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271.
Goel AK Jain M Kumar P Sarguna P Bai M Ghosh N Gopalan N 《Journal of microbiology (Seoul, Korea)》2011,49(2):280-284
Thirty-four Vibrio cholerae isolates collected from a cholera outbreak in Hyderabad, South India were found to belong to serogroup Ol biotype El Tor
serotype Ogawa. The genotype of all the isolates was confirmed by PCR assays. All the isolates were found PCR positive for
ctxAB, ompW, rflOl, rtxC, and tcpA genes. All the isolates but one harboured rstR
El Tor
allele. However, one isolate carried both rstR
EL Tor
as well as rstR
Classical
alleles. Cholera toxin (ctxB) genotyping of the isolates confirmed the presence of altered cholera toxin B of classical biotype in all the isolates. All
the isolates except VCH35 harboured an RS1-CTX prophage array on the large chromosome. The isolate VCH35 contained a tandem
repeat of classical CTX prophage on the small chromosome. The clonal relationship among the V. cholerae isolates as carried out by enterobacterial repetitive intergenic consensus sequences PCR, BOX PCR and randomly amplified
polymorphic DNA, uniformly showed a genetic relationship among the outbreak isolates. The results of this study suggest that
altered El Tor biotype V. cholerae with the classical cholera toxin gene are involved in cholera outbreaks in India. 相似文献
272.
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275.
Narender Reddy Emmadi Krishnaiah Atmakur Ganesh Kumar Chityal Sujitha Pombala Jagadeesh Babu Nanubolu 《Bioorganic & medicinal chemistry letters》2012,22(23):7261-7264
A series of fluorinated tetrahydropyrano[3,2-c]chromenes and dihydropyrano[3,2-b]pyran derivatives have been synthesized and their in vitro cytotoxic activities have been determined in cervical cancer cell line (HeLa), human breast adenocarcinoma cell line (MDA-MB-231 and MCF-7) and human alveolar adenocarcinoma cell line (A549). Compounds 4g, 4k, 4p showed a very potent activity against MDA-MB-231, and 4c, 4p showed promising activity against MCF-7, while compounds 4c, 4g, 4p showed moderate activity against HeLa. 相似文献
276.
Gopalan Soman Abraham T Kallarakal Dennis Michiel Xiaoyi Yang Nirmala Saptharishi Hengguang Jiang Steve Giardina John Gilly George Mitra 《MABS-AUSTIN》2012,4(1):84-100
Ch14.18 is a mouse-human chimeric monoclonal antibody to the disialoganglioside (GD2) glycolipid. In the clinic, this antibody has been shown to be effective in the treatment of children with high-risk neuroblastoma, either alone or in combination therapy. Extensive product characterization is a prerequisite to addressing the potential issues of product variability associated with process changes and manufacturing scale-up. Charge heterogeneity, glycosylation profile, molecular state and aggregation, interaction (affinity) with Fcγ receptors and functional or biological activities are a few of the critical characterization assays for assessing product comparability for this antibody. In this article, we describe the in-house development and qualification of imaged capillary isoelectric focusing to assess charge heterogeneity, analytical size exclusion chromatography with online static and dynamic light scattering (DLS), batch mode DLS for aggregate detection, biosensor (surface plasmon resonance)-based Fcγ receptor antibody interaction kinetics, N-glycoprofiling with PNGase F digestion, 2-aminobenzoic acid labeling and high performance liquid chromatography and N-glycan analysis using capillary electrophoresis. In addition, we studied selected biological activity assays, such as complement-dependent cytotoxicity. The consistency and reproducibility of the assays are established by comparing the intra-day and inter-day assay results. Applications of the methodologies to address stability or changes in product characteristics are also reported. The study results reveal that the ch14.18 clinical product formulated in phosphate-buffered saline at a concentration of 5 mg/ml and stored at 2–8°C is stable for more than five years.Key words: monoclonal antibodies, chimeric antibody, characterization assays, SEC-MALS, imaged cIEF, N-glycoprofiling, N-glycan analysis, FcγRIIIA:ch14.18 interaction, surface plasmon resonance, complement-dependent cytotoxicity 相似文献
277.
