Pollen diversity and its implications to the systematics of Poecilanthe (Fabaceae,Papilionoideae, Brongniartieae)

The small South-American genus Poecilanthe has a striking morphological diversity in leaf type, inflorescence, seed morphology and chemical composition. Recent phylogenetic work also shows that Poecilanthe is paraphyletic. Despite the importance of palynology to better understand morphological diversity and potentially inform evolutionary analyses, the pollen morphology of Poecilanthe and most of its close relatives is unknown. This study uses light and electronic microscopy to describe the pollen morphology of eight species of Poecilanthe and the four related genera Ormosia, Harpalyce, Clathrotropis and Cyclolobium. We found pollen grains colpate only in four species of Poecilanthe and Harpalyce brasiliana and colporate pollen grains in the other four Poecilanthe species and the other related genera (Ormosia, Clathrotropis and Cyclolobium). An identification key for pollen of all species is provided. Using principal component analyses (PCA) we found that pollen grains of the Poecilanthe have considerable diversity. However, only limited correspondence between the PCA clusters and the Poecilanthe clades was found, suggesting that pollinic characters do not reflect evolutionary history in this group.     

Multilocus phylogeography of the endemic and endangered angular angelshark (Squatina guggenheim) in the Southwest Atlantic Ocean

Hydrobiologia - The angular angelshark (Squatina guggenheim) is a coastal endangered angel shark from the Southwest Atlantic Ocean and one of the major bycatch victims. Despite major concerns about...     

Nipah virus uses leukocytes for efficient dissemination within a host

Nipah virus (NiV) is a recently emerged zoonotic paramyxovirus whose natural reservoirs are several species of Pteropus fruit bats. NiV provokes a widespread vasculitis often associated with severe encephalitis, with up to 75% mortality in humans. We have analyzed the pathogenesis of NiV infection, using human leukocyte cultures and the hamster animal model, which closely reproduces human NiV infection. We report that human lymphocytes and monocytes are not permissive for NiV and a low level of virus replication is detected only in dendritic cells. Interestingly, despite the absence of infection, lymphocytes could efficiently bind NiV and transfer infection to endothelial and Vero cells. This lymphocyte-mediated transinfection was inhibited after proteolytic digestion and neutralization by NiV-specific antibodies, suggesting that cells could transfer infectious virus to other permissive cells without the requirement for NiV internalization. In NiV-infected hamsters, leukocytes captured and carried NiV after intraperitoneal infection without themselves being productively infected. Such NiV-loaded mononuclear leukocytes transfer lethal NiV infection into naïve animals, demonstrating efficient virus transinfection in vivo. Altogether, these results reveal a remarkable capacity of NiV to hijack leukocytes as vehicles to transinfect host cells and spread the virus throughout the organism. This mode of virus transmission represents a rapid and potent method of NiV dissemination, which may contribute to its high pathogenicity.     

Effects of acute and chronic UV-B exposure on a green alga: a continuous culture study using a computer-controlled dynamic light regime

The green alga Selenastrum capricornutum was grown in a specially developed continuous culture system to study long-term effects of chronic UV-B exposure. The new system improves upon previous laboratory culture approaches. It is demonstrated that short-term experiments underestimate UV-B effects. It is also shown that photoinhibition cannot explain the effects under chronic exposure. Under both nutrient-replete and phosphorus-limiting conditions a UV-B mediated delay in cell division rate and an increase in the cellular content of proteins, carbohydrates and chlorophyll a was measured. Transition experiments showed that complete acclimatisation to UV-B took several cell cycles. DNA damage appears to be the major cause of the observed long-term UV-B effects.     

The guardians of inherited oncogenic vulnerabilities

Similar to seemingly maladaptive genes in general, the persistence of inherited cancer‐causing mutant alleles in populations remains a challenging question for evolutionary biologists. In addition to traditional explanations such as senescence or antagonistic pleiotropy, here we put forward a new hypothesis to explain the retention of oncogenic mutations. We propose that although natural defenses evolve to prevent neoplasm formation and progression thus increasing organismal fitness, they also conceal the effects of cancer‐causing mutant alleles on fitness and concomitantly protect inherited ones from purging by purifying selection. We also argue for the importance of the ecological contexts experienced by individuals and/or species. These contexts determine the locally predominant fitness‐reducing risks, and hence can aid the prediction of how natural selection will influence cancer outcomes.     

