土壤水解酶类催化动力学研究进展

土壤水解酶是存在于土壤中的一种重要的酶类,参与了土壤中为数众多的重要生物化学反应,与土壤中多种营养元素转化密切相关其催化反应的动力学研究常用来阐明其催化过程的特性、酶的本质属性及其对环境变化的响应等,研究土壤水解酶动力学特征对探讨其来源、性质及影响因素,对进一步调控多种营养元素参与的反应过程有着重要意义。文中概述了土壤水解酶的种类及其参与的生物化学反应;探讨了土壤水解酶动力学研究的理论基础;综述了土壤水解酶催化动力学研究的进展和影响因素,在此基础上,对今后研究提出了几点建议。     

Variation in the significant environmental factors affecting larval abundance of four major Chinese carp species: fish spawning response to the Three Gorges Dam

相似文献   

Structure-based substitutions for increased solubility of a designed protein

Manipulation of protein solubility is important for many aspects of protein design and engineering. Previously, we designed a series of consensus ankyrin repeat proteins containing one, two, three and four identical repeats (1ANK, 2ANK, 3ANK and 4ANK). These proteins, particularly 4ANK, are intended for use as a universal scaffold on which specific binding sites can be constructed. Despite being well folded and extremely stable, 4ANK is soluble only under acidic conditions. Designing interactions with naturally occurring proteins requires the designed protein to be soluble at physiological pH. Substitution of six leucines with arginine on exposed hydrophobic patches on the surface of 4ANK resulted in increased solubility over a large pH range. Study of the pH dependence of stability demonstrated that 4ANK is one of the most stable ankyrin repeat proteins known. In addition, analogous leucine to arginine substitutions on the surface of 2ANK allowed the partially folded protein to assume a fully folded conformation. Our studies indicate that replacement of surface-exposed hydrophobic residues with positively charged residues can significantly improve protein solubility at physiological pH.     

Analysis of ribosomal DNA restriction patterns in the genusKluyveromyces

Riboprinting was used to determine the relationships among strains belonging to 15 species of the genusKluyveromyces. The small subunit ribosomal RNA gene (SSU rDNA) was amplified using the Polymerase Chain Reaction (PCR) and subjected to a battery of nine restriction enzymes. Similarity coefficients between strains were calculated based on shared and unique restriction fragments. Cluster analysis revealed three major groups that generally correlated with previously reported relationships based on other molecular data. Variations in SSU rDNA restriction fragments may be used for differentiation of theKluyveromyces strains included in this study.The U.S. Government right to retain a non-exclusive, royalty free licence in and to any copyright is acknowledged.     

丹霞地貌沟谷生态效应

以广东省丹霞山为研究实例,探讨丹霞地貌特殊的沟谷生态效应.结果表明,丹霞地貌的特殊沟谷生态效应体现在以下两个方面:第一是丹霞地貌演变过程中形成了众多石峰隆起和沟谷凹陷,特殊的地貌环境使得沟谷中的生态因子与其它非丹霞地貌开阔区域产生差异,小气候相对封闭,水湿条件极好,为喜高温高湿的热带物种提供了较好的生存环境;沟谷所处位置的地理环境,如四周崖壁的光滑程度会影响到太阳光反射到沟谷的光强,这些都会对沟谷中的温湿度产生影响.第二是丹霞地貌特殊的生态条件,为沟谷地带孕育出一批热带性较强的分类群提供了可能,与相近纬度的诸多植被相比,丹霞地貌植物区系热带性明显增强,热带分布区类型所占比重比同纬度区域要大10%以上,大多数沟谷中热带性物种分布现象比较明显,藤本分布较多,蕨类植物也较丰富,耐水湿的植物区系发育良好;这实际上造成了植物水平分布上的移位,使中亚热带区域中分布有南亚热带甚至热带区域的物种,出现了由于其特殊的沟谷地貌效应而形成的与其地貌条件保持协调和平衡的演替顶级群落类型,称为地貌顶级群落.     

