Personalisierte Medizin – Vision oder Fiktion? Beispiel: Altersdiabetes

Typical civilization diseases, such as type II diabetes, are common, complex in the underlying pathogenic mechanisms, heterogenous in the phenotype and multifactorial due to a wide variety of possible combinations of disease susceptibility or protective genes in different relevant tissues and negative or positive environmental factors. This is in sharp contrast to classical inherited diseases, such as Chorea Huntington, which are often caused by complete loss‐ or gain‐of‐function mutations in a single gene. The causative polymorphisms of susceptibility genes, however, are characterized by relative subtle alterations in the function of the corresponding gene product, which per se do not support the pathogenesis, by high frequency, high expenditure for their identification and rather low predictive value. Consequently, the reliable and early diagnosis of civilization diseases depends on the individual determination of all (or as many as possible) polymorphisms of each susceptibility gene together with the corresponding gene products and the metabolites emerging thereof.     

Enhancement of citrus resistance to the Mediterranean fruit fly

Precolorbreak treatment of Marsh grapefruit and Shamouti and Valencia oranges with 20 or 50 ppm gibberellic acid (GA) reduced fruit susceptibility to laboratory infestation by Ceratitis capitata (Wiedemann). Treatment effects were dose-dependent and the benefits were most pronounced with the orange cultivars. The implications of these findings are discussed in relation to use of GA treatment for improved fruit fly control in citrus.

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Zusammenfassung In den hier beschriebenen Versuchen wurde untersucht, wie weit durch die Anwendung von Gibberilinsäure (GA) im Freiland die Resistenz von Pampelmuse (Marsh), sowie von Shamoutiund Valencia-Orangen gegenüber Befall durch die Mittelmeerfruchtfliege, Ceratitis capitata (Wiedemann) gesteigert werden kann.In den Jahren 1982/83 spritzten wir in Israel Bäume dieser drei Zitrusarten mit GA in den Konzentrationen von 5 ppm und 50 ppm zu zwei verschiedenen Zeitpunkten vor dem Farbumschlag der Früchte (September, Oktober). Die so behandelten Früchte wurden anschliessend während der Reifeperiode in verschiedenen Zeitpunkten adulten Mittelmeerfruchtfliegen für die Eiablage dargeboten. Diese Exposition wurde sowohl im Freiland mit Früchten am Baum sowie im Laboratorium mit gepflückten Früchten durchgeführt. Untersucht wurde einerseits die Anfälligkeit resp. Resistenz der Früchte bezüglich der Eiablage, andererseits die Entwicklung der Larven in den Früchten.Wir stellten fest, dass die Behandlung mit GA bei Pampelmuse in Abhängigkeit vom Zeitpunkt und Konzentration der Behandlung eine gewisse erhöhte Befallsresistenz bewirken konnte. Bezüglich der beiden geprüften Orangensorten konnten wegen ungünstigen Witterungsbedingungen während der Reifezeit keine schlüssigen Befunde erarbeitet werden.Im Winterhalbjahr 1983/84 wurden Bäume aller drei Zitrussorten vor dem Farbwechsel der Früchte mit 20 ppm und 50 ppm GA behandelt. Um den negativen Einfluss der Witterung in den Expositionsversuchen auszuschalten, wurden die Versuchsfrüchte den Fruchtfliegen während der Reifeperiode ausschliesslich im Laboratorium dargeboten. In dieser Versuchsperiode stellten wir auch bei Orangen eine erhöhte Widerstandsfähigkeit gegen Fruchtfliegenbefall fest, und zwar in erhöhtem Ausmass bei Valencia-Orangen. Gleichzeitig beobachteten wir eine stark verzögerte Entwicklung des Farbwechsels von grün auf orange als Folge der hohen GA-Konzentration.

