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51.
Coregulation of beta-galactoside uptake and hydrolysis by the hyperthermophilic bacterium Thermotoga neapolitana 下载免费PDF全文
Regulation of the beta-galactoside transport system in response to growth substrates in the extremely thermophilic anaerobic bacterium Thermotoga neapolitana was studied with the nonmetabolizable analog methyl-beta-D-thiogalactopyranoside (TMG) as the transport substrate. T. neapolitana cells grown on galactose or lactose accumulated TMG against a concentration gradient in an intracellular free sugar pool that was exchangeable with external galactose or lactose and showed induced levels of beta-galactosidase. Cells grown on glucose, maltose, or galactose plus glucose showed no capacity to accumulate TMG, though these cells carried out active transport of the nonmetabolizable glucose analog 2-deoxy-D-glucose. Glucose neither inhibited TMG uptake nor caused efflux of preaccumulated TMG; rather, glucose promoted TMG uptake by supplying metabolic energy. These data show that beta-D-galactosides are taken up by T. neapolitana via an active transport system that can be induced by galactose or lactose and repressed by glucose but which is not inhibited by glucose. Thus, the phenomenon of catabolite repression is present in T. neapolitana with respect to systems catalyzing both the transport and hydrolysis of beta-D-galactosides, but inducer exclusion and inducer expulsion, mechanisms that regulate permease activity, are not present. Regulation is manifest at the level of synthesis of the beta-galactoside transport system but not in the activity of the system. 相似文献
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Junko Kitagawa Yoshimune Morita Miroslaw Makohonienko Katsuya Gotanda Kazuyoshi Yamada Hitoshi Yonenobu Ikuko Kitaba Yoshinori Yasuda 《Vegetation History and Archaeobotany》2016,25(6):525-540
Akita-sugi (Cryptomeria japonica, Japanese cedar that is grown in Akita) forests are among the most important for commercially valuable timber in Japan. Historically, these forests have been severely exploited, although now some parts of them are conserved. It is important to know the detailed history of the forests in order to utilize them sustainably in the future. This study analyzes the pollen in an annually laminated lake sediment core from Ichi-no-Megata on the Oga peninsula, Akita, Japan, to understand the history of Akita-sugi cedar forests. An age-depth model was developed based on the results of an accelerator mass spectrometer dating of 13 plant macrofossils from the surface to 422 cm in depth, the Towada-a tephra and other well-known event layers. The dominant pollen taxa were Cryptomeria and Fagus crenata by ad 1000. The first increase of Cryptomeria was detected around 1700 bc. By the 1st century ad, Cryptomeria forest was established. At that time, Cryptomeria was mixed with deciduous trees, mainly F. crenata. The pollen analysis found evidence that the main loss of woodland occurred during the 11th century ad, when forest lands were cleared for agriculture. Substantial natural forests nevertheless remained until the 16th century, after which forest resources were exhausted. Conservation and plantation activities took place later, but human activity in response to severe famines prevented the recovery of the forests. After the famine periods, the remaining forests recovered to their previous condition, but after World War II, the natural forests shrank further and plantation forests without deciduous trees were established over large areas. 相似文献
53.
Hassan Anwarul KM; Moriya Shigeki; Baumann Paul; Yoshikawa Hiroshi; Ogasawara Naotake 《DNA research》1996,3(6):415-419
Buchnera aphidicola is an intracellular prokaryote (endosymbiont)that lives in the body cavity of the aphid. Phylogenetic studiesindicated that it is closely related to Escherichia coli andmembers of Enterobacteria. The gene order of the region containingthe dnaA gene is well conserved in many bacteria. Seven genesof the endosymbiont of the aphid Schizaphis graminum, gyrB,dnaN, dnaA, rpmH, rnpA, yidD, and 60K, were found to be homologousin sequence and relative location to those of E. coli. We havefurther sequenced the region downstream of the 60K gene to elucidatethe boundary of the conserved region, and found that one moregene, thdF , is conserved. The comparison of gene organizationsof the dnaA region of the related bacteria supported the closephylogenetic relationship of B. aphidicola to E. coli. In addition,we have identified groES and groEL genesnext to the thdF gene.GroEL protein was reported to be expressed at an elevated levelin the endosymbionts of aphids, and is considered to play animportant role in their association with the aphid host. Comparisonof the structure of the groE operon with that of the endosymbiontof the aphid Acyrthosiphon pisum revealed the conservation ofa sequence resembling the E. coli consensus heat shock promoter,and this sequence may be responsible for the high expressionof the groEL gene in aphid endosymbionts. 相似文献
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There are two approaches to the discovery of enzyme mimics, that is identifying molecules that are able to bind substrate(s) and then catalyze reactions. The first approach, often inspired by enzymes themselves, utilises chemical knowledge and experience to design the catalyst. The other approach is to create a library and select the best host of a transition state analogue of the required reaction. 相似文献
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Susanna KP Lau Rachel YY Fan Gilman KM Wong Jade LL Teng Kong-Hung Sze Herman Tse Kwok-Yung Yuen Patrick CY Woo 《Cell & Bioscience》2011,1(1):1-17
Background
Laribacter hongkongensis is a Gram-negative, sea gull-shaped rod associated with community-acquired gastroenteritis. The bacterium has been found in diverse freshwater environments including fish, frogs and drinking water reservoirs. Using the complete genome sequence data of L. hongkongensis, we performed a comprehensive analysis of putative transport-related genes and genes related to chemotaxis, motility and quorum sensing, which may help the bacterium adapt to the changing environments and combat harmful substances.Results
A genome-wide analysis using Transport Classification Database TCDB, similarity and keyword searches revealed the presence of a large diversity of transporters (n = 457) and genes related to chemotaxis (n = 52) and flagellar biosynthesis (n = 40) in the L. hongkongensis genome. The transporters included those from all seven major transporter categories, which may allow the uptake of essential nutrients or ions, and extrusion of metabolic end products and hazardous substances. L. hongkongensis is unique among closely related members of Neisseriaceae family in possessing higher number of proteins related to transport of ammonium, urea and dicarboxylate, which may reflect the importance of nitrogen and dicarboxylate metabolism in this assacharolytic bacterium. Structural modeling of two C4-dicarboxylate transporters showed that they possessed similar structures to the determined structures of other DctP-TRAP transporters, with one having an unusual disulfide bond. Diverse mechanisms for iron transport, including hemin transporters for iron acquisition from host proteins, were also identified. In addition to the chemotaxis and flagella-related genes, the L. hongkongensis genome also contained two copies of qseB/qseC homologues of the AI-3 quorum sensing system.Conclusions
The large number of diverse transporters and genes involved in chemotaxis, motility and quorum sensing suggested that the bacterium may utilize a complex system to adapt to different environments. Structural modeling will provide useful insights on the transporters in L. hongkongensis. 相似文献59.
Singaram?Gopalakrishnan Napo?KM?Cheung Bill?WP?Yip Doris?WT?AuEmail author 《Frontiers in zoology》2013,10(1):78