Tabashnik BE Morin S Unnithan GC Yelich AJ Ellers-Kirk C Harpold VS Sisterson MS Ellsworth PC Dennehy TJ Antilla L Liesner L Whitlow M Staten RT Fabrick JA Li X Carrière Y 《GM crops & food》2012,3(3):194-200
Evolution of resistance by pests can reduce the benefits of transgenic crops that produce toxins from Bacillus thuringiensis (Bt) for insect control. One of the world's most important cotton pests, pink bollworm (Pectinophora gossypiella), has been targeted for control by transgenic cotton producing Bt toxin Cry1Ac in several countries for more than a decade. In China, the frequency of resistance to Cry1Ac has increased, but control failures have not been reported. In western India, pink bollworm resistance to Cry1Ac has caused widespread control failures of Bt cotton. By contrast, in the state of Arizona in the southwestern United States, monitoring data from bioassays and DNA screening demonstrate sustained susceptibility to Cry1Ac for 16 y. From 1996-2005, the main factors that delayed resistance in Arizona appear to be abundant refuges of non-Bt cotton, recessive inheritance of resistance, fitness costs associated with resistance and incomplete resistance. From 2006-2011, refuge abundance was greatly reduced in Arizona, while mass releases of sterile pink bollworm moths were made to delay resistance as part of a multi-tactic eradication program. Sustained susceptibility of pink bollworm to Bt cotton in Arizona has provided a cornerstone for the pink bollworm eradication program and for integrated pest management in cotton. Reduced insecticide use against pink bollworm and other cotton pests has yielded economic benefits for growers, as well as broad environmental and health benefits. We encourage increased efforts to combine Bt crops with other tactics in integrated pest management programs. 相似文献
278.
The background concentration of selected alkali and alkaline earth metals (sodium, potassium, calcium and magnesium) in some macrophytes was explored in the wetland system of Keoladeo National Park, Bharatpur, India. Changes in the concentration of these elements in the course of macrophyte decomposition were also studied. The species selected were Paspalum distichum, Paspalidium punctatum, Cyperus alopecuroides, Pseudoraphis spinescens, Ipomoea aquatica, Neptunia oleracea and Hydrilla verticillata, which dominate the aquatic vegetation of the Park. Litterbag decomposition experiments were carried out with nylon bags of two different mesh sizes (0.14 and 0.375 mm) in the laboratory and in the field. Among the macrophytes, Hydrilla was the fastest decaying species with the lowest half-life (12.65 days) and Paspalidium the slowest with the highest half-life (385.08 days). Overall, the grasses had low decay rate and high half-life. Background concentration of Na, K, Ca and Mg varied among the plant species. During decomposition and towards the end of the experiment, Na, K and Ca gradually declined whereas Mg increased. The variation was significant (ANOVA, P <0.05) among metals and macrophytes. Na showed no correlation with the weight loss of decomposing macrophytes in the field or in the laboratory tanks. In the field, the K concentration, in contrast with the observations in the tanks, was negatively correlated with the biomass and positively correlated with Ca content. Ca concentration in the biomass was negatively correlated with the weight of the remaining biomass, while Mg was positively correlated with the biomass in the litterbags. 相似文献
279.
Functional genes of HIV-1 like the tat express proteins essential for viral survival and propagation. There are variations reported in levels of Tat transactivation among the different subtypes of HIV-1. This study looked at the amino acid differences in the different regions of Tat protein (exon 1) of subtype B and C strains of HIV-1 and tried to observe a molecular basis for protein function. HIV-1 sequences of subtype B (n=30) and C (n=60) strains were downloaded from HIV-1 Los Alamos data base. Among the 60 subtype C strain sequences, 30 each were from India and Africa. A HIV-1 Tat protein (exon 1) sequence, the consensus B and C sequence was obtained from the 'sequence search interface' in the Los Alamos HIV-1 sequence data. The sequences were visualized using Weblogo and the RNA binding regions of the three consensus sequences were also determined using BindN software program. Compared to subtype B, there was a high level of divergence in the auxiliary domain of tat exon 1 (amino acid positions 58- 69). The net charge of the subtype C (Indian) Tat protein (exon 1) auxiliary domain was -1.9 at pH 7 and it had an isoelectric point of 4.1. The net charge of the subtype C (African) auxiliary domain was -2.9 at pH 7 and it had an isoelectric point of 3.7 while the net charge of same region in subtype B was -0.9 at pH 7 with an isoelectric point of 4.9. The ratio of the hydrophilic residues to the total number of residues was 60% in the in both the Indian and African subtype C in the auxiliary domain while this was 50% in subtype B. The consensus subtype B sequence was found to have 36 RNA binding sites while subtype C (India) had 33 and subtype C (Africa) had 32 RNA binding sites. The HIV-1 Tat-TAR interaction is a potential target for inhibitors and being considered for its potential use in HIV-1 vaccines. Development of such inhibitor/vaccines would have to take into consideration the variation in amino acid sequence analyzed in this study as this could determine epitope presentation on MHC class I antigen for afferent immune response. 相似文献
280.
Matthew N. Davies Jagadeesh Bayry Elma Z. Tchilian Janakiraman Vani Melkote S. Shaila Emily K. Forbes Simon J. Draper Peter C. L. Beverley David F. Tough Darren R. Flower 《PloS one》2009,4(11)