     

Weshalb hemmen Würmer Allergien? Parasiten als Immunologen

Parasitic worms survive within their immunocompetent hosts by modulating their immune system and by inhibiting inflammatory responses directed against the parasites. This immunomodulation has a spill over effect and also inhibits inflammatory responses originating from other causes. For this reason, persons who are infected with certain species of worms show a lower rate of allergic diseases as compared to persons who are free of parasites. In the same line, studies in mouse models revealed that many inflammatory diseases can be treated by worm infections. This effect is among others owing to specific proteins that are released by the worms. Such secreted immunomodulators, shaped by co‐evolution between parasites and their hosts, could become lead compounds for the development of new therapies against allergic and inflammatory diseases.     

Association between pygmy right whales (Caperea marginata) and areas of high marine productivity off Australia and New Zealand

Abstract

Opportunistic sightings and strandings of Caperea marginata (n=196) from the vicinity of Australia and New Zealand (1884 to early 2007) were used to relate geographic and temporal patterns to oceanographic and broad-scale climatic variability. Records were not uniformly distributed along the coast and more (69%) were from Australia than New Zealand. Seven coastal whale ‘hotspots’ were identified which accounted for 61% of records with locality data. Half of the hotspot records were from southeast (37) and northwest (20) Tasmania—others each had 9–15 events. Upwelling and/or high zooplankton abundance has been documented near all whale hotspots. Records of C. marginata occurred in all months, with 75% in spring and summer. Inter-annual variability showed broad agreement between increased whale records (usually in spring/summer) and strongly positive ‘Niño 3.4’ during 1980–1995 but not thereafter. Coastal upwelling and productivity increase during climatic phenomena such as El Niño and are likely to be quickly beneficial to plankton-feeding whales such as C. marginata.     

Saliva samples are a viable alternative to blood samples as a source of DNA for high throughput genotyping

ABSTRACT: BACKGROUND: The increasing trend for incorporation of biological sample collection within clinical trials requires sample collection procedures which are convenient and acceptable for both patients and clinicians. This study investigated the feasibility of using saliva-extracted DNA in comparison to blood-derived DNA, across two genotyping platforms: Applied Biosystems Taqman TM and Illumina Beadchip TM genome-wide arrays. METHOD: Patients were recruited from the Pharmacogenetics of Breast Cancer Chemotherapy (PGSNPS) study. Paired blood and saliva samples were collected from 79 study participants. The Oragene DNA Self-Collection kit (DNAgenotek(R)) was used to collect and extract DNA from saliva. DNA from EDTA blood samples (median volume 8 ml) was extracted by GenProbe, Livingstone, UK. DNA yields, standard measures of DNA quality, genotype call rates and genotype concordance between paired, duplicated samples were assessed. RESULTS: Total DNA yields were lower from saliva (mean 24 ug, range 0.2-52 ug) than from blood (mean 210 ug, range 58-577 ug) and a 2-fold difference remained after adjusting for the volume of biological material collected. Protein contamination and DNA fragmentation measures were greater in saliva DNA. 78/79 saliva samples yielded sufficient DNA for use on Illumina Beadchip arrays and using Taqman assays. Four samples were randomly selected for genotyping in duplicate on the Illumina Beadchip arrays. All samples were genotyped using Taqman assays. DNA quality, as assessed by genotype call rates and genotype concordance between matched pairs of DNA was high (>97%) for each measure in both blood and saliva-derived DNA. CONCLUSION: We conclude that DNA from saliva and blood samples is comparable when genotyping using either Taqman assays or genome-wide chip arrays. Saliva sampling has the potential to increase participant recruitment within clinical trials, as well as reducing the resources and organisation required for multicentre sample collection.     

