2001—2009年中国碳排放与碳足迹时空格局

碳排放引发的全球变暖给自然环境及人类社会都带来了显著影响,而碳足迹可以衡量自然生态系统对人类活动碳排放的响应。为研究自然-社会二元系统碳动态,基于MODIS(Moderate Resolution Imaging Spectroradiometer)数据和统计资料计算2001—2009年中国陆地植被净初级生产力、能源消费碳排放、碳足迹和碳赤字;在GIS(Geographic Information System)技术支持下,运用空间自相关分析方法讨论其时空格局;据此划分生态经济区。结果表明:(1)2001—2009年全国植被净初级生产力(Net Primary Production,NPP)平均值为3.32 Pg C/a(1 Pg=1015g),呈西南地区东南沿海华中、华东地区东北、华北地区西北地区的空间格局;(2)2001—2009年全国能源消费碳排放逐年增加,年均增长率16.7%,多年平均值2.53 Pg C/a,呈东部中部西部的空间格局;(3)2001—2009年全国碳足迹逐年增加,年均增长率14.7%,多年平均值6.98×106km2;具有正碳赤字(即碳源)的省份为山西、环渤海地区各省、长三角地区各省、广东;相邻省份碳赤字的相对大小由于互相影响而改变;(4)全国分为中东部、南部、北部、西部四个生态经济大区。研究结果直观揭示了中国碳排放和碳足迹的时空动态,为实现自然-社会二元系统的可持续发展提供科学依据。     

Genomics and biochemistry investigation on the metabolic pathway of milled wood and alkali lignin-derived aromatic metabolites of <Emphasis Type="Italic">Comamonas serinivorans</Emphasis> SP-35

Background

The efficient depolymerization and utilization of lignin are one of the most important goals for the renewable use of lignocelluloses. The degradation and complete mineralization of lignin by bacteria represent a key step for carbon recycling in land ecosystems as well. However, many aspects of this process remain unclear, for example, the complex network of metabolic pathways involved in the degradation of lignin and the catabolic pathway of intermediate aromatic metabolites. To address these subjects, we characterized the deconstruction and mineralization of lignin with milled wood lignin (MWL, the most representative molecule of lignin in its native state) and alkali lignin (AL), and elucidated metabolic pathways of their intermediate metabolites by a bacterium named Comamonas serinivorans SP-35.

Results

The degradation rate of MWL reached 30.9%, and its particle size range was decreased from 6 to 30 µm to 2–4 µm—when cultured with C. serinivorans SP35 over 7 days. FTIR analysis showed that the C–C and C–O–C bonds between the phenyl propane structures of lignin were oxidized and cleaved and the side chain structure was modified. More than twenty intermediate aromatic metabolites were identified in the MWL and AL cultures based on GC–MS analysis. Through genome sequencing and annotation, and from GC–MS analysis, 93 genes encoding 33 enzymes and 5 regulatory factors that may be involved in lignin degradation were identified and more than nine metabolic pathways of lignin and its intermediates were predicted. Of particular note is that the metabolic pathway to form the powerful antioxidant 3,4-dihydroxyphenylglycol is described for the first time in bacteria.

Conclusion

Elucidation of the β-aryl ether cleavage pathway in the strain SP-35 indicates that the β-aryl ether catabolic system is not only present in the family of Sphingomonadaceae, but also other species of bacteria kingdom. These newly elucidated catabolic pathways of lignin in strain SP-35 and the enzymes responsible for them provide exciting biotechnological opportunities for lignin valorization in future.

     

Cell wall targeted in planta iron accumulation enhances biomass conversion and seed iron concentration in Arabidopsis and rice

Conversion of nongrain biomass into liquid fuel is a sustainable approach to energy demands as global population increases. Previously, we showed that iron can act as a catalyst to enhance the degradation of lignocellulosic biomass for biofuel production. However, direct addition of iron catalysts to biomass pretreatment is diffusion‐limited, would increase the cost and complexity of biorefinery unit operations and may have deleterious environmental impacts. Here, we show a new strategy for in planta accumulation of iron throughout the volume of the cell wall where iron acts as a catalyst in the deconstruction of lignocellulosic biomass. We engineered CBM‐IBP fusion polypeptides composed of a carbohydrate‐binding module family 11 (CBM11) and an iron‐binding peptide (IBP) for secretion into Arabidopsis and rice cell walls. CBM‐IBP transformed Arabidopsis and rice plants show significant increases in iron accumulation and biomass conversion compared to respective controls. Further, CBM‐IBP rice shows a 35% increase in seed iron concentration and a 40% increase in seed yield in greenhouse experiments. CBM‐IBP rice potentially could be used to address iron deficiency, the most common and widespread nutritional disorder according to the World Health Organization.     

Enhanced phosphorus nutrition in monocots and dicots over-expressing a phosphorus-responsive type I H+-pyrophosphatase

Plants challenged by limited phosphorus undergo dramatic morphological and architectural changes in their root systems in order to increase their absorptive surface area. In this paper, it is shown that phosphorus deficiency results in increased expression of the type I H⁺-pyrophosphatase AVP1 (AVP, Arabidopsis vacuolar pyrophosphatase), subsequent increased P-type adenosine triphosphatase (P-ATPase)-mediated rhizosphere acidification and root proliferation. Molecular genetic manipulation of AVP1 expression in Arabidopsis , tomato and rice results in plants that outperform controls when challenged with limited phosphorus. However, AVP1 over-expression and the resulting rhizosphere acidification do not result in increased sensitivity to AlPO₄, apparently because of the enhancement of potassium uptake and the release of organic acids. Thus, the over-expression of type I H⁺-pyrophosphatases appears to be a generally applicable technology to help alleviate agricultural losses in low-phosphorus tropical/subtropical soils and to reduce phosphorus runoff pollution of aquatic and marine environments resulting from fertilizer application.     

