Global analysis of satellite tracking data shows that adult green turtles are significantly aggregated in Marine Protected Areas

Aim Tracking technologies are often proposed as a method to elucidate the complex migratory life histories of migratory marine vertebrates, allowing spatially explicit threats to be identified and mitigated. We conducted a global analysis of foraging areas of adult green turtles (Chelonia mydas) subject to satellite tracking (n= 145) and the conservation designation of these areas according to International Union for Conservation of Nature criteria. Location The green turtle has a largely circumtropical distribution, with adults migrating up to thousands of kilometres between nesting beaches and foraging areas, typically in neritic seagrass or algal beds. Methods We undertook an assessment of satellite tracking projects that followed the movements of green turtles in tropical and subtropical habitats. This approach was facilitated by the use of the Satellite Tracking and Analysis Tool ( http://www.seaturtle.org ) and the integration of publicly available data on Marine Protected Areas (MPAs). Results We show that turtles aggregate in designated MPAs far more than would be expected by chance when considered globally (35% of all turtles were located within MPAs) or separately by ocean basin (Atlantic 67%, Indian 34%, Mediterranean 19%, Pacific 16%). Furthermore, we show that the size, level of protection and time of establishment of MPAs affects the likelihood of MPAs containing foraging turtles, highlighting the importance of large, well‐established reserves. Main conclusions Our findings constitute compelling evidence of the world‐wide effectiveness of extant MPAs in circumscribing important foraging habitats for a marine megavertebrate.     

Using satellite tracking to optimize protection of long-lived marine species: olive ridley sea turtle conservation in Central Africa

Tractable conservation measures for long-lived species require the intersection between protection of biologically relevant life history stages and a socioeconomically feasible setting. To protect breeding adults, we require knowledge of animal movements, how movement relates to political boundaries, and our confidence in spatial analyses of movement. We used satellite tracking and a switching state-space model to determine the internesting movements of olive ridley sea turtles (Lepidochelys olivacea) (n = 18) in Central Africa during two breeding seasons (2007-08, 2008-09). These movements were analyzed in relation to current park boundaries and a proposed transboundary park between Gabon and the Republic of Congo, both created to reduce unintentional bycatch of sea turtles in marine fisheries. We additionally determined confidence intervals surrounding home range calculations. Turtles remained largely within a 30 km radius from the original nesting site before departing for distant foraging grounds. Only 44.6 percent of high-density areas were found within the current park but the proposed transboundary park would incorporate 97.6 percent of high-density areas. Though tagged individuals originated in Gabon, turtles were found in Congolese waters during greater than half of the internesting period (53.7 percent), highlighting the need for international cooperation and offering scientific support for a proposed transboundary park. This is the first comprehensive study on the internesting movements of solitary nesting olive ridley sea turtles, and it suggests the opportunity for tractable conservation measures for female nesting olive ridleys at this and other solitary nesting sites around the world. We draw from our results a framework for cost-effective protection of long-lived species using satellite telemetry as a primary tool.     

Recovery of the South Atlantic’s largest green turtle nesting population

Although many species of marine mega-vertebrates are threatened as a result of human activity, some populations are showing promising signs of recovery following decades of protection. In this study, we report on the status of the South Atlantic’s largest green turtle (Chelonia mydas) nesting aggregation at Ascension Island, 70 years after legal protection and the cessation of commercial turtle harvesting that decimated the population. Using a monitoring dataset spanning 36 years, we modelled long-term trends in nesting activity at both a rookery level and across individual nesting beaches and beach clusters. Since monitoring began in 1977, the average number of green turtle clutches deposited annually at Ascension Island has increased sixfold, from approximately 3,700 to 23,700; a trend that has been accompanied by a significant decrease in the average size of nesting females. Interestingly, however, rates of increase in nesting activity have varied dramatically among nesting beaches, ranging from 0.4 to 6 % growth per annum. More than 97 % of this variation could be explained by distance from the main human settlement of Georgetown—the historic centre of turtle harvesting—with beaches closer to Georgetown experiencing the most rapid growth. More rapid population growth close to human centres seems counterintuitive, but may reflect the more intensive depletion of these accessible, local stocks during the harvesting era. Overall, the Ascension Island green turtle population appears to be recovering strongly, mirroring positive trends for this species across many parts of its geographic range. While not a cause for complacency, these trends are encouraging and demonstrate the capacity of marine megafauna to rebound when anthropogenic pressures are alleviated through conservation action.     

