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951.
Ly Diane Dongol Anjila Cuthbertson Peter Guy Thomas V. Geraghty Nicholas J. Sophocleous Reece A. Sin Lucia Turner Bradley J. Watson Debbie Yerbury Justin J. Sluyter Ronald 《Purinergic signalling》2020,16(1):109-122
Purinergic Signalling - The ATP-gated P2X7 ion channel has emerging roles in amyotrophic lateral sclerosis (ALS) progression. Pharmacological blockade of P2X7 with Brilliant Blue G can ameliorate... 相似文献
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Background and AimsGlobal plant trait datasets commonly identify trait relationships that are interpreted to reflect fundamental trade-offs associated with plant strategies, but often these trait relationships are not identified when evaluating them at smaller taxonomic and spatial scales. In this study we evaluate trait relationships measured on individual plants for five widespread Protea species in South Africa to determine whether broad-scale patterns of structural trait (e.g. leaf area) and physiological trait (e.g. photosynthetic rates) relationships can be detected within natural populations, and if these traits are themselves related to plant fitness.MethodsWe evaluated the variance structure (i.e. the proportional intraspecific trait variation relative to among-species variation) for nine structural traits and six physiological traits measured in wild populations. We used a multivariate path model to evaluate the relationships between structural traits and physiological traits, and the relationship between these traits and plant size and reproductive effort.Key ResultsWhile intraspecific trait variation is relatively low for structural traits, it accounts for between 50 and 100 % of the variation in physiological traits. Furthermore, we identified few trait associations between any one structural trait and physiological trait, but multivariate regressions revealed clear associations between combinations of structural traits and physiological performance (R2 = 0.37–0.64), and almost all traits had detectable associations with plant fitness.ConclusionsIntraspecific variation in structural traits leads to predictable differences in individual-level physiological performance in a multivariate framework, even though the relationship of any particular structural trait to physiological performance may be weak or undetectable. Furthermore, intraspecific variation in both structural and physiological traits leads to differences in plant size and fitness. These results demonstrate the importance of considering measurements of multivariate phenotypes on individual plants when evaluating trait relationships and how trait variation influences predictions of ecological and evolutionary outcomes. 相似文献
954.
Nir Hecht Caroline L Monteil Guy Perrire Marina Vishkautzan Eyal Gur 《Molecular biology and evolution》2021,38(3):761
The understanding of how proteins evolve to perform novel functions has long been sought by biologists. In this regard, two homologous bacterial enzymes, PafA and Dop, pose an insightful case study, as both rely on similar mechanistic properties, yet catalyze different reactions. PafA conjugates a small protein tag to target proteins, whereas Dop removes the tag by hydrolysis. Given that both enzymes present a similar fold and high sequence similarity, we sought to identify the differences in the amino acid sequence and folding responsible for each distinct activity. We tackled this question using analysis of sequence–function relationships, and identified a set of uniquely conserved residues in each enzyme. Reciprocal mutagenesis of the hydrolase, Dop, completely abolished the native activity, at the same time yielding a catalytically active ligase. Based on the available Dop and PafA crystal structures, this change of activity required a conformational change of a critical loop at the vicinity of the active site. We identified the conserved positions essential for stabilization of the alternative loop conformation, and tracked alternative mutational pathways that lead to a change in activity. Remarkably, all these pathways were combined in the evolution of PafA and Dop, despite their redundant effect on activity. Overall, we identified the residues and structural elements in PafA and Dop responsible for their activity differences. This analysis delineated, in molecular terms, the changes required for the emergence of a new catalytic function from a preexisting one. 相似文献
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Many ecological community dynamics display some degree of directionality, known as succession patterns. But complex interaction networks frequently tend to non-directional dynamics such as chaos, unless additional structures or mechanisms impose some form of, often fragile or shot-lived, directionality. We exhibit here a novel property of emergent long-lasting directionality in competitive communities, which relies on very minimal assumptions. We model communities where each species has a few strong competitive interactions, and many weak ones. We find that, at high enough diversity, the dynamics become directional, meaning that the community state can be characterized by a function that increases in time, which we call ‘maturity'. In the presence of noise, the community composition changes toward increasingly stable and productive states. This scenario occupies a middle ground between deterministic succession and purely random species associations: there are many overlapping stable states, with stochastic transitions, that are nevertheless biased in a particular direction. When a spatial dimension is added in the form of a meta-community, higher-maturity community states are able to expand in space, replacing others by (exact or approximate) copies of themselves. This leads to community-level selection, with the same maturity function acting as fitness. Classic concepts from evolutionary dynamics provide a powerful analogy to understand this strictly ecological, community-level phenomenon of emergent directionality. 相似文献
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Tra-My N. Duong Thanh-Van Le Khanh-Linh H. Tran Phuong-Tuyen Nguyen Bich-Phuong T. Nguyen Thu-Anh Nguyen Huong-Lan P. Nguyen Bich-Ngoc T. Nguyen Matthew C. Fisher Johanna Rhodes Guy Marks Greg J. Fox Sharon C.-A. Chen Michael G. Walsh Vanessa R. Barrs Jessica Talbot Catriona L. Halliday Tania C. Sorrell Jeremy N. Day Justin Beardsley 《Environmental microbiology》2021,23(12):7632-7642
Azole-resistant environmental Aspergillus fumigatus presents a threat to public health but the extent of this threat in Southeast Asia is poorly described. We conducted environmental surveillance in the Mekong Delta region of Vietnam, collecting air and ground samples across key land-use types, and determined antifungal susceptibilities of Aspergillus section Fumigati (ASF) isolates and azole concentrations in soils. Of 119 ASF isolates, 55% were resistant (or non-wild type) to itraconazole, 65% to posaconazole and 50% to voriconazole. Azole resistance was more frequent in A. fumigatus sensu stricto isolates (95%) than other ASF species (32%). Resistant isolates and agricultural azole residues were overrepresented in samples from cultivated land. cyp51A gene sequence analysis showed 38/56 resistant A. fumigatus sensu stricto isolates carried known resistance mutations, with TR34/L98H most frequent (34/38). 相似文献
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Pneumonia is the inflammation of the lungs and it is the world’s leading cause of death for children under 5 years of age.The latest coronavirus disease 2019(COVID-19)virus is a prominent culprit to severe pneumonia.With the pandemic running rampant for the past year,more than 1590000 deaths has occurred worldwide up to December 2020 and are substantially attributable to severe pneumonia and induced cytokine storm.Effective therapeutic approaches in addition to the vaccines and drugs under development are hence greatly sought after.Therapies harnessing stem cells and their derivatives have been established by basic research for their versatile capacity to specifically inhibit inflammation due to pneumonia and prevent alveolar/pulmonary fibrosis while enhancing antibacterial/antiviral immunity,thus significantly alleviating the severe clinical conditions of pneumonia.In recent clinical trials,mesenchymal stem cells have shown effectiveness in reducing COVID-19-associated pneumonia morbidity and mortality;positioning these cells as worthy candidates for combating one of the greatest challenges of our time and shedding light on their prospects as a nextgeneration therapy to counter future challenges. 相似文献
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