Evolutionary and biogeographical approach on Australoheros angiru (Cichlidae) from lagoons in a dividing plateau between the basins of the Iguassu River and the Uruguay River,Brazil

Australoheros is represented by species of Cichlidae spread over different Brazilian river systems. Individuals of Australoheros angiru were collected in isolated lagoons at 950 m of altitude in a dividing plateau between the basins of the Iguassu River and the Uruguay River, located in the São Lourenço do Oeste region (Santa Catarina State), and subject to basic and molecular cytogenetic analyzes. Moreover, a review about the occurrence and collections sites of A. angiru was used to the clarification of biogeographical issues of Australoheros and other species of fish that are common between the basins of the Uruguay River and Iguassu River. The analysis by conventional staining with Giemsa found a diploid number of 48 chromosomes (18 submetacentric + 30 subtelocentric/acrocentric) for males and females, without sex chromosome differentiation. The nucleolar organizing regions identified by silver impregnation and by fluorescence in situ hybridization with 18S rDNA probes showed to be simple, located on the end of the short arm of subtelocentric chromosome pair 15. Heterochromatin was observed in the centromeric region of most of the chromosomes of the complement, in addition to coincide with the nucleolar organizing regions. The data presented in this study are the first reports on the location of sites of 5S rDNA for Australoheros, being located in interstitial position on the long arm of subtelocentric chromosome pair 11. The basic and molecular cytogenetic data presented here contribute to the better understanding of chromosomal evolution of Cichlidae, act as interesting tools for taxonomy and phylogeny of the group, in addition to help in understanding the dispersion of A. angiru between the two hydrographic basins.     

Spirilloxanthin is released by detergent from Rubrivivax gelatinosus reaction center as an aggregate with unusual spectral properties

A preparation containing spirilloxanthin has been isolated from Rubrivivax gelatinosus SC2, a mutant devoid of the reaction center-associated tetraheme cytochrome c, after solubilisation of membranes with lauryl-di-methyl-amine oxide. It was purified by ammonium sulfate precipitation and gel filtration, and analyzed by SDS-gel electrophoresis. Spirilloxanthin was shown to be aggregated in large particles (apparent M_W > 600 kDa) and was not associated with a specific protein. This aggregate was characterized by absorption, circular dichroism and resonance Raman spectroscopies. The absorption spectrum contained two UV bands at 370 and 300 nm, and did not present the visible bands of spirilloxanthin, which however reappeared when spirilloxanthin was extracted from the aggregate with organic solvents. Resonance Raman spectra indicated that at least four different populations of spirilloxanthin were present in the preparation as a mixture of different trans and cis configurations. These properties are similar to those described for a so-called carotenoprotein solubilized with sodium dodecyl sulfate from Rhodospirillum rubrum membranes [Schwenker et al. (1974) Biochim Biophys Acta 351: 246-260; Kito et al. (1983) Photochem Photobiophys 5: 209-217]. We further observed absorption spectra of pure spirilloxanthin dissolved in mixtures of water, polar solvents and detergent, in the absence of protein, resembling those of the.aggregate. We conclude that the aggregate is not a carotenoprotein, but rather an artefact due to the release of spirilloxanthin from the reaction center, leading to the isomerization and association of spirilloxanthin molecules in a detergent particle. We propose the same interpretation for the complex isolated from Rhodospirillum rubrum.     

Prokaryotic evolution and the tree of life are two different things

Background

The concept of a tree of life is prevalent in the evolutionary literature. It stems from attempting to obtain a grand unified natural system that reflects a recurrent process of species and lineage splittings for all forms of life. Traditionally, the discipline of systematics operates in a similar hierarchy of bifurcating (sometimes multifurcating) categories. The assumption of a universal tree of life hinges upon the process of evolution being tree-like throughout all forms of life and all of biological time. In multicellular eukaryotes, the molecular mechanisms and species-level population genetics of variation do indeed mainly cause a tree-like structure over time. In prokaryotes, they do not. Prokaryotic evolution and the tree of life are two different things, and we need to treat them as such, rather than extrapolating from macroscopic life to prokaryotes. In the following we will consider this circumstance from philosophical, scientific, and epistemological perspectives, surmising that phylogeny opted for a single model as a holdover from the Modern Synthesis of evolution.

Results

It was far easier to envision and defend the concept of a universal tree of life before we had data from genomes. But the belief that prokaryotes are related by such a tree has now become stronger than the data to support it. The monistic concept of a single universal tree of life appears, in the face of genome data, increasingly obsolete. This traditional model to describe evolution is no longer the most scientifically productive position to hold, because of the plurality of evolutionary patterns and mechanisms involved. Forcing a single bifurcating scheme onto prokaryotic evolution disregards the non-tree-like nature of natural variation among prokaryotes and accounts for only a minority of observations from genomes.

Conclusion

Prokaryotic evolution and the tree of life are two different things. Hence we will briefly set out alternative models to the tree of life to study their evolution. Ultimately, the plurality of evolutionary patterns and mechanisms involved, such as the discontinuity of the process of evolution across the prokaryote-eukaryote divide, summons forth a pluralistic approach to studying evolution.

Reviewers

This article was reviewed by Ford Doolittle, John Logsdon and Nicolas Galtier.