Effects of water depth and substrate type on growth dynamics and biomass allocation of Oryza rufipogon

Oryzarufipogon is known as the ancestor of Asian cultivated rice (Oryzasativa) and the most important germplasm for rice improvement. In this study, we investigated its growth and biomass allocation in response to water depth and substrate type. The results demonstrated that individual plant had an average weight of 18.98 g, 9.36 g, and 10.59 g and produced 77.7 seeds, 35.5 seeds, and 41.6 seeds in deep-, fluctuated-, and shallow water, respectively. Root-to-shoot ratios were 0.37 in deep water, 0.61 in fluctuated water level, and 0.56 in shallow water, reflecting larger investment in roots under water-level fluctuation and shallow water conditions. However, biomass allocation for sexual reproduction was no significant different among the three water levels. In substrates experiment, total biomass and seed production were significantly different between sediment types, and the averages were 10.59 g, 3.56 g, and 0.76 g in biomass and 41.6 seeds, 13.8 seeds, and 0.5 seeds per plant in lake sediment, river sand and clay, respectively. The number of tillers was significantly fewer in sandy and clay substrates than in lake sediments. Individual plant in clay substrates was significantly shorter than those in sandy and in lake sediment substrates. Our study suggests that the plasticity in morphology and biomass allocation of O.rufipogon appears to be an adaptation to the variability in water level and substrate conditions.     

Tuning the fluorescence response of surface modified CdSe quantum dots between tyrosine and cysteine by addition of p-sulfonatocalix[4]arene.

A simple identification method of L-tyrosine (Tyr) and L-cysteine (Cys) using gemini surfactant coated CdSe quantum dots by using a fluorescent spectroscopic technique is proposed. The gemini surfactant modified QDs show a selective fluorescence response between Tyr and Cys by addition of p-sulfonatocalix[4]arene (pSCA). The CdSe QDs coated with gemini surfactant [C(12)H(25)N(+)(CH(3))(2)(CH(2))(4)(CH(3))(2)N(+)C(12)H(25)].2Br(-) (GS) obviously responds to Tyr. While in the presence of pSCA, it shows selectivity to Cys due to the cooperation of gemini surfactant coated QDs (GS-QDs) and pSCA. Under optimal conditions, it is found that the luminescence of the GS-QDs enhanced by Tyr in a concentration-dependent fashion is described by a Langmuir binding isotherm equation in the range 5 x 10(-8)-10(-5) M. In the presence of pSCA, the luminescence of the GS-QDs enhanced by Cys in a concentration-dependent fashion can also be described by a Langmuir binding isotherm equation in the range 10(-8)-10(-4) M. The possible mechanism is discussed.     

Novel mutations in the<Emphasis Type="Italic"> IRF6</Emphasis> gene for Van der Woude syndrome

Van der Woude syndrome (VWS, OMIM 119300) is an autosomal dominant craniofacial disorder characterized by pits of the lower lip, hypodontia, and cleft lip and/or cleft palate. It is the most common form of syndromic orofacial clefting and has very high penetrance with varied expressivity. The disease locus for VWS has been mapped to a 1.6-cM region on 1q32–41 between D1S205 and D1S491. Recently, mutations have been found in the interferon regulatory factor 6 (IRF6) gene in patients with VWS and popliteal pterygium syndrome. To identify novel mutations of IRF6 in VWS patients, we screened four Chinese VWS families in all nine exons and their flanking splice junctions by direct sequencing. We identified three missense mutations and one nonsense mutation in IRF6. Our study further confirmed that IRF6 is essential for craniofacial development.X. Wang and J. Liu contributed equally to this work     

油茶皂素化学和物理特性及其开发利用研究

油茶皂素学名茶皂角甙,结构糖是由葡萄糖醛酸,阿拉伯糖,木糖及半乳糖组成,结构酸是由反（顺）白芷酸及醋酸组成。茶皂角甙是由结构相似５─７种三萜类皂甙元构成。油茶皂素的表面活性主要是结构一端为疏水的脂肪酸基团,另一端为结构糖,结构酸亲水基团,吸附和胶团化,使皂素可用来做乳化剂,洗涤剂,发泡剂,分散剂,润湿剂,洗发剂,清洗剂,柔软剂等。     

Job Sharing in the Endomembrane System: Vacuolar Acidification Requires the Combined Activity of V-ATPase and V-PPase

The presence of a large central vacuole is one of the hallmarks of a prototypical plant cell, and the multiple functions of this compartment require massive fluxes of molecules across its limiting membrane, the tonoplast. Transport is assumed to be energized by the membrane potential and the proton gradient established by the combined activity of two proton pumps, the vacuolar H⁺-pyrophosphatase (V-PPase) and the vacuolar H⁺-ATPase (V-ATPase). Exactly how labor is divided between these two enzymes has remained elusive. Here, we provide evidence using gain- and loss-of-function approaches that lack of the V-ATPase cannot be compensated for by increased V-PPase activity. Moreover, we show that increased V-ATPase activity during cold acclimation requires the presence of the V-PPase. Most importantly, we demonstrate that a mutant lacking both of these proton pumps is conditionally viable and retains significant vacuolar acidification, pointing to a so far undetected contribution of the trans-Golgi network/early endosome-localized V-ATPase to vacuolar pH.