DNMT3B7 Expression Promotes Tumor Progression to a More Aggressive Phenotype in Breast Cancer Cells

Epigenetic changes, such as DNA methylation, have been shown to promote breast cancer progression. However, the mechanism by which cancer cells acquire and maintain abnormal DNA methylation is not well understood. We have previously identified an aberrant splice form of a DNA methyltransferase, DNMT3B7, expressed in virtually all cancer cell lines but at very low levels in normal cells. Furthermore, aggressive MDA-MB-231 breast cancer cells have been shown to express increased levels of DNMT3B7 compared to poorly invasive MCF-7 cells, indicating that DNMT3B7 may have a role in promoting a more invasive phenotype. Using data gathered from The Cancer Genome Atlas, we show that DNMT3B7 expression is increased in breast cancer patient tissues compared to normal tissue. To determine the mechanism by which DNMT3B7 was functioning in breast cancer cells, two poorly invasive breast cancer cell lines, MCF-7 and T-47D, were stably transfected with a DNMT3B7 expression construct. Expression of DNMT3B7 led to hypermethylation and down-regulation of E-cadherin, altered localization of β-catenin, as well as increased adhesion turnover, cell proliferation, and anchorage-independent growth. The novel results presented in this study suggest a role for DNMT3B7 in the progression of breast cancer to a more aggressive state and the potential for future development of novel therapeutics.     

Phenotypically linked dichotomy in sea turtle foraging requires multiple conservation approaches

Marine turtles undergo dramatic ontogenic changes in body size and behavior, with the loggerhead sea turtle, Caretta caretta, typically switching from an initial oceanic juvenile stage to one in the neritic, where maturation is reached and breeding migrations are subsequently undertaken every 2-3 years. Using satellite tracking, we investigated the migratory movements of adult females from one of the world's largest nesting aggregations at Cape Verde, West Africa. In direct contrast with the accepted life-history model for this species, results reveal two distinct adult foraging strategies that appear to be linked to body size. The larger turtles (n = 3) foraged in coastal waters, whereas smaller individuals (n = 7) foraged oceanically. The conservation implications of these findings are profound, with the population compartmentalized into habitats that may be differentially impacted by fishery threats in what is a global fishing hotspot. Although the protection of discrete areas containing coastal individuals may be attainable, the more numerous pelagic individuals are widely dispersed with individuals roaming over more than half a million square kilometers. Therefore, mitigation of fisheries by-catch for sea turtles in the east Atlantic will likely require complex and regionally tailored actions to account for this dichotomous behavior.     

Atlas – a data warehouse for integrative bioinformatics

Background  

We present a biological data warehouse called Atlas that locally stores and integrates biological sequences, molecular interactions, homology information, functional annotations of genes, and biological ontologies. The goal of the system is to provide data, as well as a software infrastructure for bioinformatics research and development.     

Biphasal long-distance migration in green turtles

Sea turtles have recently been shown to have the sensory ability to use magnetic information for guidance in the open ocean, although the importance of different potential navigational cues remains unknown. Between May and August 2001, we satellite-tracked green turtles, Cheloniamydas, during their >2000-km postnesting migration from Ascension Island to Brazil, following five individuals both during their transoceanic crossing and while on the Brazilian coast. None of the turtles travelled directly to its final destination but, instead, there were extended (up to 792 km) movements along the coast after the oceanic crossings. The extent of movement along the coast was unrelated to the oceanic crossing route. For example, individuals whose final destination was in the north of Brazil did not follow a more northerly oceanic crossing than those with a more southerly final destination. These observations show that green turtles returning from Ascension Island do not swim directly to their final destination, but instead conduct migration in two distinct phases: a fairly direct open ocean crossing, following which they turn north or south along the coast to reach their final destination. This long-distance migration may therefore be conducted without turtles needing to resort to sophisticated navigational skills. These previously unidentified long coastal movements may heighten the risk of turtles being captured by fishermen. Copyright 2002 The Association for the Study of Animal Behaviour. Published by Elsevier Science Ltd. All rights reserved.     

Molecular characterization of KLHL3, a human homologue of the Drosophila kelch gene

The Drosophila kelch protein is a structural component of ring canals and is required for oocyte maturation. Here, we report the cloning and genomic structure of a new human homologue of kelch, KLHL3. At the amino acid level, KLHL3 shares 77% similarity with Drosophila kelch and 89% similarity with Mayven (KLHL2), another human kelch homolog. The approximately 6.5-kb mRNA has a single open reading frame encoding a protein of 587 amino acids with a predicted molecular mass of 650 kDa. Like kelch and KLHL2, the KLHL3 protein contains a poxvirus and zinc finger domain at the N-terminus and six tandem repeats (kelch repeats) at the C-terminus. At least three isoforms, which differ in the length of the N-terminus, are produced and may be the result of alternative promoter usage. We also identified alternative polyadenylation sites and alternative splicing; thus, as many as 12 mRNA variants and six putative protein isoforms could be produced. The KLHL3 gene is mapped to human chromosome 5, band q31, contains 17 exons, and spans approximately 120 kb of genomic DNA. KLHL3 maps within the smallest commonly deleted segment in myeloid leukemias characterized by a deletion of 5q; however, we detected no inactivating mutations of KLHL3 in malignant myeloid disorders with loss of 5q.