AN INTERPRETATION OF DOSE-RESPONSE CURVES FOR LIGHT-INDUCED CELL ELONGATION IN FERN PROTONEMATA

Protonemata of Onoclea sensibilis and Diyopteris filix-mas elongate in response to both red and far-red light. The promotion caused by far-red is larger than that caused by red light. This phenomenon differs from a typical response to phytochrome, the photoreceptor pigment immediately suggested by the activity of red and far-red light. The phenomenon has been explained by two different hypotheses, one of which holds that phytochrome is solely responsible for the response, whereas the other postulates an interaction between phytochrome and P₅₈₀, a yellow-green light absorbing pigment, to account for the response. The hypothesis that phytochrome is the sole photoreceptor leads to some specific predictions concerning the shapes of the dose-response curves for light-induced protonema elongation. These predictions were tested with both continuous and short-term irradiation. In all instances saturating far-red light caused greater elongation than did saturating red light, and no dose of red light duplicated the activity of saturating far-red light. Other experiments tested the interactions of red and far-red light and the effects of different doses of yellow-green light on protonema elongation. The results of many of the experiments were not in agreement with the hypothesis that phytochrome is the sole photoreceptor, whereas they were in agreement with the assumption that filament elongation is controlled by both phytochrome and P₅₈₀.     

A ‘Problematic fossil’ revealed:Pycnoporidium ? eomesozoicum Flügel, 1972 (Late Triassic,Tethys)—not an enigmatic alga but a strophomenid brachiopod (Gosaukammerella n.g.)

Summary The microproblematicumPycnoporidium ? eomesozoicum Flügel, 1972, from Upper Triassic reefs of the Alpine-Mediterranean region, Turkey Oman and Iran (originally interpreted as possible alga) represents the type species of a new strophomenid brachiopod genus (Gosaukammerella n.g.). The genus is characterized by a very small, millimeter-sized plano-convex shell, whose ventral valve is attached to the substratum (mainly sponges) by symmetrically arranged outgrowths developing from a pseudopunctate, lamellose foliated shell wall and composed of densely spaced subparallel ‘tubes’ comparable with productide spines secreted by papillose extensions of the mantle.Gosaukammerella seems to be the only reliable candidate for the existence of post-Paleozoic strophomenid (productid ?) brachiopods. Gosaukammerella eomesozoica is restricted to possibly cryptic, shaded reef environments inhabited predominantly by sponges serving as substrates for micromorphic brachiopods.     

In situ hybridization of semithin Epon sections with BrdU labelled oligonucleotide probes

Summary We recently described a nonradioactive method for in situ hybridization with 5-bromo-2-deoxyuridine (BrdU) labelled oligonucleotide probes. An antibody to BrdU and immunocytochemistry were used in order to detect the hybridization signal. We have now applied this method to semithin Epon sections, in order to hybridize consecutive sections through single cells with different probes and to stain them with antibodies to neuropeptides. It could be shown that Epon embedding preserves mRNA well. In the present study we used a BrdU labelled synthetic oligonucleotide probe complementary to a fragment of the vasopressin precursor and an antibody to Arg-vasopressin. Vasopressin mRNA was demonstrable in a fraction of the vasopressin immunoreactive neurons in the magnocellular nuclei. In addition some of the magnocellular neurons showed either hybridization or vasopressin immunostaining only, perhaps indicating different stages of synthetic and secretory activity. The method described seems to be a valuable tool for studying synthetic activity in peptidergic neurons on a single cell level. The method might also have potential for in situ hybridization on the electronmicroscopical level.     

Maßgeschneiderte Mikroorganismen

Tailor‐made microorganisms Microbial diversity provides unlimited resources for the development of novel industrial processes and products. Since the beginning of the 20th century microorganisms have been successfully applied for the large scale production of bio‐based products. In recent years, modern methods of strain development and Synthetic Biology have enabled biotech engineers to design even more sophisticated and tailor‐made microorganisms. These microbes serve industrial processes for the production of bulk chemicals, enzymes, polymers, biofuels as well as plant‐derived ingredients such as Artemisinin in an ecologically and economically sustainable and attractive fashion. In the future, production of advanced biofuels, microbial fuel cells, CO₂ as feedstock and microbial cellulose are research topics as well as challenges of global importance. Continuous efforts in microbiology and biotechnology research will be pivotal for white biotechnology to gain more momentum in transforming the chemical industry towards a knowledge based bio‐economy.