毕氏海蓬子SbDREB基因的克隆与表达分析研究

以毕氏海蓬子的基因组为模板,通过PCR技术扩增到一个编码DREB蛋白AP2保守结构域的基因片段;根据该片段序列设计引物,以毕氏海蓬子经NaCl处理的植株肉质茎cDNA为模板,应用RACE技术获得该基因的cDNA全长,命名为SbDREB(GenBank登录号:JF894301)。SbDREB基因cDNA全长1206bp,包含一个编码284个氨基酸的完整开放阅读框。对氨基酸序列比对分析表明,该蛋白在靠近N端具有典型的AP2/EREBP保守结构域,且该结构域与一些高等植物DREB类转录因子的AP2区域具有高度同源性。进化树分析表明SbDREB属于DREB亚家族中的A-6亚族。实时荧光定量PCR结果显示:干旱、高盐和ABA能够诱导其表达,而低温则使其表达下调,表明该基因在毕氏海蓬子植株对干旱、盐和低温等非生物胁迫的应答中起作用。     

Lipidomic changes during different growth stages of Nitzschia closterium f. minutissima

Ultra Performance Liquid Chromatography-Electrospray ionization-Quadrupole-Time of Flight Mass Spectrometry (UPLC-ESI-Q-TOF–MS) is a powerful lipidomic tool. In this study, we developed a UPLC/Q-TOF–MS based method to investigate the lipid metabolomic changes in different growth phases of Nitzschia closterium f. minutissima. The data classification and biomarker selection were carried out by using multivariate statistical analysis, including principal components analysis (PCA), projection to latent structures with discriminant analysis (PLS-DA), and orthogonal projection to latent structures with discriminant analysis (OPLS-DA). We discovered that the intercellular lipid metabolites were significantly different among exponential, early stationary and late stationary phases. Thirty-one lipid molecules were selected and identified as putative biomarkers, including free fatty acid, Harderoporphyrin, phosphatidylglycerol, 1,2-diacyglycerl-3-O-4′-(N,N-trimethy)-homoserine, triacylglycerol, cholesterol, sulfoquinovosyldiacylglycerol, lyso-sulfoquinovosyldiacylglycerol, monogalactosyldiacylglycerol, digalactosyldiacylglycerol and lyso-digalactosyldiacylglycerol. These lipids have been shown previously to function in energy storage, membrane stability and photosynthesis efficiency during the growth of diatoms. Further analysis on the putative biomarkers demonstrated that nitrate starvation played critical role in the transition from exponential phase to stationary phase in N. closterium. This study is the first one to explore the lipidomic changes of microalgae in different growth phases, which promotes better understanding of their physiology and ecology.     

Aptamer selection for the detection of Escherichia coli K88

In this study, the first group of single-stranded DNA aptamers that are highly specific to enterotoxigenic Escherichia coli (ETEC) K88 was obtained from an enriched oligonucleotide pool by the SELEX (Systematic Evolution of Ligands by Exponential Enrichment) procedure, during which the K88 fimbriae protein was used as the target and bovine serum albumin as counter targets. These aptamers were applied successfully in the detection of ETEC K88. They were then grouped under different families based on the similarity of their secondary structure and the homology of their primary sequence. Four sequences from different families were deliberately chosen for further characterization by fluorescence analysis. Having the advantage of high sensitivity, fluorescence photometry was selected as single-stranded DNA quantification method during the SELEX process. Aptamers with the highest specificity and affinity were analyzed to evaluate binding ability with E. coli. Since ETEC K88 is the only type of bacterium that expressed abundant K88 fimbriae, the selected aptamers against the K88 fimbriae protein were able to specifically identify ETEC K88 among other bacteria. This method of detecting ETEC K88 by aptamers can also be applied to bacteria other than ETEC K88.     

福建南亚热带雨林封禁30年的群落特征

福建南靖县和溪南亚热带雨林,是我国南亚热带东段境内目前保存较完整的地带性植被类型之一,是福建南亚热带的代表植被［１,２］,于１９６２年起由国家对其作永久性封禁,今为福建省自然保护区。现将该群落特征作定量分析,并与１９６５年的群落特征［３］进行全面比较...