonstrating the mechanisms by which climate-driven bottom-up processes influence interannual variations in reproductive success in a marine top predator.     

Diffusion and Topological Neighbours in Flocks of Starlings: Relating a Model to Empirical Data

Moving in a group while avoiding collisions with group members causes internal dynamics in the group. Although these dynamics have recently been measured quantitatively in starling flocks (Sturnus vulgaris), it is unknown what causes them. Computational models have shown that collective motion in groups is likely due to attraction, avoidance and, possibly, alignment among group members. Empirical studies show that starlings adjust their movement to a fixed number of closest neighbours or topological range, namely 6 or 7 and assume that each of the three activities is done with the same number of neighbours (topological range). Here, we start from the hypothesis that escape behavior is more effective at preventing collisions in a flock when avoiding the single closest neighbor than compromising by avoiding 6 or 7 of them. For alignment and attraction, we keep to the empirical topological range. We investigate how avoiding one or several neighbours affects the internal dynamics of flocks of starlings in our computational model StarDisplay. By comparing to empirical data, we confirm that internal dynamics resemble empirical data more closely if flock members avoid merely their single, closest neighbor. Our model shows that considering a different number of interaction partners per activity represents a useful perspective and that changing a single parameter, namely the number of interaction partners that are avoided, has several effects through selforganisation.     

Tyrosine phosphorylation mapping of the epidermal growth factor receptor signaling pathway.

Phosphorylation is one of the most common forms of protein modification. The most frequent targets for protein phosphorylation in eukaryotes are serine and threonine residues, although tyrosine residues also undergo phosphorylation. Many of the currently applied methods for the detection and localization of protein phosphorylation sites are mass spectrometry-based and are biased against the analysis of tyrosine-phosphorylated residues because of the stability and low reactivity of phosphotyrosines. To overcome this lack of sensitive methods for the detection of phosphotyrosine-containing peptides, we have recently developed a method that is not affected by the more predominant threonine or serine phosphorylation within cells. It is based on the specific detection of immonium ion of phosphotyrosine at 216.043 Da and does not require prior knowledge of the protein sequence. In this report, we describe the first application of this new method in a proteomic strategy. Using anti-phosphotyrosine antibodies for immunoprecipitation and one-dimensional gel electrophoresis, we have identified 10 proteins in the epidermal growth factor receptor signaling pathway, of which 8 have been shown previously to be involved in epidermal growth factor signaling. Most importantly, in addition to several known tyrosine phosphorylation sites, we have identified five novel sites on SHIP-2, Hrs, Cbl, STAM, and STAM2, most of which were not predicted to be phosphorylated. Because of its sensitivity and selectivity, this approach will be useful in proteomic approaches to study tyrosine phosphorylation in a number of signal transduction pathways.     

Beobachtungen über das Vorkommen von Algen an Thermalstandorten auf Island

Zusammenfassung Es werden einige Warmwasserstandorte auf Island geschildert und Listen der in ihnen gefundenen Algen mitgeteilt. An anderem Ort veröffentlichte Versuche über die Wärmeresistenz einiger Grünalgen warmer Bäche Islands (Biebl, 1967) haben gezeigt, daß diese an ihren natürlichen Standorten beinahe die Grenze ihrer Wärmeresistenz und damit ihrer Lebensmöglichkeit erreichen. Chlorophyceen wurden bis zu Temperaturen von 32° C gefunden,Cosmarium botrytis var.mediolaeve auch noch in 35° C warmem Wasser. Diatomeen wurden lebend bei 35° C beobachtet, in den fixierten Proben aber auch noch bei 48° bis 55,5° C gefunden. Vor allemRhopalodia gibberula trat noch in diesen hoch temperierten Wässern auf. Es muß aber offen bleiben, ob diese im fixierten Material gefundenen Diatomeen am Standort noch lebend waren. Vielversprechend erschiene eine Untersuchung der oft eng benachbarten alkalischen und sauren Quelltümpel hinsichtlich der Artenzusammensetzung. So zeigte z. B.Pinnularia microstauron in Wässern mit einem ph von 5, 5–6, 5 bei Temperaturen zwischen 17,5° und 25° C ausgesprochene Massenentwicklung, während in gleich temperierten alkalischen Wässern andere Arten auftraten. Von den Cyanophyceen wurdeMastigodadus laminosus in einem Bereich von 20° C bis 60° C lebend gefunden. Von noch heißerem Wasser überrieselte Kieselsinterablagerungen enthielten zahlreiche verkieselte Blaualgenreste.     

Phylogenetics of <Emphasis Type="Italic">Cucumis</Emphasis> (Cucurbitaceae): Cucumber (<Emphasis Type="Italic">C. sativus</Emphasis>) belongs in an Asian/Australian clade far from melon (<Emphasis Type="Italic">C. melo</Emphasis>)

Background  

Melon, Cucumis melo, and cucumber, C. sativus, are among the most widely cultivated crops worldwide. Cucumis, as traditionally conceived, is geographically centered in Africa, with C. sativus and C. hystrix thought to be the only Cucumis species in Asia. This taxonomy forms the basis for all ongoing Cucumis breeding and genomics efforts. We tested relationships among Cucumis and related genera based on DNA sequences from chloroplast gene, intron, and spacer regions (rbcL, matK, rpl20-rps12, trnL, and trnL-F), adding nuclear internal transcribed spacer sequences to resolve relationships within Cucumis.     

Escherichia coli alpha-haemolysin induces focal leaks in colonic epithelium: a novel mechanism of bacterial translocation

Extraintestinal pathogenic Escherichia coli (ExPEC) are usually harmless colonizer of the intestinal microflora. However, they are capable to translocate and cause life-threatening disease. Translocation of ExPEC isolates was quantified in colonic monolayers. Transepithelial resistance (R(t)) was monitored and local changes in conductivity analysed with conductance scanning. Confocal microscopy visualized the translocation route. Corroboratory experiments were performed on native rat colon. One translocating strain E. coli O4 was identified. This translocation process was associated with an R(t) decrease (36 +/- 1% of initial resistance) beginning only 2 h after inoculation. The sites of translocation were small defects in epithelial integrity (focal leaks) exhibiting highly increased local ion permeability. Translocation was enhanced by preincubation of monolayers with tumour necrosis factor-alpha or interleukin-13. Mutant strains lacking alpha-haemolysin lost the ability to induce focal leaks, while this effect could be restored by re-introducing the haemolysin determinant. Filtrate of a laboratory strain carrying the alpha-haemolysin operon was sufficient for focal leak induction. In native rat colon, E. coli O4 decreased R(t) and immunohistology demonstrated focal leaks resembling those in cell monolayers. E. coli alpha-haemolysin is able to induce focal leaks in colonic cell cultures as well as in native colon. This process represents a novel route of bacterial translocation facilitated by pro-inflammatory cytokines.